Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glossina_20palpalis_20gambiensis_20[genbank_20GCA_5F000818775.1_2020 15-01-15] 3,926 sequences; 380,104,241 total letters Query= NC_001611.1 Length=185578 Score E Sequences producing significant alignments: (Bits) Value seq197 531 6e-146 seq961 471 5e-128 seq362 466 2e-126 seq158 266 4e-66 >seq197 Length=390979 Score = 531 bits (588), Expect = 6e-146 Identities = 1408/2130 (66%), Gaps = 44/2130 (2%) Strand=Plus/Minus Query 52799 TTGTCCAATGTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCC 52858 || || | ||| || || ||||| | ||| || || || |||||| ||||| || Sbjct 299261 TTATCGACTGTAAAATGTGTGGGATTCGCTGCTGGCTTTGTTTTTAGATAATACATACCG 299202 Query 52859 GTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTTGTTAGTTTGGAATAACTCGGA 52918 || |||| |||| ||||||| |||||||| ||| | | ||| |||||| || Sbjct 299201 GTCTTTAAACCGGCTTTCCATCCATAAAAATGTATAGAAGACAATTTACCATAACTAGGT 299142 Query 52919 TCTGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCC 52978 || |||| || ||||| | ||||| ||||| |||||||| || || | || |||||| Sbjct 299141 TCAGCTACGTGTATATTGAATGATTGGCTTTGGTCGATGAAAGCACCGCGATCGGCAGCC 299082 Query 52979 ATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCT 53038 || || ||| | | || | ||||||||||| |||||||| | | || ||| Sbjct 299081 ATGTTAATGGTTGATTTCACCGAAATTTCCCAAACCGTTTTATACAATTCTTTTATACTA 299022 Query 53039 TCTGGAAGG---TTTGTATTCTGAATAGATCCACCATCTACCATAATCCTATTCTTGATC 53095 || || | | | | || || || || || | || | ||| || || || || Sbjct 299021 TCAGGTATGGCCTCAATGTTTTGTATTGAGCCGCGATGTGCCAATATTAAGTTTTTCATG 298962 Query 53096 TCATCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGA 53155 ||||||||||| | || || ||| || | || | ||| |||| || || | Sbjct 298961 TCATCATTCCAAAGGCGCAATTCAGTCAAATCTTTGAGCAAATGATGATTGACGACAATA 298902 Query 53156 AATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACAGACTCA 53215 ||||| || |||||||| | || ||||||| || || ||||| || | |||||| Sbjct 298901 AATTCACCGGACAATACACGTCGTGTGTAAACGTTTGACGTGTACGGCTCAAAAGACTCG 298842 Query 53216 TTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTT 53275 ||||| || | |||||||||||| || || || ||||| ||||| |||| || ||| Sbjct 298841 TTATTACCAAGAATTTGAGCAGTGGACGCGGTAGGCATTGGTGCTACCAGCAAGGAATTG 298782 Query 53276 CTAAGACCGTATGTTCTGATTTTATCTTTTAGAGGTTCCCAATTCCAAAGATCCGACGGT 53335 | | || || | | || | ||||| |||| ||||||||| ||||| | || Sbjct 298781 CGCACTCCATAACTCTTAATGTCGTCTTTAAGAGCCGACCAATTCCATAGATCAGTAGGC 298722 Query 53336 ACAACNNNNNNNNNNNNNNNTTGTAGAATACCGTTACTGGC-GTACGATCCTACATATGT 53394 ||| ||||| || ||||| | | || | ||| ||||||| Sbjct 298721 GTTTTATCCCACATATCATATTGAAGAATGCCTTTACTAACTGGACTA-CCTTCATATGT 298663 Query 53395 ATCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGTAATAAAT 53454 ||||| || || | | | || | |||||||| |||||||| ||||| ||||| || Sbjct 298662 TTCGTAAGGACCGTATTGTTTGGCCAACTCACAACTAGCCTCTAAAGCACCATAATATAT 298603 Query 53455 GGTTTCGAAGATCTTCTTATTTAGATCTTGT-GCTTCCAGGCTATCAAATGGATAATTTA 53513 |||||| || || | ||||||| | | | || | | ||| ||| | || ||| | Sbjct 298602 GGTTTCAAAAATTTGTTTATTTA-AGCGAGCAGCATTCTCGCTTTCATAGGGGTAACGCA 298544 Query 53514 AGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTAT 53573 | ||| | ||||| || |||||||| ||||| |||||||| || | ||| | || Sbjct 298543 TTAAAATTAGTGCGTCAGCAAATCCTTGGACACCTATACCGATTGGACGATGACGTAAAT 298484 Query 53574 TAGAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGGTTTC 53633 |||| ||| ||||| || | ||||||||||| | || || || || || || |||| Sbjct 298483 TAGATTTTTTGGCTTCCGGCAGCGGATAATAATTGACGTCGATTATCTTGTTAAGATTTC 298424 Query 53634 TGACAATTA-CTTTGACCACATCCTTCAGTTTGAGAAAATCAAATTGTCCATCTATT--- 53689 | || | ||||| | || || |||||||| | |||||| ||||| |||| | Sbjct 298423 TTGTTATAAGCTTTG-CAACTTCTTTCAGTTTCTGGAAATCATATTGTTTATCTGTCGTC 298365 Query 53690 ACAAACATGTTCAATGCAATAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCA 53749 || ||||| |||| ||||| || |||||||| ||||| |||| || | ||| || | Sbjct 298364 ACGAACATATTCACCGCAATTGAGGCCAGATTGCAAACTGCTATTTCCTCAGCCGACGTA 298305 Query 53750 TATTGTATTATCTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTA 53809 |||| | || || || || | ||||| || || || || || | ||| ||||||||| Sbjct 298304 TATTCGACAATTTCTGTACACAAGTTACTGCATTTTATTGTGCCAACATTCTGTTGATTA 298245 Query 53810 CTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGCGTACCAGTTTCAATCTGGG-A 53868 || || ||||| ||||| || ||||| ||| | || || || || || | |||| | Sbjct 298244 CTTTTGCGATTACAAGCATCTTTGTAAAGCATGTAAGGAGTTCCGGTCTCTAGTTGGGCA 298185 Query 53869 TTCTATAATCGCTTTCCAGACGACACGAGCCTTTATTATAGATTTGTATCTCTTTTCTCT 53928 | ||| | || ||| | ||||||| |||||| | ||| | || |||| | || Sbjct 298184 CTGCATATT-GCGAACCACAACTCACGAGCTTTTATTGT---TTTAT-TCGCTTTACCCT 298130 Query 53929 ----TTCGTATAGTGTATACAATCGTTCAAACTCGTCTCCCCAAACATTGTCCAATCCAG 53984 ||| ||| | | |||||| ||||| | |||||| | |||| ||||| |||| Sbjct 298129 CGTCTTCATATTTTATGTACAATTTATCAAATTTGTCTCCATATACATCTTCCAAGCCAG 298070 Query 53985 GACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGA 54044 | |||| || || ||||| || ||||| | | ||| | | ||||| |||||| || | Sbjct 298069 GGCATTTATGGGGGCACATTAAAGACCAATGCTCATCAGCTTCCACTCTTTTCATGAATA 298010 Query 54045 GATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTAT 54104 ||| || ||||| ||||| | ||||| ||| | | | || |||||| || || |||| Sbjct 298009 AATCTGGTATCCACAGAGCAAAAAATAAATCCCGTGCACGATCTTCCTCTTTGCCCGTAT 297950 Query 54105 TCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGTCA 54164 ||||||| | || || || | | |||||| | ||||| ||||| ||||| || | | Sbjct 297949 TCTTTTTCAAGTCAAGAAATTCGAAAATATCTGCGTGCCAAGGTTCTAAGTAGATAGCAA 297890 Query 54165 TAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTC 54224 | || |||| | || | |||| || || | || || || | || | Sbjct 297889 GTGCACCTCTACGTTGTCTGCCATCTTGATGTACATAACAGGCAAGATTGTTGAAGACGC 297830 Query 54225 TCAACATTGGAATAATACCATTGGATGCACCATTGGTCCCGGAGATATAGCTTCCACTGG 54284 |||||| |||| || |||||| ||| | ||||| || ||||| || | | || | | Sbjct 297829 GCAACATAGGAACAAGACCATTCGATACGCCATTAGTACCGGATATCTTCGTACCTTTTG 297770 Query 54285 CACGAAT--ATTACTAATTGATAGACCTATCCCCCCTGCCATTTTAGAGATTAATGCGCA 54342 | || || | | ||| ||| |||| || || | | ||| || ||| || || Sbjct 297769 CTCGTATGCAATGGACATT--CAGAGCTATGCCACCCGTCGATTTGGAAATTTCAGCACA 297712 Query 54343 TCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCAT-GTTAAGTAGAAAAC 54401 | | ||| | | | | ||||| || || || ||| ||| ||||| || |||| Sbjct 297711 TTGCCTTACAGCCTTAAAAATGCCATCAATGGAGTCTTCCGGCATCGTTAACAAG-AAAC 297653 Query 54402 AGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAA 54461 || |||| ||| | ||| | || | ||| |||||| || | ||||| || || | Sbjct 297652 AGGATGACAGTTGCGGGCGAATTGTAGCAGCACCAAATAAAGTTGAGGAAGCATGAGTGA 297593 Query 54462 ACCATTTTTCAGAAAGTAGATTGTACGTCTCGATAGCTGAGTCTATATCCCATTGATGAA 54521 | | || || | |||||||| || |||||||||| || || || |||| Sbjct 297592 AGTAACGCTCCGACATGAGATTGTAAGTTTCGATAGCTGCCTCAATGTCGTCGCCGTGAA 297533 Query 54522 TTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTT 54581 | || | ||||||||||||||||| || || || | || || || || || || | Sbjct 297532 TGCCAATGGCGACACGCATTAACATATGTTGTGGCCGCTCCACAATTTTCCCATTAATCT 297473 Query 54582 TCAGCAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA--TGAAAAGTCTCG 54639 | | ||| || || ||| || ||||| || |||||| | ||||| ||||| || || Sbjct 297472 TTAACAAATAAGACCGTTCTAATGTTTTGAAGCCAAAAAAATTGTAACTGAAA--TCGCG 297415 Query 54640 TTCGTAAATAATAACTGAGTTGAGTTTATCCTTATATTTGTTAACTACAT--CCATGGTA 54697 || |||||||| | || || ||| ||| || | || || || | |||||| Sbjct 297414 ATCATAAATAATGGCCGAATTTAGTCGATCAGCATGCTCTTTTACAACCTTGTAATGGTA 297355 Query 54698 ATACTTGAAATAATCGGAGAATGTTTCCCATTTTTAGGATTGACATAGTTAAATAAATCC 54757 || ||| ||||| || ||| | ||||| || ||| || | || ||| Sbjct 297354 AT--CTGATATAATAGGCGAAGGACAGCCATT------ATCTTCATTGTGATGTAGATCA 297303 Query 54758 TTCATCACTTCACTAAATAGtttttttGTTTCTTTGTGTAGATTTGATACGGCTATTCTA 54817 | ||||||||| |||| ||| ||||||||||| || | |||||||| || || | Sbjct 297302 CTTATCACTTCAGAGAATACTTTCTTTGTTTCTTTATGCAAGTTTGATACAGCAATACGG 297243 Query 54818 GCGGCTAGAATGGCATAATCCGGATGTTGTGTAGTACAAG-TGGCTGCTATTTCGGCTGT 54876 ||||||| ||| ||||| ||||| || | || || || | ||| || ||||||| | Sbjct 297242 GCGGCTAAAATAGCATAGTCCGGGTGATCGGTGGT-CATGCAGGCCGCAGTTTCGGCAGC 297184 Query 54877 CAGAGTGTCCAATTCTACCGTTGTTACTCC 54906 | | | ||||||||| ||| || || || Sbjct 297183 TAAATTATCCAATTCTTGCGTGGTGACGCC 297154 >seq961 Length=34630 Score = 471 bits (522), Expect = 5e-128 Identities = 1355/2068 (66%), Gaps = 46/2068 (2%) Strand=Plus/Plus Query 52799 TTGTCCAATGTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCC 52858 || || | ||| ||||| |||||| | ||| || || || | ||| || ||||| || Sbjct 3248 TTATCGACTGTAAATTGTATGGGATTTGCTGCTGGCTTTGTTCTTAGGTAATACATACCG 3307 Query 52859 GTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTTGTTAGTTTGGAATAACTCGGA 52918 ||||| | |||| ||||||| |||||||| ||| | || ||| |||||| || Sbjct 3308 GTTTTCAAACCGGCCTTCCATCCATAAAAATGTATAGAAGATAATTTACCATAACTAGGT 3367 Query 52919 TCTGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCC 52978 || |||| || || || | ||||||||||| |||||||| || || | || ||||| Sbjct 3368 TCAGCTACGTGTATGTTAAACGATTGACTTTGGTCGATGAAAGCGCCGCGATCAACAGCC 3427 Query 52979 ATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCT 53038 || || ||| | | ||| | ||||||||||| |||||||| | | || || Sbjct 3428 ATGTTAATGGTTGATTTTACCGAAATTTCCCAAACCGTTTTATATAATTCTTTTATGCTG 3487 Query 53039 TCTGGAAGG--TTTG-TATTCTGAATAGATCCACCATCTACCATAATCCTATTCTTGATC 53095 || || | | || | | || || || || || | || | ||| || || || || Sbjct 3488 TCAGGTATGGCTTCGATGTTTTGTATTGAGCCGCGATGTGCCAATATTAAGTTTTTCATG 3547 Query 53096 TCATCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGA 53155 | ||||||||| | || || ||| || |||| | ||| |||| || || | Sbjct 3548 TTATCATTCCAAAGGCCCAATTCAGTCAAATCTTTAAGCAAATGATGATTGACCACGATA 3607 Query 53156 AATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACAGACTCA 53215 || || ||||||| ||| | || ||||||| || || || || || | |||||| Sbjct 3608 AACTCACCAGACAGTACGCGTCGTGTGTAAACGTTTGAAGTGTATGGCTCAAAAGACTCG 3667 Query 53216 TTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTT 53275 || || || | |||||||||||| || || || ||||| || || |||| ||| ||| Sbjct 3668 TTGTTACCAAGAATTTGAGCAGTAGACGCCGTAGGCATTGGAGCTACCAGCAAAGAATTG 3727 Query 53276 CTAAGACCGTATGTTCTGATTTTATCTTTTAGAGGTTCCCAATTCCAAAGATCCGACGGT 53335 | | || || || | || | ||||| |||| ||||||||| ||||| | || Sbjct 3728 CGCACTCCATAACTTTTAATGTCGTCTTTAAGAGCCGACCAATTCCATAGATCAGTAGGC 3787 Query 53336 ACAACNNNNNNNNNNNNNNNTTGTAGAATACCGTTACTGGC-GTACGATCCTACATATGT 53394 ||| || ||||| ||||| | | || | ||| |||| || Sbjct 3788 GTTTTATCCCACATATCATATTGAAGGATACCTTTACTAACTGGACTA-CCTTCATAGGT 3846 Query 53395 ATCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGTAATAAAT 53454 ||||| || || | || | || | ||||||||| || ||||| ||||| ||||| || Sbjct 3847 TTCGTACGGACCGTACTGTTTGGCCAATTCACAACTAGCTTCTAAGGCACCATAATATAT 3906 Query 53455 GGTTTCGAAGATCTTCTTATTTAGATCTTGTG---CTTCCAGGCTATCAAATGGATAATT 53511 ||||| || || | ||||||| | | || ||| | ||| ||| | |||||| Sbjct 3907 TGTTTCAAAAATTTGTTTATTTA-AGCGTGCAGCACTTTC--GCTTTCATAGGGATAACG 3963 Query 53512 TAAGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTT 53571 | | ||| | ||||| || |||||||| ||||| | ||| || || | ||| | Sbjct 3964 CATTAAAATTAGTGCGTCAGCAAATCCTTGGACACCTAAACCAATTGGACGATGACGAAA 4023 Query 53572 ATTAGAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGGTT 53631 |||||| || | ||| | | ||||| ||||| | ||| || || || |||||||| Sbjct 4024 ATTAGACTTTCTGGTTTCCGACAGCGGATAGTAATTGACATCGATTATCTTGTTGAGGTT 4083 Query 53632 TCTGACAATTACTTTGACCACATCCTTCAGTTTGAGAAAATCAAATTGTCCATCTATT-- 53689 ||| || | ||| | || || || |||||| |||||||| ||||| |||| | Sbjct 4084 TCTTGTTATAAGCTTGGCAACTTCTTTGAGTTTGTGAAAATCATATTGTTTATCTGTGGT 4143 Query 53690 -ACAAACATGTTCAATGCAATAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGC 53748 || ||||| ||||| ||||| || || ||||| ||||| |||| || | ||| | Sbjct 4144 CACGAACATATTCAACGCAATTGAGGCTAGATTGCAAACTGCTATTTCTTCAGCTGATGT 4203 Query 53749 ATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATT 53808 ||||| | ||| || || || | ||||| || || || || || | ||| |||||||| Sbjct 4204 ATATTCGACTATTTCTGTACACAAGTTACTGCATTTTATAGTGCCAACATTCTGTTGATT 4263 Query 53809 ACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGCGTACCAGTTTCAATCTGGG- 53867 ||| || ||||| ||||| || ||||| ||| | || || || || || | || | Sbjct 4264 ACTTTTACGATTACAAGCATCTTTGTAAAGCATGTAAGGAGTCCCGGTCTCTACTTGAGC 4323 Query 53868 ATTCTATAATCGCTTTCCAGACGACACGAGCCTTTATTATAGATTTGTATCTCTTTTCTC 53927 | | ||| | || ||| | ||||||| |||||| | ||| | || |||| | | Sbjct 4324 ACTGCATATT-GCGAACCATAAATCACGAGCTTTTATTGT---TTTAT-TCGCTTTGCCC 4378 Query 53928 T----TTCGTATAGTGTATACAATCGTTCAAACTCGTCTCCCCAAACATTGTCCAATCCA 53983 | ||||||| | | || ||| ||||| | ||||| ||| | ||| ||| Sbjct 4379 TCGTCTTCGTATTTTATGTATAATTTATCAAATTTATCTCCATAAATTTCACACAAGCCA 4438 Query 53984 GGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAG 54043 || |||| || |||||||| | ||||| | | ||| ||| |||| |||||| || Sbjct 4439 GGGCATTTATGGGGACACATTAGAGACCAATGCTCATCAGCCTCTACTCTTTTCATGAAA 4498 Query 54044 AGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTA 54103 ||||| || ||||| ||||| ||||| ||| | | | || ||| || || || ||| Sbjct 4499 AGATCCGGTATCCACAGAGCATAAAATAAATCCCGTGCACGATCTTCTTCTTTACCCGTA 4558 Query 54104 TTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGTC 54163 |||||||| | || ||| || | | ||||| | |||||| || || |||||||| | Sbjct 4559 TTCTTTTTCAAATTGAGAAATTCGAATATATCTGCATGCCAAGGCTCTAAGTATATAGCA 4618 Query 54164 ATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACT 54223 | | | || || ||||| || || || || | || | || || || | | Sbjct 4619 AAAGCCCCCGGACGTTTTCCACCACCTTGGTCGACATAACGGGCAACATTGTTGAACAGA 4678 Query 54224 CTCAACATTGGAATAATACCATTGGA---TGCACCATTGGTCCCGGAGATATAGCTTCCA 54280 | |||||| |||| || |||| || |||||| | || || || | | || Sbjct 4679 CGCAACATAGGAACAAGGCCATCAGACACGTCACCAT---TACCAGATATCTTTGTCCCT 4735 Query 54281 CTGGCACGAATATTACTAATTGATAGACCTATCCCCCCTGCCATTTTAGAGATTAATGCG 54340 | || || | | ||| |||||||||||| || ||| ||||| ||| || Sbjct 4736 TTTGCTCGTACGCAATGAATATTTAGACCTATCCCACCGGCCGACTTAGAAATTTTAGCA 4795 Query 54341 CATCGTTTTA-ACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAA 54399 ||| | | || | ||||| || || || || || ||| ||| | || | || Sbjct 4796 CATTGGTCTACAGCCTTCATA-ATACCATCAATGGAGTCTTCCGGCATAGTTAGCAAGAA 4854 Query 54400 ACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGT 54459 ||| |||| ||| | || | || | ||| |||||| || || ||||| || || Sbjct 4855 GCAGGACGACAATTGTGGGCGTATGGTAGCAGCACCAAATAAAGTTGGGGAAGCATGAGT 4914 Query 54460 AAACCATTTTTCAGAAAGTAGATTGTACGTCTCGATAGCTGAGTCTATATCCCATTG--A 54517 ||| | || || | ||||| || || || ||||||| || || | ||| | Sbjct 4915 AAAGTAACGCTCCGACATGAGATTATAAGTTTCAATAGCTGCTTCAATGT--CATCGCCG 4972 Query 54518 TGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTT 54577 ||||| || | ||||||||||||||||| || || || | || || || ||| ||| Sbjct 4973 TGAATGCCAATGGCGACACGCATTAACATATGTTGTGGCCGCTCCACAATTTTGCCGTTA 5032 Query 54578 ATTTTCAGCAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCT 54637 || || | || || || ||| ||||||||||| |||||| | || || ||| || Sbjct 5033 ATCTTTAATAAATAAGACCGTTCTAAAGTTTTAAAGCCAAAAAAATTATAACTAAAATCG 5092 Query 54638 CGTTCGTAAATAATAACTGAGTTGAGTTTATCCTTATATTTGTTAACTACAT--CCATGG 54695 || ||||| |||||| | || || ||| ||| || | | || || | |||| Sbjct 5093 CGATCGTAGATAATAGCAGAATTCAGTCGATCAGCATTCTCTCTTACAACCTTGTAATGG 5152 Query 54696 TAATACTTGAAATAATCGGAGAATGTTTCCCATTTTTAGGATTGACATAGTTAAATAAAT 54755 ||| ||| ||||| || ||| | ||||| || ||| | | ||| || Sbjct 5153 AAAT--CTGATATAATAGGGGAAGGAAAGCCATT------ATCTTCATTGCGATATAGAT 5204 Query 54756 CCTTCATCACTTCACTAAATAGtttttttGTTTCTTTGTGTAGATTTGATACGGCTATTC 54815 | | ||||||||| || | ||| |||||||||||||| | ||||| || || || | Sbjct 5205 CAGTTATCACTTCAGAGAAGACTTTCTTTGTTTCTTTGTGCAAGTTTGACACTGCAATAC 5264 Query 54816 TAGCGGCTAGAATGGCATAATCCGGATG 54843 ||| |||| ||| ||||| || || || Sbjct 5265 GAGCCGCTAAAATAGCATAGTCTGGGTG 5292 >seq362 Length=381446 Score = 466 bits (516), Expect = 2e-126 Identities = 1354/2068 (65%), Gaps = 46/2068 (2%) Strand=Plus/Minus Query 52799 TTGTCCAATGTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCC 52858 || || | ||| ||||| |||||| | ||| || || || | ||| || ||||| || Sbjct 9486 TTATCGACTGTAAATTGTATGGGATTTGCTGCTGGCTTTGTTCTTAGGTAATACATACCG 9427 Query 52859 GTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTTGTTAGTTTGGAATAACTCGGA 52918 ||||| | |||| ||||||| |||||||| ||| | || ||| |||||| || Sbjct 9426 GTTTTCAAACCGGCCTTCCATCCATAAAAATGTATAGAAGATAATTTACCATAACTAGGT 9367 Query 52919 TCTGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCC 52978 || |||| || || || | ||||||||||| |||||||| || || | || ||||| Sbjct 9366 TCAGCTACGTGTATGTTAAACGATTGACTTTGGTCGATGAAAGCGCCGCGATCAACAGCC 9307 Query 52979 ATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCT 53038 || || ||| | | ||| | ||||||||||| |||||||| | | || || Sbjct 9306 ATGTTAATGGTTGATTTTACCGAAATTTCCCAAACCGTTTTATATAATTCTTTTATGCTG 9247 Query 53039 TCTGGAAGG--TTTG-TATTCTGAATAGATCCACCATCTACCATAATCCTATTCTTGATC 53095 || || | | || | | || || || || || | || | ||| || || || || Sbjct 9246 TCAGGTATGGCTTCGATGTTTTGTATTGAGCCGCGATGTGCCAATATTAAGTTTTTCATG 9187 Query 53096 TCATCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGA 53155 | ||||||||| | || || ||| || |||| | ||| |||| || || | Sbjct 9186 TTATCATTCCAAAGGCCCAATTCAGTCAAATCTTTAAGCAAATGATGATTGACCACGATA 9127 Query 53156 AATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACAGACTCA 53215 || || ||||||| ||| | || ||||||| || || || || || | |||||| Sbjct 9126 AACTCACCAGACAGTACGCGTCGTGTGTAAACGTTTGAAGTGTATGGCTCAAAAGACTCG 9067 Query 53216 TTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTT 53275 || || || | |||||||||||| || || || ||||| || || |||| ||| ||| Sbjct 9066 TTGTTACCAAGAATTTGAGCAGTAGACGCCGTAGGCATTGGAGCTACCAGCAAAGAATTG 9007 Query 53276 CTAAGACCGTATGTTCTGATTTTATCTTTTAGAGGTTCCCAATTCCAAAGATCCGACGGT 53335 | | || || || | || | ||||| |||| ||||||||| ||||| | || Sbjct 9006 CGCACTCCATAACTTTTAATGTCGTCTTTAAGAGCCGACCAATTCCATAGATCAGTAGGC 8947 Query 53336 ACAACNNNNNNNNNNNNNNNTTGTAGAATACCGTTACTGGC-GTACGATCCTACATATGT 53394 ||| || ||||| ||||| | | || | ||| |||| || Sbjct 8946 GTTTTATCCCACATATCATATTGAAGGATACCTTTACTAACTGGACTA-CCTTCATAGGT 8888 Query 53395 ATCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGTAATAAAT 53454 ||||| || || | || | || | ||||||||| || ||||| ||||| ||||| || Sbjct 8887 TTCGTACGGACCGTACTGTTTGGCCAATTCACAACTAGCTTCTAAGGCACCATAATATAT 8828 Query 53455 GGTTTCGAAGATCTTCTTATTTAGATCTTGTG---CTTCCAGGCTATCAAATGGATAATT 53511 ||||| || || | ||||||| | | || ||| | ||| ||| | |||||| Sbjct 8827 TGTTTCAAAAATTTGTTTATTTA-AGCGTGCAGCACTTTC--GCTTTCATAGGGATAACG 8771 Query 53512 TAAGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTT 53571 | | ||| | ||||| || |||||||| ||||| | ||| || || | ||| | Sbjct 8770 CATTAAAATTAGTGCGTCAGCAAATCCTTGGACACCTAAACCAATTGGACGATGACGAAA 8711 Query 53572 ATTAGAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGGTT 53631 |||||| || | ||| | | ||||| ||||| | ||| || || || |||||||| Sbjct 8710 ATTAGACTTTCTGGTTTCCGACAGCGGATAGTAATTGACATCGATTATCTTGTTGAGGTT 8651 Query 53632 TCTGACAATTACTTTGACCACATCCTTCAGTTTGAGAAAATCAAATTGTCCATCTATT-- 53689 ||| || | ||| | || || || |||||| |||||||| ||||| |||| | Sbjct 8650 TCTTGTTATAAGCTTGGCAACTTCTTTGAGTTTGTGAAAATCATATTGTTTATCTGTGGT 8591 Query 53690 -ACAAACATGTTCAATGCAATAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGC 53748 || ||||| ||||| ||||| || || ||||| ||||| |||| || | ||| | Sbjct 8590 CACGAACATATTCAACGCAATTGAGGCTAGATTGCAAACTGCTATTTCTTCAGCTGATGT 8531 Query 53749 ATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATT 53808 ||||| | || || || || | ||||| || || || || || | ||| |||||||| Sbjct 8530 ATATTCGACGATTTCTGTACACAAGTTACTGCATTTTATAGTGCCAACATTCTGTTGATT 8471 Query 53809 ACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGCGTACCAGTTTCAATCTGGG- 53867 ||| || ||||| ||||| || ||||| ||| | || || || || || | || | Sbjct 8470 ACTTTTACGATTACAAGCATCTTTGTAAAGCATGTAAGGAGTCCCGGTCTCTACTTGAGC 8411 Query 53868 ATTCTATAATCGCTTTCCAGACGACACGAGCCTTTATTATAGATTTGTATCTCTTTTCTC 53927 | | ||| | || ||| | ||||||| |||||| | ||| | || |||| | | Sbjct 8410 ACTGCATATT-GCGAACCATAAATCACGAGCTTTTATTGT---TTTAT-TCGCTTTGCCC 8356 Query 53928 T----TTCGTATAGTGTATACAATCGTTCAAACTCGTCTCCCCAAACATTGTCCAATCCA 53983 | ||||||| | | || ||| ||||| | ||||| ||| | ||| ||| Sbjct 8355 TCGTCTTCGTATTTTATGTATAATTTATCAAATTTATCTCCATAAATTTCACACAAGCCA 8296 Query 53984 GGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAG 54043 || |||| || |||||||| | ||||| | | ||| ||| |||| |||||| || Sbjct 8295 GGGCATTTATGGGGACACATTAGAGACCAATGCTCATCAGCCTCTACTCTTTTCATGAAA 8236 Query 54044 AGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTA 54103 ||||| || ||||| ||||| ||||| ||| | | | || ||| || || || ||| Sbjct 8235 AGATCCGGTATCCACAGAGCATAAAATAAATCCCGTGCACGATCTTCTTCTTTACCCGTA 8176 Query 54104 TTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGTC 54163 |||||||| | || ||| || | | ||||| | |||||| || || |||||||| | Sbjct 8175 TTCTTTTTCAAATTGAGAAATTCGAATATATCTGCATGCCAAGGCTCTAAGTATATAGCA 8116 Query 54164 ATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACT 54223 | | | || || ||||| || || || || | || | || || || | | Sbjct 8115 AAAGCCCCCGGACGTTTTCCACCACCTTGGTCGACATAACGGGCAACATTGTTGAACAGA 8056 Query 54224 CTCAACATTGGAATAATACCATTGGA---TGCACCATTGGTCCCGGAGATATAGCTTCCA 54280 | |||||| |||| || |||| || |||||| | || || || | | || Sbjct 8055 CGCAACATAGGAACAAGGCCATCAGACACGTCACCAT---TACCAGATATCTTTGTCCCT 7999 Query 54281 CTGGCACGAATATTACTAATTGATAGACCTATCCCCCCTGCCATTTTAGAGATTAATGCG 54340 | || || | | ||| |||||||||||| || ||| ||||| ||| || Sbjct 7998 TTTGCTCGTACGCAATGAATATTTAGACCTATCCCACCGGCCGACTTAGAAATTTTAGCA 7939 Query 54341 CATCGTTTTA-ACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAA 54399 ||| | | || | ||||| || || || || || ||| ||| | || | || Sbjct 7938 CATTGGTCTACAGCCTTCATA-ATACCATCAATGGAGTCTTCCGGCATAGTTAGCAAGAA 7880 Query 54400 ACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGT 54459 ||| |||| ||| | || | || | ||| |||||| || || ||||| || || Sbjct 7879 GCAGGACGACAATTGTGGGCGTATGGTAGCAGCACCAAATAAAGTTGGGGAAGCATGAGT 7820 Query 54460 AAACCATTTTTCAGAAAGTAGATTGTACGTCTCGATAGCTGAGTCTATATCCCATTG--A 54517 ||| | || || | ||||| || || || ||||||| || || | ||| | Sbjct 7819 AAAGTAACGCTCCGACATGAGATTATAAGTTTCAATAGCTGCTTCAATGT--CATCGCCG 7762 Query 54518 TGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTT 54577 ||||| || | ||||||||||||||||| || || || | || || || ||| ||| Sbjct 7761 TGAATGCCAATGGCGACACGCATTAACATATGTTGTGGCCGCTCCACAATTTTGCCGTTA 7702 Query 54578 ATTTTCAGCAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCT 54637 || || | || || || ||| ||||||||||| |||||| | || || ||| || Sbjct 7701 ATCTTTAATAAATAAGACCGTTCTAAAGTTTTAAAGCCAAAAAAATTATAACTAAAATCG 7642 Query 54638 CGTTCGTAAATAATAACTGAGTTGAGTTTATCCTTATATTTGTTAACTACAT--CCATGG 54695 || ||||| |||||| | || || ||| ||| || | | || || | |||| Sbjct 7641 CGATCGTAGATAATAGCAGAATTCAGTCGATCAGCATTCTCTCTTACAACCTTGTAATGG 7582 Query 54696 TAATACTTGAAATAATCGGAGAATGTTTCCCATTTTTAGGATTGACATAGTTAAATAAAT 54755 ||| ||| ||||| || ||| | ||||| || ||| | | ||| || Sbjct 7581 AAAT--CTGATATAATAGGGGAAGGAAAGCCATT------ATCTTCATTGCGATATAGAT 7530 Query 54756 CCTTCATCACTTCACTAAATAGtttttttGTTTCTTTGTGTAGATTTGATACGGCTATTC 54815 | | ||||||||| || | ||| |||||||||||||| | ||||| || || || | Sbjct 7529 CAGTTATCACTTCAGAGAAGACTTTCTTTGTTTCTTTGTGCAAGTTTGACACTGCAATAC 7470 Query 54816 TAGCGGCTAGAATGGCATAATCCGGATG 54843 ||| |||| ||| ||||| || || || Sbjct 7469 GAGCCGCTAAAATAGCATAGTCTGGGTG 7442 >seq158 Length=613782 Score = 266 bits (294), Expect = 4e-66 Identities = 488/710 (69%), Gaps = 9/710 (1%) Strand=Plus/Plus Query 23963 CAATCTATCTGCGACAAACTCCATATATGTTTTCATCATTTCACAATTCATTCCTATAAG 24022 ||| | ||| || ||| | || |||||| | ||| |||| | ||||| || || | Sbjct 555573 CAAACGATCGGCAACATATTCTATATATTTACACATACTTTCGCTGTTCATGCCAATTAA 555632 Query 24023 TTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACCGCGTCTGTTATAAT 24082 | ||||| | ||| | || | ||| |||| |||||| || || |||||||| || Sbjct 555633 GTCGACTGGTAAGGCCTCTGTCAAAAACTCTTTTTCAATTTTAACGGCATCTGTTATTAT 555692 Query 24083 AGATCTTA---CTGTTTCTTCACTCGGTGGATACAATAAATGTTTAAACATCAAACATGC 24139 || | | ||| ||| |||||| | | |||||||||||||| || || Sbjct 555693 T--TCCAAAATCCGTT-CTTTGCTCGGTTTTTGTATCAAATGTTTAAACATTAATACCGC 555749 Query 24140 GAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGG 24199 || || ||||| | || || || | || | ||| || || ||||| | || || Sbjct 555750 AAATTCACAGTGCAAGCCTTCATCGCGTGATATCATTTCATTAGAGAACGTTAAACCTGG 555809 Query 24200 CATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCC 24259 ||||| ||||| || || ||||||||||| || || || ||| |||||| || || Sbjct 555810 CATTATTCCACGTTTCTTTAGCCAAAATATCGAAGCGAAGCTCCCACTAAAGAATATACC 555869 Query 24260 TTCTACTGCCGCAAAGGCAATAAGTCTTTCTCCATAACCGGCGC--TGTCATG-TATCCA 24316 ||| || || || || || |||| | ||| || || || || ||| |||||| Sbjct 555870 TTCGACGGCAGCGAAAGCTATAACACGTTCACCGAAATTAGCCGAATGCGATGATATCCA 555929 Query 24317 CTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATTAAAGAG 24376 | | ||||| || |||||||| || || | ||||||||||| || |||||||| || Sbjct 555930 AGCTAGTGCCCATTCCGCCTTCTTCTTAACCAATGGCATTGTCTCAATGGCATTAAATAG 555989 Query 24377 ATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGACTATACATTTCCGA 24436 ||| | ||||| || |||| | | |||||| || || | | ||||||||||||||| Sbjct 555990 ATATTCCTTTTCTTTCTCATCTCTGATATATGTTTCGATAAGTAAACTATACATTTCCGA 556049 Query 24437 ATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGTAC 24496 || | ||||| ||||| |||||||| || || || || | || ||||| || || || Sbjct 556050 GTGTACATTTTCCATGGCAATTTGAAACCCATAAAAGCAACGTGCTTCGGTTATTTGAAC 556109 Query 24497 TTCTATACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAA 24556 ||| |||||||||| ||||||| ||||| || || || || || |||||||| Sbjct 556110 CTCTTGGGAAAATCGTTCCACTAAATTCTCATTAACAATACCATCGGATGCCGCAAAAAA 556169 Query 24557 CGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTTAGTTTATTCCAATCATTGAT 24616 ||||| || ||| ||||||| |||| | ||| ||||||||| | ||| Sbjct 556170 AGCCAAAACGTGTGAAATAAAATGACGTTCGCCATTACTTAACCGATTCCAATCGTCGAT 556229 Query 24617 ATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCT 24666 ||||||||| | || |||||||| | |||||||| || || || |||| Sbjct 556230 ATCTTTAGAGAGGTCAACTTCTTCTGCAGTCCAAAAAGAGGCTTCCGCCT 556279 Score = 82.4 bits (90), Expect = 9e-11 Identities = 69/85 (81%), Gaps = 0/85 (0%) Strand=Plus/Plus Query 24664 CCTTTTTATACATATTCCAGATGTCATGATATTGAATTGGAAAAATAACAAATCTATTTG 24723 ||||||||||||| ||||| ||||| ||||||||||||||||||| ||||| | || | Sbjct 557628 CCTTTTTATACATCTTCCATATGTCGGGATATTGAATTGGAAAAATGACAAAACGTTTGG 557687 Query 24724 GATTTTTTGCAAGGATTGGTTCCAT 24748 |||||| | ||| | ||| || || Sbjct 557688 GATTTTCTTTAAGCAATGGCTCTAT 557712 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 593692463112480