Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glossina_20palpalis_20gambiensis_20[genbank_20GCA_5F000818775.1_2020 15-01-15] 3,926 sequences; 380,104,241 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq197 188 7e-43 seq362 170 2e-37 seq961 165 8e-36 seq343 109 5e-19 seq394 105 7e-18 seq110 93.3 4e-14 seq180 84.2 2e-11 >seq197 Length=390979 Score = 188 bits (208), Expect = 7e-43 Identities = 703/1083 (65%), Gaps = 23/1083 (2%) Strand=Plus/Minus Query 152685 TCAACGGTAAACTGTTGTGTG-TGCGCCGCAGGCTTTGTGCGCAAATAATACATGCCCGT 152743 || || ||||| ||| ||| | | ||| || |||||||| | ||||||||| || || Sbjct 299258 TCGACTGTAAAATGT-GTGGGATTCGCTGCTGGCTTTGTTTTTAGATAATACATACCGGT 299200 Query 152744 TTTGAGGCCGCAGCGCCACGAGTAATTGTGAATCGAAGTCATCACAGCGTACGTCGGTTG 152803 || | ||| ||| ||| || || |||| || | | || | |||| Sbjct 299199 CTTTAAACCGGCTTTCCATCCATAAAAATGTATAGAAGACAATTTACCATAACTAGGTTC 299140 Query 152804 CGCCACGAACAGATTAAACGATTGGCTCTGATCTATGAAAGCGTTACGGTCGGCCGCCAT 152863 || ||| | ||| || |||||||| || || |||||||| || ||||| ||||| Sbjct 299139 AGCTACGTGTATATTGAATGATTGGCTTTGGTCGATGAAAGCACCGCGATCGGCAGCCAT 299080 Query 152864 CTCAATCATGCGTTTTGCCTTCATCTCCCAGGCGGTTTTGTACAAATTTTTAACGCTATC 152923 | ||| | ||| || || ||||| | ||||| ||||| | ||| | ||||| Sbjct 299079 GTTAATGGTTGATTTCACCGAAATTTCCCAAACCGTTTTATACAATTCTTTTATACTATC 299020 Query 152924 CGGTATACCTTCAATGTTCTGAATAGAGCCCTTGTGTGCAAAAATAGCGTTTCGTATTTC 152983 ||||| | |||||||| || || ||||| ||||| || || |||| || || Sbjct 299019 AGGTATGGCCTCAATGTTTTGTATTGAGCCGCGATGTGCCAATATTAAGTTTTTCATGTC 298960 Query 152984 GGGCGTGTACACGTTCAGTTTAATGAGGTCATCGATCAAGTACTGGTTGACCACTTGAAA 153043 | | | | || || | | | || | || ||| | || ||||| || ||| Sbjct 298959 ATCATTCCAAAGGCGCAATTCAGTCAAATCTTTGAGCAAATGATGATTGACGACAATAAA 298900 Query 153044 CTCGCCCGCCAACACTCGTCTCAAATATACATTGCTAGTGAAAGGTTCAAAGGATTCGTT 153103 || || | ||| || |||| || || || ||| | || ||||| || ||||| Sbjct 298899 TTCACCGGACAATACACGTCGTGTGTAAACGTTTGACGTGTACGGCTCAAAAGACTCGTT 298840 Query 153104 ATTGCCTAGTATTTGAGCCGTGGTTGCGGTCGGCATGTACGCCACCAACAAAGAATTCCG 153163 ||| || || |||||||| |||| ||||| ||||| || |||| ||| ||||| || Sbjct 298839 ATTACCAAGAATTTGAGCAGTGGACGCGGTAGGCATTGGTGCTACCAGCAAGGAATTGCG 298780 Query 153164 CAAGCCGTGCGCTCG-AATGTCGTCCTTCAACGCCTGCCAATCCCACAGCGCCGACGGTG 153222 || || | ||| ||||||||| || | ||| ||||| ||| || | | || | Sbjct 298779 CACTCCATAA-CTCTTAATGTCGTCTTTAAGAGCCGACCAATTCCATAGATCAGTAGGCG 298721 Query 153223 TCGCGTTCCACATGTCGTACTGTAACACTCCTCGACTGGCGGGACTGCCGGCAAACGTAC 153282 | | |||||| || || || | | ||| ||| | ||||| || || | || Sbjct 298720 TTTTATCCCACATATCATATTGAAGAATGCCTTTACTAACTGGACTACCTTCATATGTTT 298661 Query 153283 TGTAGCTGCCGTCGCGTTGGGCCAGTTCGCAGCTAGCCTCGAGCGCGCCATAGTATATGG 153342 ||| |||| ||| ||||| || || |||||||| | || ||||| ||||||| Sbjct 298660 CGTAAGGACCGTATTGTTTGGCCAACTCACAACTAGCCTCTAAAGCACCATAATATATGG 298601 Query 153343 TTTCGGCGATTTGTTTATTGAGAACG-GCCGCTTCTTCGCTCTCGTACGGCATGCGCAGC 153401 |||| ||||||||||| | | || || || | ||||| || || || |||| Sbjct 298600 TTTCAAAAATTTGTTTATTTA-AGCGAGCAGCATTCTCGCTTTCATAGGGGTAACGCATT 298542 Query 153402 AGCACAAAGGCGTCGGCCAGACCCTGGATACCGACGCCGATGGGTCGATG-CTT---CTC 153457 | | | ||||| || | || |||| ||| | ||||| || ||||| | | | Sbjct 298541 AAAATTAGTGCGTCAGCAAATCCTTGGACACCTATACCGATTGGACGATGACGTAAATTA 298482 Query 153458 GTTGCTGCGCCTCGCGCTCGCTATGGGATAGTGATTGCGATCGATAATTTTGTTGAGGTT 153517 | | | | || || || | ||||| | |||| ||||| || ||||| || || Sbjct 298481 GATTTTTTGGCTTCCG---GC-AGCGGATAATAATTGACGTCGATTATCTTGTTAAGATT 298426 Query 153518 GCGCACCACCACTTTAGTTATCGCCTTAAGTTTCTCGAAATCATA--GGTCATTTCGTCG 153575 | | | || | | | || ||||||| ||||||||| | | || | |||| Sbjct 298425 TCTTGTTATAAGCTTTGCAACTTCTTTCAGTTTCTGGAAATCATATTGTTTATCT-GTCG 298367 Query 153576 ACGCGTACGCATCGATTCACGGCAATAGACGCCAGATTACAGACGGCCGTCTCTTC-GGC 153634 | || | ||| |||||| ||||| || |||||||| || || || | || || | | Sbjct 298366 TCACGAA--CAT--ATTCACCGCAATTGAGGCCAGATTGCAAACTGCTATTTCCTCAGCC 298311 Query 153635 GTCGCTGTACTGCACGATCTCGGCGCAGAGGTTGCTGCATTTTATGACGCCCAAATTTTG 153694 | || | || | || || || | || | ||| ||||||||||| ||| | ||| || Sbjct 298310 GACG-TATATTCGACAATTTCTGTACACAAGTTACTGCATTTTATTGTGCCAACATTCTG 298252 Query 153695 CTGATTGCTTTTGCGATTGCACGCGTCTTTGAAGAGCATGTACGGTCCGCCGGTCTCGAC 153754 ||||| ||||||||||| || || |||||| | |||||||| || |||||||| | Sbjct 298251 TTGATTACTTTTGCGATTACAAGCATCTTTGTAAAGCATGTAAGGAGTTCCGGTCTCTAG 298192 Query 153755 TTG 153757 ||| Sbjct 298191 TTG 298189 >seq362 Length=381446 Score = 170 bits (188), Expect = 2e-37 Identities = 616/953 (65%), Gaps = 27/953 (3%) Strand=Plus/Minus Query 152817 TTAAACGATTGGCTCTGATCTATGAAAGCGTTACGGTCGGCCGCCATCTCAATCATGCGT 152876 ||||||||||| || || || ||||||||| || || | ||||| | ||| | | Sbjct 9351 TTAAACGATTGACTTTGGTCGATGAAAGCGCCGCGATCAACAGCCATGTTAATGGTTGAT 9292 Query 152877 TTTGCCTTCATCTCCCAGGCGGTTTTGTACAAATTTTTAACGCTATCCGGTATACCTTCA 152936 ||| || || ||||| | ||||| || || | ||| | ||| || ||||| |||| Sbjct 9291 TTTACCGAAATTTCCCAAACCGTTTTATATAATTCTTTTATGCTGTCAGGTATGGCTTCG 9232 Query 152937 ATGTTCTGAATAGAGCCCTTGTGTGCAAAAAT--AGCGTTTCGTATT-TCGGGCGTGTAC 152993 ||||| || || ||||| ||||| || || || |||| | || || | | Sbjct 9231 ATGTTTTGTATTGAGCCGCGATGTGCCAATATTAAGTTTTTCATGTTATCATTCC---AA 9175 Query 152994 ACGTTCAGTTTAATGAGGTCATCGATCAAGTACTGGTTGACCACTTGAAACTCGCCCGCC 153053 | | || || | | | || | | ||| | || |||||||| |||||| || | | Sbjct 9174 AGGCCCAATTCAGTCAAATCTTTAAGCAAATGATGATTGACCACGATAAACTCACCAGAC 9115 Query 153054 AACACTCGTCTCAAATATACATTGCTAGTGAAAGGTTCAAAGGATTCGTTATTGCCTAGT 153113 | || |||| || || || |||| | || ||||| || ||||| || || || Sbjct 9114 AGTACGCGTCGTGTGTAAACGTTTGAAGTGTATGGCTCAAAAGACTCGTTGTTACCAAGA 9055 Query 153114 ATTTGAGCCGTGGTTGCGGTCGGCATGTACGCCACCAACAAAGAATTCCGCAAGCCGTGC 153173 |||||||| || | || || ||||| || |||| ||||||||| |||| || | Sbjct 9054 ATTTGAGCAGTAGACGCCGTAGGCATTGGAGCTACCAGCAAAGAATTGCGCACTCCATAA 8995 Query 153174 GCTCGAATGTCGTCCTTCAACGCCTGCCAATCCCACAGCGCCGACGGTGTCGCGTTCCAC 153233 | ||||||||| || | ||| ||||| ||| || | | || || | |||| Sbjct 8994 CTTTTAATGTCGTCTTTAAGAGCCGACCAATTCCATAGATCAGTAGGCGTTTTATCCCAC 8935 Query 153234 ATGTCGTACTGTAACACTCCTCGACTGGCGGGACTGCCGGCAAACGTACTGTAGCTGCCG 153293 || || || || | | ||| ||| | ||||| || || | || ||| ||| Sbjct 8934 ATATCATATTGAAGGATACCTTTACTAACTGGACTACCTTCATAGGTTTCGTACGGACCG 8875 Query 153294 TCGCGTTGGGCCAGTTCGCAGCTAGCCTCGAGCGCGCCATAGTATATGGTTTCGGCGATT 153353 | ||| ||||| ||| || ||||| || | || ||||| ||||| ||||| ||| Sbjct 8874 TACTGTTTGGCCAATTCACAACTAGCTTCTAAGGCACCATAATATATTGTTTCAAAAATT 8815 Query 153354 TGTTTATTGAGAACG-GCCGCTTCTTCGCTCTCGTACGGCATGCGCAGCAGCACAAAGGC 153412 |||||||| | | || || || |||||| || || || |||| | | | || Sbjct 8814 TGTTTATTTA-AGCGTGCAGCACTTTCGCTTTCATAGGGATAACGCATTAAAATTAGTGC 8756 Query 153413 GTCGGCCAGACCCTGGATACCGACGCCGATGGGTCGATG------CTTCTCGTTGCTGCG 153466 ||| || | || |||| ||| | || || || ||||| || || ||| | Sbjct 8755 GTCAGCAAATCCTTGGACACCTAAACCAATTGGACGATGACGAAAATTAGACTTTCTG-G 8697 Query 153467 CCTCGCGCTCGCTATGGGATAGTGATTGCGATCGATAATTTTGTTGAGGTTGCGCACCAC 153526 || || | ||||||| |||| |||||| || ||||||||||| | | Sbjct 8696 TTTC-----CGACAGCGGATAGTAATTGACATCGATTATCTTGTTGAGGTTTCTTGTTAT 8642 Query 153527 CACTTTAGTTATCGCCTTAAGTTTCTCGAAATCATA--GGTCATTTCGTCGACGCGTACG 153584 | || | | | || ||||| | |||||||| | | || | || | | || | Sbjct 8641 AAGCTTGGCAACTTCTTTGAGTTTGTGAAAATCATATTGTTTATCT-GTGGTCACGAA-- 8585 Query 153585 CATCGATTCACGGCAATAGACGCCAGATTACAGACGGCCGTCTCTTCGGCGTCGCTGTAC 153644 ||| ||||| ||||| || || ||||| || || || | ||||| || | || Sbjct 8584 CAT--ATTCAACGCAATTGAGGCTAGATTGCAAACTGCTATTTCTTCAGCTGATGTATAT 8527 Query 153645 TGCACGATCTCGGCGCAGAGGTTGCTGCATTTTATGACGCCCAAATTTTGCTGATTGCTT 153704 | ||||| || | || | ||| ||||||||||| ||| | ||| || ||||| ||| Sbjct 8526 TCGACGATTTCTGTACACAAGTTACTGCATTTTATAGTGCCAACATTCTGTTGATTACTT 8467 Query 153705 TTGCGATTGCACGCGTCTTTGAAGAGCATGTACGGTCCGCCGGTCTCGACTTG 153757 || ||||| || || |||||| | |||||||| || |||||||| ||||| Sbjct 8466 TTACGATTACAAGCATCTTTGTAAAGCATGTAAGGAGTCCCGGTCTCTACTTG 8414 >seq961 Length=34630 Score = 165 bits (182), Expect = 8e-36 Identities = 615/953 (65%), Gaps = 27/953 (3%) Strand=Plus/Plus Query 152817 TTAAACGATTGGCTCTGATCTATGAAAGCGTTACGGTCGGCCGCCATCTCAATCATGCGT 152876 ||||||||||| || || || ||||||||| || || | ||||| | ||| | | Sbjct 3383 TTAAACGATTGACTTTGGTCGATGAAAGCGCCGCGATCAACAGCCATGTTAATGGTTGAT 3442 Query 152877 TTTGCCTTCATCTCCCAGGCGGTTTTGTACAAATTTTTAACGCTATCCGGTATACCTTCA 152936 ||| || || ||||| | ||||| || || | ||| | ||| || ||||| |||| Sbjct 3443 TTTACCGAAATTTCCCAAACCGTTTTATATAATTCTTTTATGCTGTCAGGTATGGCTTCG 3502 Query 152937 ATGTTCTGAATAGAGCCCTTGTGTGCAAAAAT--AGCGTTTCGTATT-TCGGGCGTGTAC 152993 ||||| || || ||||| ||||| || || || |||| | || || | | Sbjct 3503 ATGTTTTGTATTGAGCCGCGATGTGCCAATATTAAGTTTTTCATGTTATCATTCC---AA 3559 Query 152994 ACGTTCAGTTTAATGAGGTCATCGATCAAGTACTGGTTGACCACTTGAAACTCGCCCGCC 153053 | | || || | | | || | | ||| | || |||||||| |||||| || | | Sbjct 3560 AGGCCCAATTCAGTCAAATCTTTAAGCAAATGATGATTGACCACGATAAACTCACCAGAC 3619 Query 153054 AACACTCGTCTCAAATATACATTGCTAGTGAAAGGTTCAAAGGATTCGTTATTGCCTAGT 153113 | || |||| || || || |||| | || ||||| || ||||| || || || Sbjct 3620 AGTACGCGTCGTGTGTAAACGTTTGAAGTGTATGGCTCAAAAGACTCGTTGTTACCAAGA 3679 Query 153114 ATTTGAGCCGTGGTTGCGGTCGGCATGTACGCCACCAACAAAGAATTCCGCAAGCCGTGC 153173 |||||||| || | || || ||||| || |||| ||||||||| |||| || | Sbjct 3680 ATTTGAGCAGTAGACGCCGTAGGCATTGGAGCTACCAGCAAAGAATTGCGCACTCCATAA 3739 Query 153174 GCTCGAATGTCGTCCTTCAACGCCTGCCAATCCCACAGCGCCGACGGTGTCGCGTTCCAC 153233 | ||||||||| || | ||| ||||| ||| || | | || || | |||| Sbjct 3740 CTTTTAATGTCGTCTTTAAGAGCCGACCAATTCCATAGATCAGTAGGCGTTTTATCCCAC 3799 Query 153234 ATGTCGTACTGTAACACTCCTCGACTGGCGGGACTGCCGGCAAACGTACTGTAGCTGCCG 153293 || || || || | | ||| ||| | ||||| || || | || ||| ||| Sbjct 3800 ATATCATATTGAAGGATACCTTTACTAACTGGACTACCTTCATAGGTTTCGTACGGACCG 3859 Query 153294 TCGCGTTGGGCCAGTTCGCAGCTAGCCTCGAGCGCGCCATAGTATATGGTTTCGGCGATT 153353 | ||| ||||| ||| || ||||| || | || ||||| ||||| ||||| ||| Sbjct 3860 TACTGTTTGGCCAATTCACAACTAGCTTCTAAGGCACCATAATATATTGTTTCAAAAATT 3919 Query 153354 TGTTTATTGAGAACG-GCCGCTTCTTCGCTCTCGTACGGCATGCGCAGCAGCACAAAGGC 153412 |||||||| | | || || || |||||| || || || |||| | | | || Sbjct 3920 TGTTTATTTA-AGCGTGCAGCACTTTCGCTTTCATAGGGATAACGCATTAAAATTAGTGC 3978 Query 153413 GTCGGCCAGACCCTGGATACCGACGCCGATGGGTCGATG------CTTCTCGTTGCTGCG 153466 ||| || | || |||| ||| | || || || ||||| || || ||| | Sbjct 3979 GTCAGCAAATCCTTGGACACCTAAACCAATTGGACGATGACGAAAATTAGACTTTCTG-G 4037 Query 153467 CCTCGCGCTCGCTATGGGATAGTGATTGCGATCGATAATTTTGTTGAGGTTGCGCACCAC 153526 || || | ||||||| |||| |||||| || ||||||||||| | | Sbjct 4038 TTTC-----CGACAGCGGATAGTAATTGACATCGATTATCTTGTTGAGGTTTCTTGTTAT 4092 Query 153527 CACTTTAGTTATCGCCTTAAGTTTCTCGAAATCATA--GGTCATTTCGTCGACGCGTACG 153584 | || | | | || ||||| | |||||||| | | || | || | | || | Sbjct 4093 AAGCTTGGCAACTTCTTTGAGTTTGTGAAAATCATATTGTTTATCT-GTGGTCACGAA-- 4149 Query 153585 CATCGATTCACGGCAATAGACGCCAGATTACAGACGGCCGTCTCTTCGGCGTCGCTGTAC 153644 ||| ||||| ||||| || || ||||| || || || | ||||| || | || Sbjct 4150 CAT--ATTCAACGCAATTGAGGCTAGATTGCAAACTGCTATTTCTTCAGCTGATGTATAT 4207 Query 153645 TGCACGATCTCGGCGCAGAGGTTGCTGCATTTTATGACGCCCAAATTTTGCTGATTGCTT 153704 | || || || | || | ||| ||||||||||| ||| | ||| || ||||| ||| Sbjct 4208 TCGACTATTTCTGTACACAAGTTACTGCATTTTATAGTGCCAACATTCTGTTGATTACTT 4267 Query 153705 TTGCGATTGCACGCGTCTTTGAAGAGCATGTACGGTCCGCCGGTCTCGACTTG 153757 || ||||| || || |||||| | |||||||| || |||||||| ||||| Sbjct 4268 TTACGATTACAAGCATCTTTGTAAAGCATGTAAGGAGTCCCGGTCTCTACTTG 4320 >seq343 Length=430003 Score = 109 bits (120), Expect = 5e-19 Identities = 161/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || || || | |||||| || ||||||| | || || || || |||||||| || | Sbjct 48393 CCACCGCGGAGACGCAATACCAAATGTAATGTGGATTCTTTCTGTATGTTGTAATCAGAC 48452 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | || || ||| || | ||||| || | | |||| | |||||||||||| ||||| Sbjct 48453 AACGTGCGGCCGTCTTCCAACTGTTTTCCAGCAAAGATCAAACGCTGTTGGTCTGGAGGA 48512 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACC 138567 |||||||| ||||| ||||||| ||| | | ||| | || || | ||| || || Sbjct 48513 ATACCTTCCTTGTCTTGGATTTTTGCTTTAACGTTTTCGATAGTATCCGACGATTCTACT 48572 Query 138568 TCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCATG 138615 || | || | |||||||| |||| ||| || ||||| || |||||| Sbjct 48573 TCCAAAGTGATGGTTTTACCGGTCAAAGTCTTAACAAATATTTGCATG 48620 Score = 102 bits (112), Expect = 8e-17 Identities = 161/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || || |||| ||| | || ||||| | | |||||||||| ||||| || || ||| | Sbjct 57477 CCACCGCGCAGACGTAGGACCAAATGCAAGGTTGACTCCTTCTGAATATTATAATCGGAC 57536 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | || || ||| || ||||| || |||| | | || | ||| || ||||| ||||| Sbjct 57537 AAGGTGCGTCCGTCTTCCAGTTGCTTGCCGGCAAAAATCAAACGTTGCTGGTCTGGAGGA 57596 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAA-TTGTTCCACGGTGTCGGTCGACTCCAC 138566 |||||||||||||| ||| | || | ||||| | ||| | || || | || || || Sbjct 57597 ATACCTTCTTTGTC-TTGAATCTTGGCTTTAACATTTTCGATAGTATCTGACGGTTCAAC 57655 Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 || | || | ||||| ||||| | |||||||| || || ||||| Sbjct 57656 TTCCAAAGTGATAGTTTTGCCAGTTAATGTTTTTACGAAGATTTGCAT 57703 Score = 86.0 bits (94), Expect = 6e-12 Identities = 112/155 (72%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 138460 TCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTG 138519 || || | |||||| || | | |||| |||||||||||| ||||| |||||||| ||| Sbjct 48237 TCTTCCAATTGTTTGCCAGCGAAAATTAAACGCTGTTGGTCTGGAGGAATACCTTCCTTG 48296 Query 138520 TCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGC 138579 || ||||||| ||| | | ||| | || || | || || || || | || | Sbjct 48297 TCTTGGATTTTTGCTTTAACGTTTTCGATAGTATCCGACGGTTCTACTTCCAAAGTGATG 48356 Query 138580 GTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 ||||| ||||||| |||||| ||||| || ||||| Sbjct 48357 GTTTTTCCAGTCAAAGTTTTAACAAATATTTGCAT 48391 Score = 86.0 bits (94), Expect = 6e-12 Identities = 158/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 138387 GCCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCT 138446 ||| || |||||||| ||||| ||||| | | || || || |||||||||||||| Sbjct 48620 GCCACCACGCAAACGTAAAACCAAATGGAGTGTCGATTCTTTCTGAATGTTGTAGTCAGA 48679 Query 138447 CATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGG 138506 | || || | || | ||||| || | | |||| | ||| ||||| || || || Sbjct 48680 GAGTGTGCGGCCATTTTCCAACTGTTTGCCAGCAAAGATCAAACGTTGTTGATCTGGTGG 48739 Query 138507 TATACCTTCTTTGTCGGTGATTTTTTGTTTTAA-TTGTTCCACGGTGTCGGTCGACTCCA 138565 | ||| ||||| || ||| |||| ||||||| | || | || |||| | ||| | Sbjct 48740 GACACCCTCTTTATC-TTGAATTTTAGTTTTAACATTCTCAATAGTATCGGATGGCTCAA 48798 Query 138566 CCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 |||| | || | ||||| ||||||| || || || || |||||||| Sbjct 48799 CCTCCAAGGTGATAGTTTTTCCAGTCAATGTCTTCACGAATATCTGCAT 48847 >seq394 Length=301216 Score = 105 bits (116), Expect = 7e-18 Identities = 163/230 (71%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 138387 GCCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCT 138446 ||| || || | ||| || || ||||| | | || |||||||| || || ||||| Sbjct 217019 GCCTCCGCGAAGACGTAACACCAAATGGAGCGTAGATTCCTTTTGGATATTATAGTCTGA 217078 Query 138447 CATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGG 138506 || || || || || || || ||||||| | | |||| |||||||| || ||||| Sbjct 217079 CAAGGTGCGGCCATCTTCCAGCTGCTTACCGGCAAAAATTAAGCGCTGTTGATCTGGAGG 217138 Query 138507 TATACCTTCTTTGTCGGTGATTTTTTGTTTTAA-TTGTTCCACGGTGTCGGTCGACTCCA 138565 || ||||||||||| ||| |||||| ||||| | || | || || | | || | Sbjct 217139 AATGCCTTCTTTGTC-TTGAATTTTTGCTTTAACGTTCTCAATAGTATCCGAGGGTTCTA 217197 Query 138566 CCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCATG 138615 | || | || | |||||||| |||| |||||||||||| ||||||||| Sbjct 217198 CTTCTAAAGTGATGGTTTTACCTGTCAAAGTTTTTACAAAGATCTGCATG 217247 >seq110 Length=875010 Score = 93.3 bits (102), Expect = 4e-14 Identities = 159/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || || || | ||| | || || || | | | ||||||||||| ||||| || || Sbjct 86431 CCACCACGGAGACGAAGTACCAAGTGCAAGGTCGACTCCTTTTGTATGTTATAATCCGAT 86372 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | ||| ||| || || | ||||||||| | | || | ||| ||||| || ||||| Sbjct 86371 AAAGTCCGCCCATCTTCCAATTGTTTACCAGCGAAAATCAAACGTTGTTGATCTGGAGGA 86312 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTG-TTTTAATTGTTCCACGGTGTCGGTCGACTCCAC 138566 || |||||||| || ||| |||| | || | | ||| | ||||||| | ||| || Sbjct 86311 ATGCCTTCTTTATC-CTGAATTTTGGCCTTGACATTTTCAATAGTGTCGGAAGGCTCAAC 86253 Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 || | || | ||||| ||||| |||||||| |||||||| ||||| Sbjct 86252 TTCCAAAGTAATAGTTTTGCCAGTAAGAGTTTTAACAAAAATTTGCAT 86205 >seq180 Length=539930 Score = 84.2 bits (92), Expect = 2e-11 Identities = 157/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || |||||||||||||| || | ||||| | || || |||||||| || || ||| | Sbjct 121376 CCACCTCGCAAACGCAACACAAGATGTAATGTGGATTCTTTTTGAATATTATAATCGGAC 121435 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | || || || || | ||| || || | | || | || || ||||| || || Sbjct 121436 AATGTGCGACCATCTTCCAATTGCTTTCCAGCGAAAATCAATCGTTGCTGGTCGGGTGGA 121495 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTG-TTTTAATTGTTCCACGGTGTCGGTCGACTCCAC 138566 || || |||||||| ||| | || | ||||| | ||| | ||||| | | || || Sbjct 121496 ATTCCCTCTTTGTC-CTGAATCTTGGCTTTTACATTTTCGATAGTGTCCGAGGGTTCGAC 121554 Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 ||| | || | || || || || || |||||||||||||||||||| Sbjct 121555 CTCAAGAGTGATGGTCTTGCCCGTTAGGGTTTTTACAAAAATCTGCAT 121602 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496238045922720