Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glossina_20palpalis_20gambiensis_20[genbank_20GCA_5F000818775.1_2020 15-01-15] 3,926 sequences; 380,104,241 total letters Query= NC_009816.1 Length=70579 Score E Sequences producing significant alignments: (Bits) Value seq734 89.7 2e-13 >seq734 Length=226217 Score = 89.7 bits (98), Expect = 2e-13 Identities = 277/426 (65%), Gaps = 2/426 (0%) Strand=Plus/Minus Query 59910 TCATCGAACATAAGGTAAGGATAGCCAGACTCAAACTGAACCTCTGCGATGGTCTGGAAC 59969 || || ||||||| || ||||| ||||| ||||| |||| || || | | || || Sbjct 77330 TCTTCAAACATAATATATGGATACCCAGATTCAAATTGAATTTCAGCTAATTTTTGAAAA 77271 Query 59970 AGCTTTCGAGCGTCGATAAAGGTCTTAGCGATCCTATCATCTTTTAGCCACGTGTCGTAC 60029 | ||||||||| ||| || || || | | ||||| || | ||| |||| Sbjct 77270 AAACTTCGAGCGTTGATGGCAGTTTTGCTAATGCGTTTATCTTGTAATAAATTGTGGTAC 77211 Query 60030 ATCTCGGTTACGGAGAACTCGGACAGTGACTTTCCGTACACCTTATTGATGTCATAAGGA 60089 | ||| | | || || || | || || || || || | || ||||| ||| Sbjct 77210 AAATCGCTGATAACTAATTCTGAAAATGGCTGATTATAAACTTTTTCAATATCATATGGA 77151 Query 60090 GAGAATAGGGCCATAGGCTCGCT-CTCCTTGGCAAGGCGGAACGTGACATCAGGAACGAT 60148 || |||| ||| |||| | ||| || || | | || || | ||| |||| || Sbjct 77150 GAAAATAAATACATTT-CTCGATTCTCTTTTGCTAATTGAAATGTAATATCTGGAATAAT 77092 Query 60149 AACTCCTAGGGAGAGAGTCTTAATACGGATCTTCTCGTCGGCGTTTTCACGCTTGGTATC 60208 ||||||| || | ||| || || | || || || ||||||||||| ||||||||| Sbjct 77091 TACTCCTAAAGATAAAGTTTTTATTCTAATTTTTTCATCGGCGTTTTCTTTCTTGGTATC 77032 Query 60209 CAGGAACGCAAGGATGTCGGGGTGGTGTGCGTTCAAATATACCGCCCCTGCGCCCTGCCT 60268 | ||| | || || || || || || | || ||||| | ||||| || || | Sbjct 77031 TAAAAACTTTAAAATATCTGGATGATGAGCATGTAAGTATACAGAGCCTGCTCCTTGTCG 76972 Query 60269 TGCACCCAGTTGGTTAGAGTAGGAGAAGCTATCTTCTAGAATCTTCATCACAGGGATGAC 60328 ||||| ||||| |||| || || ||| ||| ||||| || ||||| || || || || Sbjct 76971 CGCACCTAGTTGATTAGCATAAGAAAAGGCATCCTCTAGCATTTTCATTACTGGAATAAC 76912 Query 60329 TCCAGA 60334 || || Sbjct 76911 CCCGGA 76906 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 225717199338440