Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glossina_20palpalis_20gambiensis_20[genbank_20GCA_5F000818775.1_2020 15-01-15] 3,926 sequences; 380,104,241 total letters Query= NC_005905.1 Length=86462 Score E Sequences producing significant alignments: (Bits) Value seq312 96.9 2e-15 >seq312 Length=340915 Score = 96.9 bits (106), Expect = 2e-15 Identities = 182/266 (68%), Gaps = 4/266 (2%) Strand=Plus/Minus Query 3875 GGTGTACATTTTATGATGGCTGACGGTGGGTTCTCGGTTGAGGGTCAAGAAAATATGCAA 3934 || || ||| || | ||||| ||||| || || || ||||| | || || ||||| ||| Sbjct 313004 GGCGTTCATATTGTCATGGCAGACGGCGGATTTTCAGTTGAAAGACAGGAGAATATTCAA 312945 Query 3935 GAAATGTTATCGAAAAAGATGTATTTGTGTCAATGTTTAATTGCATTGATGATCATACGA 3994 ||||| || || ||| | | ||| ||||||| |||||| | | |||| || | || Sbjct 312944 GAAATTTTGTCAAAACAACTCTATCTGTGTCAGTGTTTATTGGGCTTGAAAATATTGAGA 312885 Query 3995 ATTGGTGGTCATTGTGTTATCAAATTTTTCGATATATTTACACCTTTTAGTGCTGGTTTA 4054 || |||| ||| ||||||||| ||| | ||||| ||||||| | ||| | Sbjct 312884 CCCAAAGGACATTTTGTGTGCAAATTTTTTGATGTTTTTACCGCTTTTAGCGTCGGTCTC 312825 Query 4055 GTGTATTTGATGTATAGATCTTTTAATCGTATTTGTATTTTCAAACCACATTCATC--GC 4112 | ||||||||||| | | ||| | || | ||| |||| ||| | || | | Sbjct 312824 ATATATTTGATGTACAATTGCTTTGAGAAAATATCAATTATCAAGCCAAA--CAGCAGTC 312767 Query 4113 GACCGGCCAATTCTGAAAGATATTTG 4138 | || || ||||| |||||||||||| Sbjct 312766 GTCCCGCGAATTCGGAAAGATATTTG 312741 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 276540367428778