Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glossina_20palpalis_20gambiensis_20[genbank_20GCA_5F000818775.1_2020 15-01-15] 3,926 sequences; 380,104,241 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq197 513 2e-140 seq961 464 8e-126 seq362 459 3e-124 seq158 275 8e-69 seq832 84.2 3e-11 seq4 82.4 1e-10 >seq197 Length=390979 Score = 513 bits (568), Expect = 2e-140 Identities = 1404/2130 (66%), Gaps = 44/2130 (2%) Strand=Plus/Minus Query 61841 TTGTCCAATGTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCC 61900 || || | ||| || || ||||| | ||| || || || |||||| ||||| || Sbjct 299261 TTATCGACTGTAAAATGTGTGGGATTCGCTGCTGGCTTTGTTTTTAGATAATACATACCG 299202 Query 61901 GTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGGA 61960 || |||| |||| ||||||| |||||||| ||| | | ||| |||||| || Sbjct 299201 GTCTTTAAACCGGCTTTCCATCCATAAAAATGTATAGAAGACAATTTACCATAACTAGGT 299142 Query 61961 TCTGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCC 62020 || |||| || ||||| | ||||| ||||| |||||||| || || | || |||||| Sbjct 299141 TCAGCTACGTGTATATTGAATGATTGGCTTTGGTCGATGAAAGCACCGCGATCGGCAGCC 299082 Query 62021 ATTTTTATAATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCT 62080 || || || | | || | ||||||||||| |||||||| | | || ||| Sbjct 299081 ATGTTAATGGTTGATTTCACCGAAATTTCCCAAACCGTTTTATACAATTCTTTTATACTA 299022 Query 62081 TCTGGAAGG---TTTGTATTCTGAATGGATCCACCATCTGCCATAATCCTATTCTTGATC 62137 || || | | | | || || || || || | || ||||| || || || || Sbjct 299021 TCAGGTATGGCCTCAATGTTTTGTATTGAGCCGCGATGTGCCAATATTAAGTTTTTCATG 298962 Query 62138 TCATCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGA 62197 ||||||||||| | || || ||| || | || | ||| |||| || || | Sbjct 298961 TCATCATTCCAAAGGCGCAATTCAGTCAAATCTTTGAGCAAATGATGATTGACGACAATA 298902 Query 62198 AATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACAGACTCA 62257 ||||| || |||||||| | || ||||||| || || ||||| || | |||||| Sbjct 298901 AATTCACCGGACAATACACGTCGTGTGTAAACGTTTGACGTGTACGGCTCAAAAGACTCG 298842 Query 62258 TTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTT 62317 ||||| || | |||||||||||| || || || ||||| ||||| |||| || ||| Sbjct 298841 TTATTACCAAGAATTTGAGCAGTGGACGCGGTAGGCATTGGTGCTACCAGCAAGGAATTG 298782 Query 62318 CTAAGACCGTATGTTCTGATTTTATCTTTTAGAGGTTCCCAATTCCAAAGATCCGACGGT 62377 | | || || | | || | ||||| |||| ||||||||| ||||| | || Sbjct 298781 CGCACTCCATAACTCTTAATGTCGTCTTTAAGAGCCGACCAATTCCATAGATCAGTAGGC 298722 Query 62378 ACAACNNNNNNNNNNNNNNNTTGTAGAATACCGTTACTGGC-GTACGATCCTACATATGT 62436 ||| ||||| || ||||| | | || | ||| ||||||| Sbjct 298721 GTTTTATCCCACATATCATATTGAAGAATGCCTTTACTAACTGGACTA-CCTTCATATGT 298663 Query 62437 ATCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGTAATAAAT 62496 ||||| || || | | | || | |||||||| |||||||| ||||| ||||| || Sbjct 298662 TTCGTAAGGACCGTATTGTTTGGCCAACTCACAACTAGCCTCTAAAGCACCATAATATAT 298603 Query 62497 GGTTTCGAAGATCTTCTTATTTAGATCTTGC-GCTTCCAGGCTATCAAATGGATAATTTA 62555 |||||| || || | ||||||| | | || || | | ||| ||| | || ||| | Sbjct 298602 GGTTTCAAAAATTTGTTTATTTA-AGCGAGCAGCATTCTCGCTTTCATAGGGGTAACGCA 298544 Query 62556 AGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTAT 62615 | ||| | ||||| || |||||||| ||||| |||||||| || | ||| | || Sbjct 298543 TTAAAATTAGTGCGTCAGCAAATCCTTGGACACCTATACCGATTGGACGATGACGTAAAT 298484 Query 62616 TAGAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTTC 62675 |||| ||| ||||| || | ||||||||||| | || || || || || ||||||| Sbjct 298483 TAGATTTTTTGGCTTCCGGCAGCGGATAATAATTGACGTCGATTATCTTGTTAAGATTTC 298424 Query 62676 TGACAATTA-CTTTGACCACATCCTTCAGTTTGAGAAAATCAAATCGCCCATCTATT--- 62731 | || | ||||| | || || |||||||| | |||||| || | |||| | Sbjct 298423 TTGTTATAAGCTTTG-CAACTTCTTTCAGTTTCTGGAAATCATATTGTTTATCTGTCGTC 298365 Query 62732 ACAAACATGTTCAATGCAACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCA 62791 || ||||| |||| |||| || |||||||| ||||| |||| || | ||| || | Sbjct 298364 ACGAACATATTCACCGCAATTGAGGCCAGATTGCAAACTGCTATTTCCTCAGCCGACGTA 298305 Query 62792 TATTGTATTATCTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTA 62851 |||| | || || || || | ||||| || || || || || | ||| ||||||||| Sbjct 298304 TATTCGACAATTTCTGTACACAAGTTACTGCATTTTATTGTGCCAACATTCTGTTGATTA 298245 Query 62852 CTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAG-A 62910 || || ||||| ||||| || ||||| ||| | ||||| || || || | || | | Sbjct 298244 CTTTTGCGATTACAAGCATCTTTGTAAAGCATGTAAGGAGTTCCGGTCTCTAGTTGGGCA 298185 Query 62911 TTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAGATTTGTATCTCTTTTCTCT 62970 | ||| | || ||| | | ||||| |||||| | ||| | || |||| | || Sbjct 298184 CTGCATATT-GCGAACCACAACTCACGAGCTTTTATTGT---TTTAT-TCGCTTTACCCT 298130 Query 62971 ----TTCGTATAGTGTATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAGTCCAG 63026 ||| ||| | | |||||| || || | |||||| | |||| |||| |||| Sbjct 298129 CGTCTTCATATTTTATGTACAATTTATCAAATTTGTCTCCATATACATCTTCCAAGCCAG 298070 Query 63027 GACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGA 63086 | |||| || || ||||| || ||||| | | ||| | | ||||| |||||| || | Sbjct 298069 GGCATTTATGGGGGCACATTAAAGACCAATGCTCATCAGCTTCCACTCTTTTCATGAATA 298010 Query 63087 GATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTAT 63146 ||| || ||||| ||||| | ||||| ||| | | | || |||||| || || |||| Sbjct 298009 AATCTGGTATCCACAGAGCAAAAAATAAATCCCGTGCACGATCTTCCTCTTTGCCCGTAT 297950 Query 63147 TCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCA 63206 ||||||| | || || || | | |||||| | ||||| ||||| ||||| || || | Sbjct 297949 TCTTTTTCAAGTCAAGAAATTCGAAAATATCTGCGTGCCAAGGTTCTAAGTAGATAGCAA 297890 Query 63207 TAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTC 63266 | || |||| | || | |||| || || | || || || | || | Sbjct 297889 GTGCACCTCTACGTTGTCTGCCATCTTGATGTACATAACAGGCAAGATTGTTGAAGACGC 297830 Query 63267 TCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCTGAGATATAGCTTCCACTGG 63326 |||||| |||| || |||||| ||| ||||| || || || || | | || | | Sbjct 297829 GCAACATAGGAACAAGACCATTCGATACGCCATTAGTACCGGATATCTTCGTACCTTTTG 297770 Query 63327 CACGAAT--ATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCA 63384 | || || | | ||| ||| |||| || || | | ||| || ||| || || Sbjct 297769 CTCGTATGCAATGGACATT--CAGAGCTATGCCACCCGTCGATTTGGAAATTTCAGCACA 297712 Query 63385 TCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCAT-GTTAAGTAGAAAAC 63443 | | ||| | | | | ||||| || || || ||| ||| ||||| || |||| Sbjct 297711 TTGCCTTACAGCCTTAAAAATGCCATCAATGGAGTCTTCCGGCATCGTTAACAAG-AAAC 297653 Query 63444 AGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGAGTAA 63503 || |||| ||| | ||| | || | ||| |||||| || | ||||| ||||| | Sbjct 297652 AGGATGACAGTTGCGGGCGAATTGTAGCAGCACCAAATAAAGTTGAGGAAGCATGAGTGA 297593 Query 63504 ACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATATCCCATTGATGAA 63563 | | || || | |||||||| || || ||||||| || || || |||| Sbjct 297592 AGTAACGCTCCGACATGAGATTGTAAGTTTCGATAGCTGCCTCAATGTCGTCGCCGTGAA 297533 Query 63564 TTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTT 63623 | || | ||||||||||||||||| || || || | || || || || || || | Sbjct 297532 TGCCAATGGCGACACGCATTAACATATGTTGTGGCCGCTCCACAATTTTCCCATTAATCT 297473 Query 63624 TCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA--TGAAAAGTCTCG 63681 | ||||| || || ||| || ||||| || |||||| | ||||| ||||| || || Sbjct 297472 TTAACAAATAAGACCGTTCTAATGTTTTGAAGCCAAAAAAATTGTAACTGAAA--TCGCG 297415 Query 63682 TTCGTAAATAATAACCGAGTTGAGTTTATCCTTATATTTGTTAACTACAT--CCATGGTA 63739 || |||||||| |||| || ||| ||| || | || || || | |||||| Sbjct 297414 ATCATAAATAATGGCCGAATTTAGTCGATCAGCATGCTCTTTTACAACCTTGTAATGGTA 297355 Query 63740 ATACTTGAAATAATAGGAAAATGTTTCCCATTTTTAGGATTGACATAGTTGAATAAATCC 63799 || ||| |||||||| || | ||||| || ||| || || ||| Sbjct 297354 AT--CTGATATAATAGGCGAAGGACAGCCATT------ATCTTCATTGTGATGTAGATCA 297303 Query 63800 TCCATCACTTCACTAAATAGtttttttGTTTCTTTGTGTAGATTTGATACGGCTATTCTA 63859 ||||||||| |||| ||| ||||||||||| || | |||||||| || || | Sbjct 297302 CTTATCACTTCAGAGAATACTTTCTTTGTTTCTTTATGCAAGTTTGATACAGCAATACGG 297243 Query 63860 GCGGCTAGAATGGCATAATCCGGATGTTGTGTAGTACAAG-TGGCTGCTATTTCGGCTGC 63918 ||||||| ||| ||||| ||||| || | || || || | ||| || ||||||| || Sbjct 297242 GCGGCTAAAATAGCATAGTCCGGGTGATCGGTGGT-CATGCAGGCCGCAGTTTCGGCAGC 297184 Query 63919 CAGAGTGTCCAATTCTACCGTTGTTACACC 63948 | | | ||||||||| ||| || || || Sbjct 297183 TAAATTATCCAATTCTTGCGTGGTGACGCC 297154 >seq961 Length=34630 Score = 464 bits (514), Expect = 8e-126 Identities = 1386/2118 (65%), Gaps = 48/2118 (2%) Strand=Plus/Plus Query 61841 TTGTCCAATGTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCC 61900 || || | ||| ||||| |||||| | ||| || || || | ||| || ||||| || Sbjct 3248 TTATCGACTGTAAATTGTATGGGATTTGCTGCTGGCTTTGTTCTTAGGTAATACATACCG 3307 Query 61901 GTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGGA 61960 ||||| | |||| ||||||| |||||||| ||| | || ||| |||||| || Sbjct 3308 GTTTTCAAACCGGCCTTCCATCCATAAAAATGTATAGAAGATAATTTACCATAACTAGGT 3367 Query 61961 TCTGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCC 62020 || |||| || || || | ||||||||||| |||||||| || || | || ||||| Sbjct 3368 TCAGCTACGTGTATGTTAAACGATTGACTTTGGTCGATGAAAGCGCCGCGATCAACAGCC 3427 Query 62021 ATTTTTATAATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCT 62080 || || || | | ||| | ||||||||||| |||||||| | | || || Sbjct 3428 ATGTTAATGGTTGATTTTACCGAAATTTCCCAAACCGTTTTATATAATTCTTTTATGCTG 3487 Query 62081 TCTGGAAGG--TTTG-TATTCTGAATGGATCCACCATCTGCCATAATCCTATTCTTGATC 62137 || || | | || | | || || || || || | || ||||| || || || || Sbjct 3488 TCAGGTATGGCTTCGATGTTTTGTATTGAGCCGCGATGTGCCAATATTAAGTTTTTCATG 3547 Query 62138 TCATCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGA 62197 | ||||||||| | || || ||| || |||| | ||| |||| || || | Sbjct 3548 TTATCATTCCAAAGGCCCAATTCAGTCAAATCTTTAAGCAAATGATGATTGACCACGATA 3607 Query 62198 AATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACAGACTCA 62257 || || ||||||| ||| | || ||||||| || || || || || | |||||| Sbjct 3608 AACTCACCAGACAGTACGCGTCGTGTGTAAACGTTTGAAGTGTATGGCTCAAAAGACTCG 3667 Query 62258 TTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTT 62317 || || || | |||||||||||| || || || ||||| || || |||| ||| ||| Sbjct 3668 TTGTTACCAAGAATTTGAGCAGTAGACGCCGTAGGCATTGGAGCTACCAGCAAAGAATTG 3727 Query 62318 CTAAGACCGTATGTTCTGATTTTATCTTTTAGAGGTTCCCAATTCCAAAGATCCGACGGT 62377 | | || || || | || | ||||| |||| ||||||||| ||||| | || Sbjct 3728 CGCACTCCATAACTTTTAATGTCGTCTTTAAGAGCCGACCAATTCCATAGATCAGTAGGC 3787 Query 62378 ACAACNNNNNNNNNNNNNNNTTGTAGAATACCGTTACTGGC-GTACGATCCTACATATGT 62436 ||| || ||||| ||||| | | || | ||| |||| || Sbjct 3788 GTTTTATCCCACATATCATATTGAAGGATACCTTTACTAACTGGACTA-CCTTCATAGGT 3846 Query 62437 ATCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGTAATAAAT 62496 ||||| || || | || | || | ||||||||| || ||||| ||||| ||||| || Sbjct 3847 TTCGTACGGACCGTACTGTTTGGCCAATTCACAACTAGCTTCTAAGGCACCATAATATAT 3906 Query 62497 GGTTTCGAAGATCTTCTTATTTAGATCTTGCG---CTTCCAGGCTATCAAATGGATAATT 62553 ||||| || || | ||||||| | | ||| ||| | ||| ||| | |||||| Sbjct 3907 TGTTTCAAAAATTTGTTTATTTA-AGCGTGCAGCACTTTC--GCTTTCATAGGGATAACG 3963 Query 62554 TAAGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTT 62613 | | ||| | ||||| || |||||||| ||||| | ||| || || | ||| | Sbjct 3964 CATTAAAATTAGTGCGTCAGCAAATCCTTGGACACCTAAACCAATTGGACGATGACGAAA 4023 Query 62614 ATTAGAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATT 62673 |||||| || | ||| | | ||||| ||||| | ||| || || || ||||| || Sbjct 4024 ATTAGACTTTCTGGTTTCCGACAGCGGATAGTAATTGACATCGATTATCTTGTTGAGGTT 4083 Query 62674 TCTGACAATTACTTTGACCACATCCTTCAGTTTGAGAAAATCAAATCGCCCATCTATT-- 62731 ||| || | ||| | || || || |||||| |||||||| || | |||| | Sbjct 4084 TCTTGTTATAAGCTTGGCAACTTCTTTGAGTTTGTGAAAATCATATTGTTTATCTGTGGT 4143 Query 62732 -ACAAACATGTTCAATGCAACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGC 62790 || ||||| ||||| |||| || || ||||| ||||| |||| || | ||| | Sbjct 4144 CACGAACATATTCAACGCAATTGAGGCTAGATTGCAAACTGCTATTTCTTCAGCTGATGT 4203 Query 62791 ATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATT 62850 ||||| | ||| || || || | ||||| || || || || || | ||| |||||||| Sbjct 4204 ATATTCGACTATTTCTGTACACAAGTTACTGCATTTTATAGTGCCAACATTCTGTTGATT 4263 Query 62851 ACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAG- 62909 ||| || ||||| ||||| || ||||| ||| | ||||| || || || | |||| Sbjct 4264 ACTTTTACGATTACAAGCATCTTTGTAAAGCATGTAAGGAGTCCCGGTCTCTACTTGAGC 4323 Query 62910 ATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAGATTTGTATCTCTTTTCTC 62969 | | ||| | || ||| | | ||||| |||||| | ||| | || |||| | | Sbjct 4324 ACTGCATATT-GCGAACCATAAATCACGAGCTTTTATTGT---TTTAT-TCGCTTTGCCC 4378 Query 62970 T----TTCGTATAGTGTATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAGTCCA 63025 | ||||||| | | || ||| || || | ||||| ||| | || ||| Sbjct 4379 TCGTCTTCGTATTTTATGTATAATTTATCAAATTTATCTCCATAAATTTCACACAAGCCA 4438 Query 63026 GGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAG 63085 || |||| || |||||||| | ||||| | | ||| ||| |||| |||||| || Sbjct 4439 GGGCATTTATGGGGACACATTAGAGACCAATGCTCATCAGCCTCTACTCTTTTCATGAAA 4498 Query 63086 AGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTA 63145 ||||| || ||||| ||||| ||||| ||| | | | || ||| || || || ||| Sbjct 4499 AGATCCGGTATCCACAGAGCATAAAATAAATCCCGTGCACGATCTTCTTCTTTACCCGTA 4558 Query 63146 TTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCC 63205 |||||||| | || ||| || | | ||||| | |||||| || || |||||||| || Sbjct 4559 TTCTTTTTCAAATTGAGAAATTCGAATATATCTGCATGCCAAGGCTCTAAGTATATAGCA 4618 Query 63206 ATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACT 63265 | | | || || ||||| || || || || | || | || || || | | Sbjct 4619 AAAGCCCCCGGACGTTTTCCACCACCTTGGTCGACATAACGGGCAACATTGTTGAACAGA 4678 Query 63266 CTCAACATTGGAATAATACCATTGG--ATGT-ACCATTGGTCCCTGAGATATAGCTTCCA 63322 | |||||| |||| || |||| | | || ||||| | || || || | | || Sbjct 4679 CGCAACATAGGAACAAGGCCATCAGACACGTCACCAT---TACCAGATATCTTTGTCCCT 4735 Query 63323 CTGGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCG 63382 | || || | | ||| ||||||||| || || ||| ||||| ||| || Sbjct 4736 TTTGCTCGTACGCAATGAATATTTAGACCTATCCCACCGGCCGACTTAGAAATTTTAGCA 4795 Query 63383 CATCGTTTTA-ACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAA 63441 ||| | | || | ||||| || || || || || ||| ||| | || | || Sbjct 4796 CATTGGTCTACAGCCTTCATA-ATACCATCAATGGAGTCTTCCGGCATAGTTAGCAAGAA 4854 Query 63442 ACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGAGT 63501 ||| |||| ||| | || | || | ||| |||||| || || ||||| ||||| Sbjct 4855 GCAGGACGACAATTGTGGGCGTATGGTAGCAGCACCAAATAAAGTTGGGGAAGCATGAGT 4914 Query 63502 AAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATATCCCATTG--A 63559 ||| | || || | ||||| || || |||||||||| || || | ||| | Sbjct 4915 AAAGTAACGCTCCGACATGAGATTATAAGTTTCAATAGCTGCTTCAATGT--CATCGCCG 4972 Query 63560 TGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTT 63619 ||||| || | ||||||||||||||||| || || || | || || || ||| ||| Sbjct 4973 TGAATGCCAATGGCGACACGCATTAACATATGTTGTGGCCGCTCCACAATTTTGCCGTTA 5032 Query 63620 ATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCT 63679 || || || || || || ||| ||||||||||| |||||| | || || ||| || Sbjct 5033 ATCTTTAATAAATAAGACCGTTCTAAAGTTTTAAAGCCAAAAAAATTATAACTAAAATCG 5092 Query 63680 CGTTCGTAAATAATAACCGAGTTGAGTTTATCCTTATATTTGTTAACTACAT--CCATGG 63737 || ||||| |||||| | || || ||| ||| || | | || || | |||| Sbjct 5093 CGATCGTAGATAATAGCAGAATTCAGTCGATCAGCATTCTCTCTTACAACCTTGTAATGG 5152 Query 63738 TAATACTTGAAATAATAGGAAAATGTTTCCCATTTTTAGGATTGACATAGTTGAATAAAT 63797 ||| ||| |||||||| || | ||||| | |||| || ||| || Sbjct 5153 AAAT--CTGATATAATAGGGGAAGGAAAGCCATTATCTTCATTGCGAT------ATAGAT 5204 Query 63798 CCTCCATCACTTCACTAAATAGtttttttGTTTCTTTGTGTAGATTTGATACGGCTATTC 63857 | ||||||||| || | ||| |||||||||||||| | ||||| || || || | Sbjct 5205 CAGTTATCACTTCAGAGAAGACTTTCTTTGTTTCTTTGTGCAAGTTTGACACTGCAATAC 5264 Query 63858 TAGCGGCTAGAATGGCATAATCCGGATGTTGTGTAGTACAAG-TGGCTGCTATTTCGGCT 63916 ||| |||| ||| ||||| || || || | || || || | || || |||| || Sbjct 5265 GAGCCGCTAAAATAGCATAGTCTGGGTGATCGGTGGT-CATGCAAGCAGCAGTTTCAGCA 5323 Query 63917 GCCAGAGTGTCCAATTCT 63934 || | | | ||||||||| Sbjct 5324 GCTAAATTATCCAATTCT 5341 >seq362 Length=381446 Score = 459 bits (508), Expect = 3e-124 Identities = 1385/2118 (65%), Gaps = 48/2118 (2%) Strand=Plus/Minus Query 61841 TTGTCCAATGTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCC 61900 || || | ||| ||||| |||||| | ||| || || || | ||| || ||||| || Sbjct 9486 TTATCGACTGTAAATTGTATGGGATTTGCTGCTGGCTTTGTTCTTAGGTAATACATACCG 9427 Query 61901 GTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGGA 61960 ||||| | |||| ||||||| |||||||| ||| | || ||| |||||| || Sbjct 9426 GTTTTCAAACCGGCCTTCCATCCATAAAAATGTATAGAAGATAATTTACCATAACTAGGT 9367 Query 61961 TCTGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCC 62020 || |||| || || || | ||||||||||| |||||||| || || | || ||||| Sbjct 9366 TCAGCTACGTGTATGTTAAACGATTGACTTTGGTCGATGAAAGCGCCGCGATCAACAGCC 9307 Query 62021 ATTTTTATAATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCT 62080 || || || | | ||| | ||||||||||| |||||||| | | || || Sbjct 9306 ATGTTAATGGTTGATTTTACCGAAATTTCCCAAACCGTTTTATATAATTCTTTTATGCTG 9247 Query 62081 TCTGGAAGG--TTTG-TATTCTGAATGGATCCACCATCTGCCATAATCCTATTCTTGATC 62137 || || | | || | | || || || || || | || ||||| || || || || Sbjct 9246 TCAGGTATGGCTTCGATGTTTTGTATTGAGCCGCGATGTGCCAATATTAAGTTTTTCATG 9187 Query 62138 TCATCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGA 62197 | ||||||||| | || || ||| || |||| | ||| |||| || || | Sbjct 9186 TTATCATTCCAAAGGCCCAATTCAGTCAAATCTTTAAGCAAATGATGATTGACCACGATA 9127 Query 62198 AATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACAGACTCA 62257 || || ||||||| ||| | || ||||||| || || || || || | |||||| Sbjct 9126 AACTCACCAGACAGTACGCGTCGTGTGTAAACGTTTGAAGTGTATGGCTCAAAAGACTCG 9067 Query 62258 TTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTT 62317 || || || | |||||||||||| || || || ||||| || || |||| ||| ||| Sbjct 9066 TTGTTACCAAGAATTTGAGCAGTAGACGCCGTAGGCATTGGAGCTACCAGCAAAGAATTG 9007 Query 62318 CTAAGACCGTATGTTCTGATTTTATCTTTTAGAGGTTCCCAATTCCAAAGATCCGACGGT 62377 | | || || || | || | ||||| |||| ||||||||| ||||| | || Sbjct 9006 CGCACTCCATAACTTTTAATGTCGTCTTTAAGAGCCGACCAATTCCATAGATCAGTAGGC 8947 Query 62378 ACAACNNNNNNNNNNNNNNNTTGTAGAATACCGTTACTGGC-GTACGATCCTACATATGT 62436 ||| || ||||| ||||| | | || | ||| |||| || Sbjct 8946 GTTTTATCCCACATATCATATTGAAGGATACCTTTACTAACTGGACTA-CCTTCATAGGT 8888 Query 62437 ATCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGTAATAAAT 62496 ||||| || || | || | || | ||||||||| || ||||| ||||| ||||| || Sbjct 8887 TTCGTACGGACCGTACTGTTTGGCCAATTCACAACTAGCTTCTAAGGCACCATAATATAT 8828 Query 62497 GGTTTCGAAGATCTTCTTATTTAGATCTTGCG---CTTCCAGGCTATCAAATGGATAATT 62553 ||||| || || | ||||||| | | ||| ||| | ||| ||| | |||||| Sbjct 8827 TGTTTCAAAAATTTGTTTATTTA-AGCGTGCAGCACTTTC--GCTTTCATAGGGATAACG 8771 Query 62554 TAAGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTT 62613 | | ||| | ||||| || |||||||| ||||| | ||| || || | ||| | Sbjct 8770 CATTAAAATTAGTGCGTCAGCAAATCCTTGGACACCTAAACCAATTGGACGATGACGAAA 8711 Query 62614 ATTAGAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATT 62673 |||||| || | ||| | | ||||| ||||| | ||| || || || ||||| || Sbjct 8710 ATTAGACTTTCTGGTTTCCGACAGCGGATAGTAATTGACATCGATTATCTTGTTGAGGTT 8651 Query 62674 TCTGACAATTACTTTGACCACATCCTTCAGTTTGAGAAAATCAAATCGCCCATCTATT-- 62731 ||| || | ||| | || || || |||||| |||||||| || | |||| | Sbjct 8650 TCTTGTTATAAGCTTGGCAACTTCTTTGAGTTTGTGAAAATCATATTGTTTATCTGTGGT 8591 Query 62732 -ACAAACATGTTCAATGCAACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGC 62790 || ||||| ||||| |||| || || ||||| ||||| |||| || | ||| | Sbjct 8590 CACGAACATATTCAACGCAATTGAGGCTAGATTGCAAACTGCTATTTCTTCAGCTGATGT 8531 Query 62791 ATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATT 62850 ||||| | || || || || | ||||| || || || || || | ||| |||||||| Sbjct 8530 ATATTCGACGATTTCTGTACACAAGTTACTGCATTTTATAGTGCCAACATTCTGTTGATT 8471 Query 62851 ACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAG- 62909 ||| || ||||| ||||| || ||||| ||| | ||||| || || || | |||| Sbjct 8470 ACTTTTACGATTACAAGCATCTTTGTAAAGCATGTAAGGAGTCCCGGTCTCTACTTGAGC 8411 Query 62910 ATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAGATTTGTATCTCTTTTCTC 62969 | | ||| | || ||| | | ||||| |||||| | ||| | || |||| | | Sbjct 8410 ACTGCATATT-GCGAACCATAAATCACGAGCTTTTATTGT---TTTAT-TCGCTTTGCCC 8356 Query 62970 T----TTCGTATAGTGTATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAGTCCA 63025 | ||||||| | | || ||| || || | ||||| ||| | || ||| Sbjct 8355 TCGTCTTCGTATTTTATGTATAATTTATCAAATTTATCTCCATAAATTTCACACAAGCCA 8296 Query 63026 GGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAG 63085 || |||| || |||||||| | ||||| | | ||| ||| |||| |||||| || Sbjct 8295 GGGCATTTATGGGGACACATTAGAGACCAATGCTCATCAGCCTCTACTCTTTTCATGAAA 8236 Query 63086 AGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTA 63145 ||||| || ||||| ||||| ||||| ||| | | | || ||| || || || ||| Sbjct 8235 AGATCCGGTATCCACAGAGCATAAAATAAATCCCGTGCACGATCTTCTTCTTTACCCGTA 8176 Query 63146 TTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCC 63205 |||||||| | || ||| || | | ||||| | |||||| || || |||||||| || Sbjct 8175 TTCTTTTTCAAATTGAGAAATTCGAATATATCTGCATGCCAAGGCTCTAAGTATATAGCA 8116 Query 63206 ATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACT 63265 | | | || || ||||| || || || || | || | || || || | | Sbjct 8115 AAAGCCCCCGGACGTTTTCCACCACCTTGGTCGACATAACGGGCAACATTGTTGAACAGA 8056 Query 63266 CTCAACATTGGAATAATACCATTGG--ATGT-ACCATTGGTCCCTGAGATATAGCTTCCA 63322 | |||||| |||| || |||| | | || ||||| | || || || | | || Sbjct 8055 CGCAACATAGGAACAAGGCCATCAGACACGTCACCAT---TACCAGATATCTTTGTCCCT 7999 Query 63323 CTGGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCG 63382 | || || | | ||| ||||||||| || || ||| ||||| ||| || Sbjct 7998 TTTGCTCGTACGCAATGAATATTTAGACCTATCCCACCGGCCGACTTAGAAATTTTAGCA 7939 Query 63383 CATCGTTTTA-ACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAA 63441 ||| | | || | ||||| || || || || || ||| ||| | || | || Sbjct 7938 CATTGGTCTACAGCCTTCATA-ATACCATCAATGGAGTCTTCCGGCATAGTTAGCAAGAA 7880 Query 63442 ACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGAGT 63501 ||| |||| ||| | || | || | ||| |||||| || || ||||| ||||| Sbjct 7879 GCAGGACGACAATTGTGGGCGTATGGTAGCAGCACCAAATAAAGTTGGGGAAGCATGAGT 7820 Query 63502 AAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATATCCCATTG--A 63559 ||| | || || | ||||| || || |||||||||| || || | ||| | Sbjct 7819 AAAGTAACGCTCCGACATGAGATTATAAGTTTCAATAGCTGCTTCAATGT--CATCGCCG 7762 Query 63560 TGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTT 63619 ||||| || | ||||||||||||||||| || || || | || || || ||| ||| Sbjct 7761 TGAATGCCAATGGCGACACGCATTAACATATGTTGTGGCCGCTCCACAATTTTGCCGTTA 7702 Query 63620 ATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCT 63679 || || || || || || ||| ||||||||||| |||||| | || || ||| || Sbjct 7701 ATCTTTAATAAATAAGACCGTTCTAAAGTTTTAAAGCCAAAAAAATTATAACTAAAATCG 7642 Query 63680 CGTTCGTAAATAATAACCGAGTTGAGTTTATCCTTATATTTGTTAACTACAT--CCATGG 63737 || ||||| |||||| | || || ||| ||| || | | || || | |||| Sbjct 7641 CGATCGTAGATAATAGCAGAATTCAGTCGATCAGCATTCTCTCTTACAACCTTGTAATGG 7582 Query 63738 TAATACTTGAAATAATAGGAAAATGTTTCCCATTTTTAGGATTGACATAGTTGAATAAAT 63797 ||| ||| |||||||| || | ||||| | |||| || ||| || Sbjct 7581 AAAT--CTGATATAATAGGGGAAGGAAAGCCATTATCTTCATTGCGAT------ATAGAT 7530 Query 63798 CCTCCATCACTTCACTAAATAGtttttttGTTTCTTTGTGTAGATTTGATACGGCTATTC 63857 | ||||||||| || | ||| |||||||||||||| | ||||| || || || | Sbjct 7529 CAGTTATCACTTCAGAGAAGACTTTCTTTGTTTCTTTGTGCAAGTTTGACACTGCAATAC 7470 Query 63858 TAGCGGCTAGAATGGCATAATCCGGATGTTGTGTAGTACAAG-TGGCTGCTATTTCGGCT 63916 ||| |||| ||| ||||| || || || | || || || | || || |||| || Sbjct 7469 GAGCCGCTAAAATAGCATAGTCTGGGTGATCGGTGGT-CATGCAAGCAGCAGTTTCAGCA 7411 Query 63917 GCCAGAGTGTCCAATTCT 63934 || | | | ||||||||| Sbjct 7410 GCTAAATTATCCAATTCT 7393 >seq158 Length=613782 Score = 275 bits (304), Expect = 8e-69 Identities = 490/710 (69%), Gaps = 9/710 (1%) Strand=Plus/Plus Query 32489 CAATCTATCTGCGACAAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAAG 32548 ||| | ||| || ||| ||||||||||| | ||| |||| | ||||| || || | Sbjct 555573 CAAACGATCGGCAACATATTCTATATATTTACACATACTTTCGCTGTTCATGCCAATTAA 555632 Query 32549 TTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACCGCGTCTGTTATAAT 32608 | ||||| | ||| | || | ||| |||| |||||| || || |||||||| || Sbjct 555633 GTCGACTGGTAAGGCCTCTGTCAAAAACTCTTTTTCAATTTTAACGGCATCTGTTATTAT 555692 Query 32609 AGATCTTA---CTGTTTCTTCACTCGGTGGATACAATAAATGTTTAAACATCAAACATGC 32665 || | | ||| ||| |||||| | | |||||||||||||| || || Sbjct 555693 T--TCCAAAATCCGTT-CTTTGCTCGGTTTTTGTATCAAATGTTTAAACATTAATACCGC 555749 Query 32666 GAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGG 32725 || || ||||| | || || || | || | ||| || || ||||| | || || Sbjct 555750 AAATTCACAGTGCAAGCCTTCATCGCGTGATATCATTTCATTAGAGAACGTTAAACCTGG 555809 Query 32726 CATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCC 32785 ||||| ||||| || || ||||||||||| || || || ||| |||||| || || Sbjct 555810 CATTATTCCACGTTTCTTTAGCCAAAATATCGAAGCGAAGCTCCCACTAAAGAATATACC 555869 Query 32786 TTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGGCGC--TGTCATG-TATCCA 32842 ||| || || || || || |||| | || || || || || ||| |||||| Sbjct 555870 TTCGACGGCAGCGAAAGCTATAACACGTTCACCGAAATTAGCCGAATGCGATGATATCCA 555929 Query 32843 CTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATTAAAGAG 32902 | | ||||| || |||||||| || || | ||||||||||| || |||||||| || Sbjct 555930 AGCTAGTGCCCATTCCGCCTTCTTCTTAACCAATGGCATTGTCTCAATGGCATTAAATAG 555989 Query 32903 ATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGACTATACATTTCCGA 32962 ||| | ||||| || |||| | | |||||| || || | | ||||||||||||||| Sbjct 555990 ATATTCCTTTTCTTTCTCATCTCTGATATATGTTTCGATAAGTAAACTATACATTTCCGA 556049 Query 32963 ATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAGCATCTAGCCTCGGTAATCTGTAC 33022 || | ||||| ||||| |||||||| || || ||||| | || ||||| || || || Sbjct 556050 GTGTACATTTTCCATGGCAATTTGAAACCCATAAAAGCAACGTGCTTCGGTTATTTGAAC 556109 Query 33023 TTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAA 33082 ||| |||||||||| ||||||| ||||| || || || || || |||||||| Sbjct 556110 CTCTTGGGAAAATCGTTCCACTAAATTCTCATTAACAATACCATCGGATGCCGCAAAAAA 556169 Query 33083 CGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTTAGTTTATTCCAATCATTGAT 33142 ||||| || ||| ||||||| |||| | ||| ||||||||| | ||| Sbjct 556170 AGCCAAAACGTGTGAAATAAAATGACGTTCGCCATTACTTAACCGATTCCAATCGTCGAT 556229 Query 33143 ATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCT 33192 ||||||||| | || |||||||| | |||||||| || || || |||| Sbjct 556230 ATCTTTAGAGAGGTCAACTTCTTCTGCAGTCCAAAAAGAGGCTTCCGCCT 556279 Score = 82.4 bits (90), Expect = 1e-10 Identities = 69/85 (81%), Gaps = 0/85 (0%) Strand=Plus/Plus Query 33190 CCTTTTTATACATATTCCAGATGTCATGATATTGAATTGGAAAAATAACAAATCTATTTG 33249 ||||||||||||| ||||| ||||| ||||||||||||||||||| ||||| | || | Sbjct 557628 CCTTTTTATACATCTTCCATATGTCGGGATATTGAATTGGAAAAATGACAAAACGTTTGG 557687 Query 33250 GATTTTTTGCAAGGATTGGTTCCAT 33274 |||||| | ||| | ||| || || Sbjct 557688 GATTTTCTTTAAGCAATGGCTCTAT 557712 >seq832 Length=79107 Score = 84.2 bits (92), Expect = 3e-11 Identities = 81/104 (78%), Gaps = 0/104 (0%) Strand=Plus/Minus Query 27515 CCTAATTCCTTGACCTGAGTTAATGATCTCCAATCCATATTAGCGCTTCCTAAATAAATA 27574 ||||| || || || || || || ||||||||||||||||| || ||||| | ||||| | Sbjct 62557 CCTAACTCTTTAACTTGGGTCAAAGATCTCCAATCCATATTCGCACTTCCCAGATAAAAA 62498 Query 27575 TGTGTATTATCAGATATCCAAAATTTTGTATGAAGAACTCCTCC 27618 || ||||||| | ||| ||||||||||| | |||||||| Sbjct 62497 TGCTTATTATCTACAACCCATAATTTTGTATGTAAGACTCCTCC 62454 >seq4 Length=3302515 Score = 82.4 bits (90), Expect = 1e-10 Identities = 75/95 (79%), Gaps = 0/95 (0%) Strand=Plus/Plus Query 27524 TTGACCTGAGTTAATGATCTCCAATCCATATTAGCGCTTCCTAAATAAATATGTGTATTA 27583 ||||| || || || ||||||||||||||||| || ||||| | ||||| ||| ||||| Sbjct 275393 TTGACTTGGGTCAAAGATCTCCAATCCATATTCGCACTTCCCAGATAAAAATGCTTATTA 275452 Query 27584 TCAGATATCCAAAATTTTGTATGAAGAACTCCTCC 27618 || | ||| ||||||||||| | |||||||| Sbjct 275453 TCTACAACCCATAATTTTGTATGTAAGACTCCTCC 275487 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633600904509600