Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glossina_20palpalis_20gambiensis_20[genbank_20GCA_5F000818775.1_2020 15-01-15] 3,926 sequences; 380,104,241 total letters Query= NC_003391.1 Length=205719 Score E Sequences producing significant alignments: (Bits) Value seq197 527 8e-145 seq961 473 2e-128 seq362 468 7e-127 seq158 273 3e-68 seq832 84.2 3e-11 >seq197 Length=390979 Score = 527 bits (584), Expect = 8e-145 Identities = 1407/2130 (66%), Gaps = 44/2130 (2%) Strand=Plus/Minus Query 64830 TTGTCCAATGTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCC 64889 || || | ||| || || ||||| | ||| || || || |||||| ||||| || Sbjct 299261 TTATCGACTGTAAAATGTGTGGGATTCGCTGCTGGCTTTGTTTTTAGATAATACATACCG 299202 Query 64890 GTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGGA 64949 || |||| |||| ||||||| |||||||| ||| | | ||| |||||| || Sbjct 299201 GTCTTTAAACCGGCTTTCCATCCATAAAAATGTATAGAAGACAATTTACCATAACTAGGT 299142 Query 64950 TCTGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCC 65009 || |||| || ||||| | ||||| ||||| |||||||| || || | || |||||| Sbjct 299141 TCAGCTACGTGTATATTGAATGATTGGCTTTGGTCGATGAAAGCACCGCGATCGGCAGCC 299082 Query 65010 ATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCT 65069 || || ||| | | || | ||||||||||| |||||||| | | || ||| Sbjct 299081 ATGTTAATGGTTGATTTCACCGAAATTTCCCAAACCGTTTTATACAATTCTTTTATACTA 299022 Query 65070 TCTGGAAGG---TTTGTATTCTGAATGGATCCACCATCTGCCATAATCCTATTCTTGATC 65126 || || | | | | || || || || || | || ||||| || || || || Sbjct 299021 TCAGGTATGGCCTCAATGTTTTGTATTGAGCCGCGATGTGCCAATATTAAGTTTTTCATG 298962 Query 65127 TCATCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGA 65186 ||||||||||| | || || ||| || | || | ||| |||| || || | Sbjct 298961 TCATCATTCCAAAGGCGCAATTCAGTCAAATCTTTGAGCAAATGATGATTGACGACAATA 298902 Query 65187 AATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACAGACTCA 65246 ||||| || |||||||| | || ||||||| || || ||||| || | |||||| Sbjct 298901 AATTCACCGGACAATACACGTCGTGTGTAAACGTTTGACGTGTACGGCTCAAAAGACTCG 298842 Query 65247 TTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTT 65306 ||||| || | |||||||||||| || || || ||||| ||||| |||| || ||| Sbjct 298841 TTATTACCAAGAATTTGAGCAGTGGACGCGGTAGGCATTGGTGCTACCAGCAAGGAATTG 298782 Query 65307 CTAAGACCGTATGTTCTGATTTTATCTTTTAGAGGTTCCCAATTCCAAAGATCCGACGGT 65366 | | || || | | || | ||||| |||| ||||||||| ||||| | || Sbjct 298781 CGCACTCCATAACTCTTAATGTCGTCTTTAAGAGCCGACCAATTCCATAGATCAGTAGGC 298722 Query 65367 ACAACNNNNNNNNNNNNNNNTTGTAGAATACCGTTACTGGC-GTACGATCCTACATATGT 65425 ||| ||||| || ||||| | | || | ||| ||||||| Sbjct 298721 GTTTTATCCCACATATCATATTGAAGAATGCCTTTACTAACTGGACTA-CCTTCATATGT 298663 Query 65426 ATCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGTAATAAAT 65485 ||||| || || | | | || | |||||||| |||||||| ||||| ||||| || Sbjct 298662 TTCGTAAGGACCGTATTGTTTGGCCAACTCACAACTAGCCTCTAAAGCACCATAATATAT 298603 Query 65486 GGTTTCGAAGATCTTCTTATTTAGATCTTGT-GCTTCCAGGCTATCAAATGGATAATTTA 65544 |||||| || || | ||||||| | | | || | | ||| ||| | || ||| | Sbjct 298602 GGTTTCAAAAATTTGTTTATTTA-AGCGAGCAGCATTCTCGCTTTCATAGGGGTAACGCA 298544 Query 65545 AGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTAT 65604 | ||| | ||||| || |||||||| ||||| |||||||| || | ||| | || Sbjct 298543 TTAAAATTAGTGCGTCAGCAAATCCTTGGACACCTATACCGATTGGACGATGACGTAAAT 298484 Query 65605 TAGAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTTC 65664 |||| ||| ||||| || | ||||||||||| | || || || || || ||||||| Sbjct 298483 TAGATTTTTTGGCTTCCGGCAGCGGATAATAATTGACGTCGATTATCTTGTTAAGATTTC 298424 Query 65665 TGACAATTA-CTTTGACCACATCCTTCAGTTTGAGAAAATCAAATCGCTCATCTATT--- 65720 | || | ||||| | || || |||||||| | |||||| || | | |||| | Sbjct 298423 TTGTTATAAGCTTTG-CAACTTCTTTCAGTTTCTGGAAATCATATTGTTTATCTGTCGTC 298365 Query 65721 ACAAACATGTTCAATGCAACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCA 65780 || ||||| |||| |||| || |||||||| ||||| |||| || | ||| || | Sbjct 298364 ACGAACATATTCACCGCAATTGAGGCCAGATTGCAAACTGCTATTTCCTCAGCCGACGTA 298305 Query 65781 TATTGTATTATCTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTA 65840 |||| | || || || || | ||||| || || || || || | ||| ||||||||| Sbjct 298304 TATTCGACAATTTCTGTACACAAGTTACTGCATTTTATTGTGCCAACATTCTGTTGATTA 298245 Query 65841 CTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAG-A 65899 || || ||||| ||||| || ||||| ||| | ||||| || || || | || | | Sbjct 298244 CTTTTGCGATTACAAGCATCTTTGTAAAGCATGTAAGGAGTTCCGGTCTCTAGTTGGGCA 298185 Query 65900 TTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAGATTTGTATCTCTTTTCTCT 65959 | ||| | || ||| | | ||||| |||||| | ||| | || |||| | || Sbjct 298184 CTGCATATT-GCGAACCACAACTCACGAGCTTTTATTGT---TTTAT-TCGCTTTACCCT 298130 Query 65960 ----TTCGTATAGTGTATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAATCCAG 66015 ||| ||| | | |||||| || || | |||||| | |||| ||||| |||| Sbjct 298129 CGTCTTCATATTTTATGTACAATTTATCAAATTTGTCTCCATATACATCTTCCAAGCCAG 298070 Query 66016 GACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGA 66075 | |||| || || ||||| || ||||| | | ||| | | ||||| |||||| || | Sbjct 298069 GGCATTTATGGGGGCACATTAAAGACCAATGCTCATCAGCTTCCACTCTTTTCATGAATA 298010 Query 66076 GATCAGGAATCCAAAGAGCTATAAATAAATCTCTGGTTCTATGTTCCTCGTTTCCTGTAT 66135 ||| || ||||| ||||| | ||||||||| | | | || |||||| || || |||| Sbjct 298009 AATCTGGTATCCACAGAGCAAAAAATAAATCCCGTGCACGATCTTCCTCTTTGCCCGTAT 297950 Query 66136 TCTTTTTAAGATCGAGGAACGCCATAATATCATAATGCCACGGTTCCAAGTATATGGCCA 66195 ||||||| | || || || | | |||||| ||||| ||||| ||||| || || | Sbjct 297949 TCTTTTTCAAGTCAAGAAATTCGAAAATATCTGCGTGCCAAGGTTCTAAGTAGATAGCAA 297890 Query 66196 TAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTC 66255 | || |||| | || | |||| || || | || || || | || | Sbjct 297889 GTGCACCTCTACGTTGTCTGCCATCTTGATGTACATAACAGGCAAGATTGTTGAAGACGC 297830 Query 66256 TCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCGGAGATATAGCTTCCACTTG 66315 |||||| |||| || |||||| ||| ||||| || ||||| || | | || ||| Sbjct 297829 GCAACATAGGAACAAGACCATTCGATACGCCATTAGTACCGGATATCTTCGTACCTTTTG 297770 Query 66316 CACGAAT--ATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCA 66373 | || || | | ||| ||| |||| || || | | ||| || ||| || || Sbjct 297769 CTCGTATGCAATGGACATT--CAGAGCTATGCCACCCGTCGATTTGGAAATTTCAGCACA 297712 Query 66374 TCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCAT-GTTAAGTAGAAAAC 66432 | | ||| | | | | ||||| || || || ||| ||| ||||| || |||| Sbjct 297711 TTGCCTTACAGCCTTAAAAATGCCATCAATGGAGTCTTCCGGCATCGTTAACAAG-AAAC 297653 Query 66433 AGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAA 66492 || |||| ||| | ||| | || | ||| |||||| || | ||||| || || | Sbjct 297652 AGGATGACAGTTGCGGGCGAATTGTAGCAGCACCAAATAAAGTTGAGGAAGCATGAGTGA 297593 Query 66493 ACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATATCCCATTGATGAA 66552 | | || || | |||||||| || || ||||||| || || || |||| Sbjct 297592 AGTAACGCTCCGACATGAGATTGTAAGTTTCGATAGCTGCCTCAATGTCGTCGCCGTGAA 297533 Query 66553 TTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTT 66612 | || | ||||||||||||||||| || || || | || || || || || || | Sbjct 297532 TGCCAATGGCGACACGCATTAACATATGTTGTGGCCGCTCCACAATTTTCCCATTAATCT 297473 Query 66613 TCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA--TGAAAAGTCTCG 66670 | ||||| || || ||| || ||||| || |||||| | ||||| ||||| || || Sbjct 297472 TTAACAAATAAGACCGTTCTAATGTTTTGAAGCCAAAAAAATTGTAACTGAAA--TCGCG 297415 Query 66671 TTCGTAAATAATAACCGAGTTGAGTTTATCCTTATATTTGTTAACTACAT--CCATGGTA 66728 || |||||||| |||| || ||| ||| || | || || || | |||||| Sbjct 297414 ATCATAAATAATGGCCGAATTTAGTCGATCAGCATGCTCTTTTACAACCTTGTAATGGTA 297355 Query 66729 ATACTTGAAATAATCGGAGAATGTTTCCCATTTTTAGGATTGACATAGTTGAATAAATCC 66788 || ||| ||||| || ||| | ||||| || ||| || || ||| Sbjct 297354 AT--CTGATATAATAGGCGAAGGACAGCCATT------ATCTTCATTGTGATGTAGATCA 297303 Query 66789 TCCATCACTTCACTAAATAGtttttttGTTTCTTTGTGTAGATTTGATACGGCTATTCTA 66848 ||||||||| |||| ||| ||||||||||| || | |||||||| || || | Sbjct 297302 CTTATCACTTCAGAGAATACTTTCTTTGTTTCTTTATGCAAGTTTGATACAGCAATACGG 297243 Query 66849 GCGGCTATAATGGCATAATCCGGATGTTGTGTAGTACAAG-TGGCTGCTATTTCGGCTGC 66907 ||||||| ||| ||||| ||||| || | || || || | ||| || ||||||| || Sbjct 297242 GCGGCTAAAATAGCATAGTCCGGGTGATCGGTGGT-CATGCAGGCCGCAGTTTCGGCAGC 297184 Query 66908 CAGAGTGTCCAATTCTACCGTTGTTACTCC 66937 | | | ||||||||| ||| || || || Sbjct 297183 TAAATTATCCAATTCTTGCGTGGTGACGCC 297154 >seq961 Length=34630 Score = 473 bits (524), Expect = 2e-128 Identities = 1388/2118 (66%), Gaps = 48/2118 (2%) Strand=Plus/Plus Query 64830 TTGTCCAATGTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCC 64889 || || | ||| ||||| |||||| | ||| || || || | ||| || ||||| || Sbjct 3248 TTATCGACTGTAAATTGTATGGGATTTGCTGCTGGCTTTGTTCTTAGGTAATACATACCG 3307 Query 64890 GTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGGA 64949 ||||| | |||| ||||||| |||||||| ||| | || ||| |||||| || Sbjct 3308 GTTTTCAAACCGGCCTTCCATCCATAAAAATGTATAGAAGATAATTTACCATAACTAGGT 3367 Query 64950 TCTGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCC 65009 || |||| || || || | ||||||||||| |||||||| || || | || ||||| Sbjct 3368 TCAGCTACGTGTATGTTAAACGATTGACTTTGGTCGATGAAAGCGCCGCGATCAACAGCC 3427 Query 65010 ATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCT 65069 || || ||| | | ||| | ||||||||||| |||||||| | | || || Sbjct 3428 ATGTTAATGGTTGATTTTACCGAAATTTCCCAAACCGTTTTATATAATTCTTTTATGCTG 3487 Query 65070 TCTGGAAGG--TTTG-TATTCTGAATGGATCCACCATCTGCCATAATCCTATTCTTGATC 65126 || || | | || | | || || || || || | || ||||| || || || || Sbjct 3488 TCAGGTATGGCTTCGATGTTTTGTATTGAGCCGCGATGTGCCAATATTAAGTTTTTCATG 3547 Query 65127 TCATCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGA 65186 | ||||||||| | || || ||| || |||| | ||| |||| || || | Sbjct 3548 TTATCATTCCAAAGGCCCAATTCAGTCAAATCTTTAAGCAAATGATGATTGACCACGATA 3607 Query 65187 AATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACAGACTCA 65246 || || ||||||| ||| | || ||||||| || || || || || | |||||| Sbjct 3608 AACTCACCAGACAGTACGCGTCGTGTGTAAACGTTTGAAGTGTATGGCTCAAAAGACTCG 3667 Query 65247 TTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTT 65306 || || || | |||||||||||| || || || ||||| || || |||| ||| ||| Sbjct 3668 TTGTTACCAAGAATTTGAGCAGTAGACGCCGTAGGCATTGGAGCTACCAGCAAAGAATTG 3727 Query 65307 CTAAGACCGTATGTTCTGATTTTATCTTTTAGAGGTTCCCAATTCCAAAGATCCGACGGT 65366 | | || || || | || | ||||| |||| ||||||||| ||||| | || Sbjct 3728 CGCACTCCATAACTTTTAATGTCGTCTTTAAGAGCCGACCAATTCCATAGATCAGTAGGC 3787 Query 65367 ACAACNNNNNNNNNNNNNNNTTGTAGAATACCGTTACTGGC-GTACGATCCTACATATGT 65425 ||| || ||||| ||||| | | || | ||| |||| || Sbjct 3788 GTTTTATCCCACATATCATATTGAAGGATACCTTTACTAACTGGACTA-CCTTCATAGGT 3846 Query 65426 ATCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGTAATAAAT 65485 ||||| || || | || | || | ||||||||| || ||||| ||||| ||||| || Sbjct 3847 TTCGTACGGACCGTACTGTTTGGCCAATTCACAACTAGCTTCTAAGGCACCATAATATAT 3906 Query 65486 GGTTTCGAAGATCTTCTTATTTAGATCTTGTG---CTTCCAGGCTATCAAATGGATAATT 65542 ||||| || || | ||||||| | | || ||| | ||| ||| | |||||| Sbjct 3907 TGTTTCAAAAATTTGTTTATTTA-AGCGTGCAGCACTTTC--GCTTTCATAGGGATAACG 3963 Query 65543 TAAGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTT 65602 | | ||| | ||||| || |||||||| ||||| | ||| || || | ||| | Sbjct 3964 CATTAAAATTAGTGCGTCAGCAAATCCTTGGACACCTAAACCAATTGGACGATGACGAAA 4023 Query 65603 ATTAGAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATT 65662 |||||| || | ||| | | ||||| ||||| | ||| || || || ||||| || Sbjct 4024 ATTAGACTTTCTGGTTTCCGACAGCGGATAGTAATTGACATCGATTATCTTGTTGAGGTT 4083 Query 65663 TCTGACAATTACTTTGACCACATCCTTCAGTTTGAGAAAATCAAATCGCTCATCTATT-- 65720 ||| || | ||| | || || || |||||| |||||||| || | | |||| | Sbjct 4084 TCTTGTTATAAGCTTGGCAACTTCTTTGAGTTTGTGAAAATCATATTGTTTATCTGTGGT 4143 Query 65721 -ACAAACATGTTCAATGCAACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGC 65779 || ||||| ||||| |||| || || ||||| ||||| |||| || | ||| | Sbjct 4144 CACGAACATATTCAACGCAATTGAGGCTAGATTGCAAACTGCTATTTCTTCAGCTGATGT 4203 Query 65780 ATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATT 65839 ||||| | ||| || || || | ||||| || || || || || | ||| |||||||| Sbjct 4204 ATATTCGACTATTTCTGTACACAAGTTACTGCATTTTATAGTGCCAACATTCTGTTGATT 4263 Query 65840 ACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAG- 65898 ||| || ||||| ||||| || ||||| ||| | ||||| || || || | |||| Sbjct 4264 ACTTTTACGATTACAAGCATCTTTGTAAAGCATGTAAGGAGTCCCGGTCTCTACTTGAGC 4323 Query 65899 ATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAGATTTGTATCTCTTTTCTC 65958 | | ||| | || ||| | | ||||| |||||| | ||| | || |||| | | Sbjct 4324 ACTGCATATT-GCGAACCATAAATCACGAGCTTTTATTGT---TTTAT-TCGCTTTGCCC 4378 Query 65959 T----TTCGTATAGTGTATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAATCCA 66014 | ||||||| | | || ||| || || | ||||| ||| | ||| ||| Sbjct 4379 TCGTCTTCGTATTTTATGTATAATTTATCAAATTTATCTCCATAAATTTCACACAAGCCA 4438 Query 66015 GGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAG 66074 || |||| || |||||||| | ||||| | | ||| ||| |||| |||||| || Sbjct 4439 GGGCATTTATGGGGACACATTAGAGACCAATGCTCATCAGCCTCTACTCTTTTCATGAAA 4498 Query 66075 AGATCAGGAATCCAAAGAGCTATAAATAAATCTCTGGTTCTATGTTCCTCGTTTCCTGTA 66134 ||||| || ||||| ||||| ||||||||| | | | || ||| || || || ||| Sbjct 4499 AGATCCGGTATCCACAGAGCATAAAATAAATCCCGTGCACGATCTTCTTCTTTACCCGTA 4558 Query 66135 TTCTTTTTAAGATCGAGGAACGCCATAATATCATAATGCCACGGTTCCAAGTATATGGCC 66194 |||||||| | || ||| || | | ||||| |||||| || || |||||||| || Sbjct 4559 TTCTTTTTCAAATTGAGAAATTCGAATATATCTGCATGCCAAGGCTCTAAGTATATAGCA 4618 Query 66195 ATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACT 66254 | | | || || ||||| || || || || | || | || || || | | Sbjct 4619 AAAGCCCCCGGACGTTTTCCACCACCTTGGTCGACATAACGGGCAACATTGTTGAACAGA 4678 Query 66255 CTCAACATTGGAATAATACCATTGG--ATGT-ACCATTGGTCCCGGAGATATAGCTTCCA 66311 | |||||| |||| || |||| | | || ||||| | || || || | | || Sbjct 4679 CGCAACATAGGAACAAGGCCATCAGACACGTCACCAT---TACCAGATATCTTTGTCCCT 4735 Query 66312 CTTGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCG 66371 |||| || | | ||| ||||||||| || || ||| ||||| ||| || Sbjct 4736 TTTGCTCGTACGCAATGAATATTTAGACCTATCCCACCGGCCGACTTAGAAATTTTAGCA 4795 Query 66372 CATCGTTTTA-ACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAA 66430 ||| | | || | ||||| || || || || || ||| ||| | || | || Sbjct 4796 CATTGGTCTACAGCCTTCATA-ATACCATCAATGGAGTCTTCCGGCATAGTTAGCAAGAA 4854 Query 66431 ACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGT 66490 ||| |||| ||| | || | || | ||| |||||| || || ||||| || || Sbjct 4855 GCAGGACGACAATTGTGGGCGTATGGTAGCAGCACCAAATAAAGTTGGGGAAGCATGAGT 4914 Query 66491 AAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATATCCCATTG--A 66548 ||| | || || | ||||| || || |||||||||| || || | ||| | Sbjct 4915 AAAGTAACGCTCCGACATGAGATTATAAGTTTCAATAGCTGCTTCAATGT--CATCGCCG 4972 Query 66549 TGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTT 66608 ||||| || | ||||||||||||||||| || || || | || || || ||| ||| Sbjct 4973 TGAATGCCAATGGCGACACGCATTAACATATGTTGTGGCCGCTCCACAATTTTGCCGTTA 5032 Query 66609 ATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCT 66668 || || || || || || ||| ||||||||||| |||||| | || || ||| || Sbjct 5033 ATCTTTAATAAATAAGACCGTTCTAAAGTTTTAAAGCCAAAAAAATTATAACTAAAATCG 5092 Query 66669 CGTTCGTAAATAATAACCGAGTTGAGTTTATCCTTATATTTGTTAACTACAT--CCATGG 66726 || ||||| |||||| | || || ||| ||| || | | || || | |||| Sbjct 5093 CGATCGTAGATAATAGCAGAATTCAGTCGATCAGCATTCTCTCTTACAACCTTGTAATGG 5152 Query 66727 TAATACTTGAAATAATCGGAGAATGTTTCCCATTTTTAGGATTGACATAGTTGAATAAAT 66786 ||| ||| ||||| || ||| | ||||| | |||| || ||| || Sbjct 5153 AAAT--CTGATATAATAGGGGAAGGAAAGCCATTATCTTCATTGCGAT------ATAGAT 5204 Query 66787 CCTCCATCACTTCACTAAATAGtttttttGTTTCTTTGTGTAGATTTGATACGGCTATTC 66846 | ||||||||| || | ||| |||||||||||||| | ||||| || || || | Sbjct 5205 CAGTTATCACTTCAGAGAAGACTTTCTTTGTTTCTTTGTGCAAGTTTGACACTGCAATAC 5264 Query 66847 TAGCGGCTATAATGGCATAATCCGGATGTTGTGTAGTACAAG-TGGCTGCTATTTCGGCT 66905 ||| |||| ||| ||||| || || || | || || || | || || |||| || Sbjct 5265 GAGCCGCTAAAATAGCATAGTCTGGGTGATCGGTGGT-CATGCAAGCAGCAGTTTCAGCA 5323 Query 66906 GCCAGAGTGTCCAATTCT 66923 || | | | ||||||||| Sbjct 5324 GCTAAATTATCCAATTCT 5341 >seq362 Length=381446 Score = 468 bits (518), Expect = 7e-127 Identities = 1387/2118 (65%), Gaps = 48/2118 (2%) Strand=Plus/Minus Query 64830 TTGTCCAATGTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCC 64889 || || | ||| ||||| |||||| | ||| || || || | ||| || ||||| || Sbjct 9486 TTATCGACTGTAAATTGTATGGGATTTGCTGCTGGCTTTGTTCTTAGGTAATACATACCG 9427 Query 64890 GTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGGA 64949 ||||| | |||| ||||||| |||||||| ||| | || ||| |||||| || Sbjct 9426 GTTTTCAAACCGGCCTTCCATCCATAAAAATGTATAGAAGATAATTTACCATAACTAGGT 9367 Query 64950 TCTGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCC 65009 || |||| || || || | ||||||||||| |||||||| || || | || ||||| Sbjct 9366 TCAGCTACGTGTATGTTAAACGATTGACTTTGGTCGATGAAAGCGCCGCGATCAACAGCC 9307 Query 65010 ATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCT 65069 || || ||| | | ||| | ||||||||||| |||||||| | | || || Sbjct 9306 ATGTTAATGGTTGATTTTACCGAAATTTCCCAAACCGTTTTATATAATTCTTTTATGCTG 9247 Query 65070 TCTGGAAGG--TTTG-TATTCTGAATGGATCCACCATCTGCCATAATCCTATTCTTGATC 65126 || || | | || | | || || || || || | || ||||| || || || || Sbjct 9246 TCAGGTATGGCTTCGATGTTTTGTATTGAGCCGCGATGTGCCAATATTAAGTTTTTCATG 9187 Query 65127 TCATCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGA 65186 | ||||||||| | || || ||| || |||| | ||| |||| || || | Sbjct 9186 TTATCATTCCAAAGGCCCAATTCAGTCAAATCTTTAAGCAAATGATGATTGACCACGATA 9127 Query 65187 AATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACAGACTCA 65246 || || ||||||| ||| | || ||||||| || || || || || | |||||| Sbjct 9126 AACTCACCAGACAGTACGCGTCGTGTGTAAACGTTTGAAGTGTATGGCTCAAAAGACTCG 9067 Query 65247 TTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTT 65306 || || || | |||||||||||| || || || ||||| || || |||| ||| ||| Sbjct 9066 TTGTTACCAAGAATTTGAGCAGTAGACGCCGTAGGCATTGGAGCTACCAGCAAAGAATTG 9007 Query 65307 CTAAGACCGTATGTTCTGATTTTATCTTTTAGAGGTTCCCAATTCCAAAGATCCGACGGT 65366 | | || || || | || | ||||| |||| ||||||||| ||||| | || Sbjct 9006 CGCACTCCATAACTTTTAATGTCGTCTTTAAGAGCCGACCAATTCCATAGATCAGTAGGC 8947 Query 65367 ACAACNNNNNNNNNNNNNNNTTGTAGAATACCGTTACTGGC-GTACGATCCTACATATGT 65425 ||| || ||||| ||||| | | || | ||| |||| || Sbjct 8946 GTTTTATCCCACATATCATATTGAAGGATACCTTTACTAACTGGACTA-CCTTCATAGGT 8888 Query 65426 ATCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGTAATAAAT 65485 ||||| || || | || | || | ||||||||| || ||||| ||||| ||||| || Sbjct 8887 TTCGTACGGACCGTACTGTTTGGCCAATTCACAACTAGCTTCTAAGGCACCATAATATAT 8828 Query 65486 GGTTTCGAAGATCTTCTTATTTAGATCTTGTG---CTTCCAGGCTATCAAATGGATAATT 65542 ||||| || || | ||||||| | | || ||| | ||| ||| | |||||| Sbjct 8827 TGTTTCAAAAATTTGTTTATTTA-AGCGTGCAGCACTTTC--GCTTTCATAGGGATAACG 8771 Query 65543 TAAGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTT 65602 | | ||| | ||||| || |||||||| ||||| | ||| || || | ||| | Sbjct 8770 CATTAAAATTAGTGCGTCAGCAAATCCTTGGACACCTAAACCAATTGGACGATGACGAAA 8711 Query 65603 ATTAGAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATT 65662 |||||| || | ||| | | ||||| ||||| | ||| || || || ||||| || Sbjct 8710 ATTAGACTTTCTGGTTTCCGACAGCGGATAGTAATTGACATCGATTATCTTGTTGAGGTT 8651 Query 65663 TCTGACAATTACTTTGACCACATCCTTCAGTTTGAGAAAATCAAATCGCTCATCTATT-- 65720 ||| || | ||| | || || || |||||| |||||||| || | | |||| | Sbjct 8650 TCTTGTTATAAGCTTGGCAACTTCTTTGAGTTTGTGAAAATCATATTGTTTATCTGTGGT 8591 Query 65721 -ACAAACATGTTCAATGCAACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGC 65779 || ||||| ||||| |||| || || ||||| ||||| |||| || | ||| | Sbjct 8590 CACGAACATATTCAACGCAATTGAGGCTAGATTGCAAACTGCTATTTCTTCAGCTGATGT 8531 Query 65780 ATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATT 65839 ||||| | || || || || | ||||| || || || || || | ||| |||||||| Sbjct 8530 ATATTCGACGATTTCTGTACACAAGTTACTGCATTTTATAGTGCCAACATTCTGTTGATT 8471 Query 65840 ACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAG- 65898 ||| || ||||| ||||| || ||||| ||| | ||||| || || || | |||| Sbjct 8470 ACTTTTACGATTACAAGCATCTTTGTAAAGCATGTAAGGAGTCCCGGTCTCTACTTGAGC 8411 Query 65899 ATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAGATTTGTATCTCTTTTCTC 65958 | | ||| | || ||| | | ||||| |||||| | ||| | || |||| | | Sbjct 8410 ACTGCATATT-GCGAACCATAAATCACGAGCTTTTATTGT---TTTAT-TCGCTTTGCCC 8356 Query 65959 T----TTCGTATAGTGTATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAATCCA 66014 | ||||||| | | || ||| || || | ||||| ||| | ||| ||| Sbjct 8355 TCGTCTTCGTATTTTATGTATAATTTATCAAATTTATCTCCATAAATTTCACACAAGCCA 8296 Query 66015 GGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAG 66074 || |||| || |||||||| | ||||| | | ||| ||| |||| |||||| || Sbjct 8295 GGGCATTTATGGGGACACATTAGAGACCAATGCTCATCAGCCTCTACTCTTTTCATGAAA 8236 Query 66075 AGATCAGGAATCCAAAGAGCTATAAATAAATCTCTGGTTCTATGTTCCTCGTTTCCTGTA 66134 ||||| || ||||| ||||| ||||||||| | | | || ||| || || || ||| Sbjct 8235 AGATCCGGTATCCACAGAGCATAAAATAAATCCCGTGCACGATCTTCTTCTTTACCCGTA 8176 Query 66135 TTCTTTTTAAGATCGAGGAACGCCATAATATCATAATGCCACGGTTCCAAGTATATGGCC 66194 |||||||| | || ||| || | | ||||| |||||| || || |||||||| || Sbjct 8175 TTCTTTTTCAAATTGAGAAATTCGAATATATCTGCATGCCAAGGCTCTAAGTATATAGCA 8116 Query 66195 ATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACT 66254 | | | || || ||||| || || || || | || | || || || | | Sbjct 8115 AAAGCCCCCGGACGTTTTCCACCACCTTGGTCGACATAACGGGCAACATTGTTGAACAGA 8056 Query 66255 CTCAACATTGGAATAATACCATTGG--ATGT-ACCATTGGTCCCGGAGATATAGCTTCCA 66311 | |||||| |||| || |||| | | || ||||| | || || || | | || Sbjct 8055 CGCAACATAGGAACAAGGCCATCAGACACGTCACCAT---TACCAGATATCTTTGTCCCT 7999 Query 66312 CTTGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCG 66371 |||| || | | ||| ||||||||| || || ||| ||||| ||| || Sbjct 7998 TTTGCTCGTACGCAATGAATATTTAGACCTATCCCACCGGCCGACTTAGAAATTTTAGCA 7939 Query 66372 CATCGTTTTA-ACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAA 66430 ||| | | || | ||||| || || || || || ||| ||| | || | || Sbjct 7938 CATTGGTCTACAGCCTTCATA-ATACCATCAATGGAGTCTTCCGGCATAGTTAGCAAGAA 7880 Query 66431 ACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGT 66490 ||| |||| ||| | || | || | ||| |||||| || || ||||| || || Sbjct 7879 GCAGGACGACAATTGTGGGCGTATGGTAGCAGCACCAAATAAAGTTGGGGAAGCATGAGT 7820 Query 66491 AAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATATCCCATTG--A 66548 ||| | || || | ||||| || || |||||||||| || || | ||| | Sbjct 7819 AAAGTAACGCTCCGACATGAGATTATAAGTTTCAATAGCTGCTTCAATGT--CATCGCCG 7762 Query 66549 TGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTT 66608 ||||| || | ||||||||||||||||| || || || | || || || ||| ||| Sbjct 7761 TGAATGCCAATGGCGACACGCATTAACATATGTTGTGGCCGCTCCACAATTTTGCCGTTA 7702 Query 66609 ATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCT 66668 || || || || || || ||| ||||||||||| |||||| | || || ||| || Sbjct 7701 ATCTTTAATAAATAAGACCGTTCTAAAGTTTTAAAGCCAAAAAAATTATAACTAAAATCG 7642 Query 66669 CGTTCGTAAATAATAACCGAGTTGAGTTTATCCTTATATTTGTTAACTACAT--CCATGG 66726 || ||||| |||||| | || || ||| ||| || | | || || | |||| Sbjct 7641 CGATCGTAGATAATAGCAGAATTCAGTCGATCAGCATTCTCTCTTACAACCTTGTAATGG 7582 Query 66727 TAATACTTGAAATAATCGGAGAATGTTTCCCATTTTTAGGATTGACATAGTTGAATAAAT 66786 ||| ||| ||||| || ||| | ||||| | |||| || ||| || Sbjct 7581 AAAT--CTGATATAATAGGGGAAGGAAAGCCATTATCTTCATTGCGAT------ATAGAT 7530 Query 66787 CCTCCATCACTTCACTAAATAGtttttttGTTTCTTTGTGTAGATTTGATACGGCTATTC 66846 | ||||||||| || | ||| |||||||||||||| | ||||| || || || | Sbjct 7529 CAGTTATCACTTCAGAGAAGACTTTCTTTGTTTCTTTGTGCAAGTTTGACACTGCAATAC 7470 Query 66847 TAGCGGCTATAATGGCATAATCCGGATGTTGTGTAGTACAAG-TGGCTGCTATTTCGGCT 66905 ||| |||| ||| ||||| || || || | || || || | || || |||| || Sbjct 7469 GAGCCGCTAAAATAGCATAGTCTGGGTGATCGGTGGT-CATGCAAGCAGCAGTTTCAGCA 7411 Query 66906 GCCAGAGTGTCCAATTCT 66923 || | | | ||||||||| Sbjct 7410 GCTAAATTATCCAATTCT 7393 >seq158 Length=613782 Score = 273 bits (302), Expect = 3e-68 Identities = 489/711 (69%), Gaps = 11/711 (2%) Strand=Plus/Plus Query 35986 CAATCTATCTGCGACAAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAAG 36045 ||| | ||| || ||| ||||||||||| | ||| |||| | ||||| || || | Sbjct 555573 CAAACGATCGGCAACATATTCTATATATTTACACATACTTTCGCTGTTCATGCCAATTAA 555632 Query 36046 TTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACCGCGTCTGTTATAAT 36105 | ||||| | ||| | || | ||| |||| |||||| || || |||||||| || Sbjct 555633 GTCGACTGGTAAGGCCTCTGTCAAAAACTCTTTTTCAATTTTAACGGCATCTGTTATTAT 555692 Query 36106 AGATATTACTGTTTCTTCACTCGGTGGATACAATAAATGTTTAAACATCAAACATGCGAA 36165 | | ||||| |||||| | | |||||||||||||| || || || Sbjct 555693 TTCCAAAATCCGTTCTTTGCTCGGTTTTTGTATCAAATGTTTAAACATTAATACCGCAAA 555752 Query 36166 ATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCAT 36225 || ||||| | || || || | || | ||| || || ||||| | || ||||| Sbjct 555753 TTCACAGTGCAAGCCTTCATCGCGTGATATCATTTCATTAGAGAACGTTAAACCTGGCAT 555812 Query 36226 TAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTTC 36285 || ||||| || || ||||||||||| || || || ||| |||||| || ||||| Sbjct 555813 TATTCCACGTTTCTTTAGCCAAAATATCGAAGCGAAGCTCCCACTAAAGAATATACCTTC 555872 Query 36286 TACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGGC--ACTGTCATG-TATCCACTT 36342 || || || || || |||| | || || || || | || ||| |||||| Sbjct 555873 GACGGCAGCGAAAGCTATAACACGTTCACCGAAATTAGCCGAATGCGATGATATCCAAGC 555932 Query 36343 TTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATTAAAGAGATA 36402 | | ||||| || |||||||| || || | ||||||||||| || |||||||| ||||| Sbjct 555933 TAGTGCCCATTCCGCCTTCTTCTTAACCAATGGCATTGTCTCAATGGCATTAAATAGATA 555992 Query 36403 GtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGACTATACATTTCCGAATG 36462 | ||||| || |||| | | |||||| || || | | ||||||||||||||| || Sbjct 555993 TTCCTTTTCTTTCTCATCTCTGATATATGTTTCGATAAGTAAACTATACATTTCCGAGTG 556052 Query 36463 AATGTTTTCAATGGCCATTTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGTACTTC 36522 | ||||| ||||| |||||||| || || || || | || ||||| || || || || Sbjct 556053 TACATTTTCCATGGCAATTTGAAACCCATAAAAGCAACGTGCTTCGGTTATTTGAACCTC 556112 Query 36523 TGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGC 36582 | |||||||||| ||||||| ||||| || || || || || |||||||| || Sbjct 556113 TTGGGAAAATCGTTCCACTAAATTCTCATTAACAATACCATCGGATGCCGCAAAAAAAGC 556172 Query 36583 CAATACATGTTTTATAAAATATTTTTCGTTTGGTGTTAGTT----TATTCCAATCATTGA 36638 ||| || ||| |||||| | |||| | ||| || ||||||||| | || Sbjct 556173 CAAAACGTGTGAAATAAAA----TGACGTTCGCCATTACTTAACCGATTCCAATCGTCGA 556228 Query 36639 TATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCT 36689 |||||||||| | || |||||||| | |||||||| || || || |||| Sbjct 556229 TATCTTTAGAGAGGTCAACTTCTTCTGCAGTCCAAAAAGAGGCTTCCGCCT 556279 >seq832 Length=79107 Score = 84.2 bits (92), Expect = 3e-11 Identities = 81/104 (78%), Gaps = 0/104 (0%) Strand=Plus/Minus Query 31219 CCTAATTCCTTGACCTGAGTTAATGATCTCCAATCCATATTAGCGCTTCCTAAATAAATA 31278 ||||| || || || || || || ||||||||||||||||| || ||||| | ||||| | Sbjct 62557 CCTAACTCTTTAACTTGGGTCAAAGATCTCCAATCCATATTCGCACTTCCCAGATAAAAA 62498 Query 31279 TGTGTATTATCAGATATCCAAAATTTTGTATGAAGAACTCCTCC 31322 || ||||||| | ||| ||||||||||| | |||||||| Sbjct 62497 TGCTTATTATCTACAACCCATAATTTTGTATGTAAGACTCCTCC 62454 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658140500169840