Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glossina_20palpalis_20gambiensis_20[genbank_20GCA_5F000818775.1_2020 15-01-15] 3,926 sequences; 380,104,241 total letters Query= NC_007022.1 Length=172963 Score E Sequences producing significant alignments: (Bits) Value seq861 118 1e-21 >seq861 Length=102403 Score = 118 bits (130), Expect = 1e-21 Identities = 208/299 (70%), Gaps = 3/299 (1%) Strand=Plus/Minus Query 6926 CCATGTGTTAAATGACCACCGCAATCCAAAGACATCGCCAATACTGAATCGCCTGGACTC 6985 ||||| |||||||| |||||| | ||| |||| | ||||||| ||| ||||| | Sbjct 29618 CCATGCGTTAAATGCCCACCGTGTTTTAAATCCATCCCTAATACTGTATCTCCTGGTTTG 29559 Query 6986 AGCAACGCATGGTAAACAGCTTGGTTTGCCTGTGAACCGGAATGGGGTTGAACGTTTGCG 7045 || | ||| || || || |||||||||||||| ||||| ||||| || || || Sbjct 29558 AGTAGTGCAGAATATACGGCGAAATTTGCCTGTGAACCTGAATGCGGTTGTACATTAGCA 29499 Query 7046 AAAT-TGCAACTAAACAGTTCTTTAGCACGCTCAATTGCCAGGTTCTCGATCTCATCGGC 7104 ||| ||| | |||| | |||||| || | |||||| | || || || | ||| Sbjct 29498 TAATCTGC-ATTAAATAAAGATTTAGCTCGTTTAATTGCTAAATTTTCAATTTTATCTAT 29440 Query 7105 TTTTACACAACCGCCGTAATACCGTTTGCCTGGATATCCCTCAGCATACTTGTTGGTAAA 7164 | | |||| || || ||||| | ||| ||||||||| |||||||| || || || || Sbjct 29439 ATGTGCACATCCTCCATAATATCTTTTATTTGGATATCCTTCAGCATATTTATTAGTTAA 29380 Query 7165 AATAGAACCTTGCGCTTTCATAACATCATCGGACACATAGTTTTCGGATGCAATCAAGC 7223 | |||||||| | ||| |||| | ||||| ||||| |||||||| |||| Sbjct 29379 TAATGAACCTTGAAGATACATCACATATTTACTAACATAATTTTCAGATGCAAT-AAGC 29322 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 553326444172080