Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glossina_20palpalis_20gambiensis_20[genbank_20GCA_5F000818775.1_2020 15-01-15] 3,926 sequences; 380,104,241 total letters Query= NC_009503.1 Length=124121 Score E Sequences producing significant alignments: (Bits) Value seq689 95.1 1e-14 >seq689 Length=105261 Score = 95.1 bits (104), Expect = 1e-14 Identities = 71/81 (88%), Gaps = 2/81 (2%) Strand=Plus/Plus Query 114335 ATGTATT-GCTCTAGAATTACCAC-GTTATCCAAGTAACTGAGTAAGATCTAAGGAACCA 114392 || |||| |||||||||||||||| |||||||||||||||| | |||||||||||||| Sbjct 84898 ATATATTAGCTCTAGAATTACCACAGTTATCCAAGTAACTGTTAACGATCTAAGGAACCA 84957 Query 114393 AAACTGATATATTGAGCCATT 114413 |||||||||| |||||| || Sbjct 84958 TAACTGATATAATGAGCCTTT 84978 Score = 95.1 bits (104), Expect = 1e-14 Identities = 71/81 (88%), Gaps = 2/81 (2%) Strand=Plus/Plus Query 115532 ATGTATT-GCTCTAGAATTACCAC-GTTATCCAAGTAACTGAGTAAGATCTAAGGAACCA 115589 || |||| |||||||||||||||| |||||||||||||||| | |||||||||||||| Sbjct 84898 ATATATTAGCTCTAGAATTACCACAGTTATCCAAGTAACTGTTAACGATCTAAGGAACCA 84957 Query 115590 AAACTGATATATTGAGCCATT 115610 |||||||||| |||||| || Sbjct 84958 TAACTGATATAATGAGCCTTT 84978 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397043401308652