Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glossina_20palpalis_20gambiensis_20[genbank_20GCA_5F000818775.1_2020 15-01-15] 3,926 sequences; 380,104,241 total letters Query= NC_012639.1 Length=141291 Score E Sequences producing significant alignments: (Bits) Value seq961 154 1e-32 seq362 154 1e-32 seq180 150 2e-31 seq110 149 6e-31 seq197 129 5e-25 seq394 123 2e-23 seq343 113 4e-20 >seq961 Length=34630 Score = 154 bits (170), Expect = 1e-32 Identities = 878/1384 (63%), Gaps = 43/1384 (3%) Strand=Plus/Minus Query 123313 TAGAACCGTGGCACGTTGATGTGTACGATTTTTTAAATTTAAAACGCAACATGGGGGCGG 123372 |||| || ||||| | ||| | | ||| ||| | ||||| ||| || | ||| | Sbjct 4607 TAGAGCCTTGGCATGCAGATATATTCGAATTTCTCAATTTGAAAAAGAATACGGGTAAAG 4548 Query 123373 AAGAAAAGAAAGCCCGCGATTTGTTGTACGCTTTATGGGTACCCGATTTGTTTATGCGAC 123432 ||||| | || || ||||| || || ||| | ||| |||| ||| | || ||| | Sbjct 4547 AAGAAGATCGTGCACGGGATTTATTTTATGCTCTGTGGATACCGGATCTTTTCATGAAAA 4488 Query 123433 GCGTAAAAGACGACG-GCGTGTGGTCGCTCATGTGTCCCGATCGGTGTCCCGGCTTGAGC 123491 | ||| | | || | || | ||||| || ||||||||| || || || |||||| | Sbjct 4487 GAGTAGAGGCTGATGAGCAT-TGGTCTCTAATGTGTCCCCATAAATGCCCTGGCTTGTGT 4429 Query 123492 GACGTTTACGGCAATCAGTTTGACGAGTTGTACGCGCAATACGAGCGCGAAGGCAAACAG 123551 || |||| || || | ||||| | || ||| ||||||| ||| |||||| | Sbjct 4428 GAAATTTATGGAGATAAATTTGATAAATTATACATAAAATACGAAGACGAGGGCAAAGCG 4369 Query 123552 GTTAGTCAGGTTCCGGCACGTGATTT---GTTCAAATTTATTATCGAAACACAAGTCGAA 123608 || | || |||||||| |||| | | | | | ||||| || Sbjct 4368 AATAAAACAATAAAAGCTCGTGATTTATGGTTCGCAATATGCAGTG---CTCAAGTAGAG 4312 Query 123609 ACCGGAACGCCGTACATGCTCTACAAAGACGCCTGCAACAGGAAAACCAATCAGAGCAAC 123668 ||||| || || |||||||| |||||||| || || || | |||| ||||| || Sbjct 4311 ACCGGGACTCCTTACATGCTTTACAAAGATGCTTGTAATCGTAAAAGTAATCAACAGAAT 4252 Query 123669 TTGGGAACAATAAAATGTAGTAATCTTTGCTCCGAAATTATCGAATACAGCGATGCCGAT 123728 | || || |||||||| ||||| | || | ||||| ||||||| | || || Sbjct 4251 GTTGGCACTATAAAATGCAGTAACTTGTGTACAGAAATAGTCGAATATACATCAGCTGAA 4192 Query 123729 CAAGTGGCCGTGTGTAATTTGGCTTCGATTTGCGT-GAATCGTTGCGTCGAAAACGG--- 123784 || | || || || ||| | || || ||| |||| |||| | ||| || || | Sbjct 4191 GAAATAGCAGTTTGCAATCTAGCCTCAATT-GCGTTGAATATGTTCGT-GACCACAGATA 4134 Query 123785 --CGCTTTTAATTTC-CAAACGCTCAAACGCATAACAAAAACTGTAGTAAAGAATTTGAA 123841 | | | | |||| ||||| ||||| | | || | || || || | || Sbjct 4133 AACAATATGATTTTCACAAAC--TCAAAGAAGTTGCCAAGCTTATAACAAGAAACCTCAA 4076 Query 123842 CAAAATTATCGATGTTAATTTTTATCCTTTGGAGGAAGCGCGTTTGTCTAATTTGAAACA 123901 ||| || |||||||| |||| ||||| || |||| | | ||||||||| || Sbjct 4075 CAAGATAATCGATGTCAATTACTATCCGCTGTCGGAAACCAGAAAGTCTAATTTTCGTCA 4016 Query 123902 CAGACCGGTCGGAGTGGGCATTCAAGGGTTGGCCGACGCGTTTGTAATGCTGCGCATGCC 123961 | || | || | || | ||||| || || ||||| | | | |||| || Sbjct 4015 TCGTCCAATTGGTTTAGGTGTCCAAGGATTTGCTGACGCACTAATTTTAATGCGTTATCC 3956 Query 123962 GTACGAAAGCGACGAAGCAAAGTT-GCTTAA-TACGCAAATAGCCGAAACAATTTATTAC 124019 || |||||||| ||| | |||||| || ||||| |||||||| ||||| Sbjct 3955 CTATGAAAGCGA--AAGTGCTGCACGCTTAAATAAACAAATTTTTGAAACAATATATTAT 3898 Query 124020 GGCGCTTTGGAGGCGAGCTGCGAACTTGCGAAAATTCACGGCGCGTACGAAAGTTACGCG 124079 || || || || || || || ||| | || ||| |||| ||||||||| || | Sbjct 3897 GGTGCCTTAGAAGCTAGTTGTGAATTGGCCAAACAGTACGGTCCGTACGAAACCTATGAA 3838 Query 124080 GGCAGCCCGGCGAGCCGAGGTATTTTGCAGTACGACATGTGGAATGCTACACCGACAAAT 124139 || || || | || |||||| | || || || |||||| || || || || || Sbjct 3837 GGTAGTCCAGTTAGTAAAGGTATCCTTCAATATGATATGTGGGATAAAACGCCTACTGAT 3778 Query 124140 TTGTGGGACTGGAGCGTTTTAAAACAACGCATATCGACGCACGGTTTGCGTAACTCGCTG 124199 | ||| | ||| | | | ||| | ||| | | || |||| || || || Sbjct 3777 CTATGGAATTGGTCGGCTCTTAAAGACGACATTAAAAGTTATGGAGTGCGCAATTCTTTG 3718 Query 124200 TTGGTGGCGTACATGCCGACGGCAACCACTGCTCAAATTTTAGGAAACAACGAATCCTTC 124259 |||| || ||||| ||||| | |||||||||||| | || |||||||| || || Sbjct 3717 CTGGTAGCTCCAATGCCTACGGCGTCTACTGCTCAAATTCTTGGTAACAACGAGTCTTTT 3658 Query 124260 GAGCCGTTCACTAACAATTTGTACGTGCGACGAGTGTTAGCCGGCGATTTTCAAGTGATA 124319 ||||| | |||| || | ||| ||||| || | | || || ||| ||| | Sbjct 3657 GAGCCATACACTTCAAACGTTTACACACGACGCGTACTGTCTGGTGAGTTTATCGTGGTC 3598 Query 124320 AATCATCATTTGGTGGACGACTTGGTGGCGTT--AAATTTGTACGATGAAAACATGCGCA 124377 |||||||||||| | | || ||| | || |||| | |||| |||||| | Sbjct 3597 AATCATCATTTGCTTAAAGATTTGACTGAATTGGGCCTTTGGA--ATGATAACATGAAAA 3540 Query 124378 ACGAAATTATTGCGGCCGGTGGCAGC---GTGCAGCGCATCGCTTCGATTCCGGAACACG 124434 || || |||| ||| | || || | || ||||| | || || || | Sbjct 3539 ACTTAA-TATT--GGCACATCGCGGCTCAATACAAAACATCGAAGCCATACCTGACAGCA 3483 Query 124435 TCAAGCAACTGTACAAAACCGTGTGGGAAAT----GAAAAATAAACGATTAATTGAAATG 124490 | || || | || ||||| || |||||||| | ||||| ||| |||| | ||| Sbjct 3482 TAAAAGAATTATATAAAACGGTTTGGGAAATTTCGGTAAAATCAACCATTA----ACATG 3427 Query 124491 GCCGTCGACCGAGGCGCGTACACGGATCAAAGTCAATCTTTTAACGTGTTTGTAGCGGAA 124550 || || || || ||||| | || || ||||||||||| |||||| | ||||| ||| Sbjct 3426 GCTGTTGATCGCGGCGCTTTCATCGACCAAAGTCAATCGTTTAACATACACGTAGCTGAA 3367 Query 124551 CCCACCTACGCCCGCATGACCAGC-ATACACATGCACGCGTGGAGCAGCGGACTCAAAAC 124609 || | || | || | | | ||||| | | | |||| ||| | ||||| Sbjct 3366 CCTAGTTATG-GTAAATTATCTTCTATACATTTTTATGGATGGAAGGCCGGTTTGAAAAC 3308 Query 124610 GGGCATGTATTACTTAAGAACCAAACCGGCGGCCGATGCCATTCAATTTACCGTCGACAA 124669 || ||||||||| ||||||| || || || || || |||| |||||||| ||||| || Sbjct 3307 CGGTATGTATTACCTAAGAACAAAGCCAGCAGCAAATCCCATACAATTTACAGTCGATAA 3248 Query 124670 ATCT 124673 | || Sbjct 3247 AACT 3244 >seq362 Length=381446 Score = 154 bits (170), Expect = 1e-32 Identities = 878/1384 (63%), Gaps = 43/1384 (3%) Strand=Plus/Plus Query 123313 TAGAACCGTGGCACGTTGATGTGTACGATTTTTTAAATTTAAAACGCAACATGGGGGCGG 123372 |||| || ||||| | ||| | | ||| ||| | ||||| ||| || | ||| | Sbjct 8127 TAGAGCCTTGGCATGCAGATATATTCGAATTTCTCAATTTGAAAAAGAATACGGGTAAAG 8186 Query 123373 AAGAAAAGAAAGCCCGCGATTTGTTGTACGCTTTATGGGTACCCGATTTGTTTATGCGAC 123432 ||||| | || || ||||| || || ||| | ||| |||| ||| | || ||| | Sbjct 8187 AAGAAGATCGTGCACGGGATTTATTTTATGCTCTGTGGATACCGGATCTTTTCATGAAAA 8246 Query 123433 GCGTAAAAGACGACG-GCGTGTGGTCGCTCATGTGTCCCGATCGGTGTCCCGGCTTGAGC 123491 | ||| | | || | || | ||||| || ||||||||| || || || |||||| | Sbjct 8247 GAGTAGAGGCTGATGAGCAT-TGGTCTCTAATGTGTCCCCATAAATGCCCTGGCTTGTGT 8305 Query 123492 GACGTTTACGGCAATCAGTTTGACGAGTTGTACGCGCAATACGAGCGCGAAGGCAAACAG 123551 || |||| || || | ||||| | || ||| ||||||| ||| |||||| | Sbjct 8306 GAAATTTATGGAGATAAATTTGATAAATTATACATAAAATACGAAGACGAGGGCAAAGCG 8365 Query 123552 GTTAGTCAGGTTCCGGCACGTGATTT---GTTCAAATTTATTATCGAAACACAAGTCGAA 123608 || | || |||||||| |||| | | | | | ||||| || Sbjct 8366 AATAAAACAATAAAAGCTCGTGATTTATGGTTCGCAATATGCAGTG---CTCAAGTAGAG 8422 Query 123609 ACCGGAACGCCGTACATGCTCTACAAAGACGCCTGCAACAGGAAAACCAATCAGAGCAAC 123668 ||||| || || |||||||| |||||||| || || || | |||| ||||| || Sbjct 8423 ACCGGGACTCCTTACATGCTTTACAAAGATGCTTGTAATCGTAAAAGTAATCAACAGAAT 8482 Query 123669 TTGGGAACAATAAAATGTAGTAATCTTTGCTCCGAAATTATCGAATACAGCGATGCCGAT 123728 | || || |||||||| ||||| | || | ||||| ||||||| | || || Sbjct 8483 GTTGGCACTATAAAATGCAGTAACTTGTGTACAGAAATCGTCGAATATACATCAGCTGAA 8542 Query 123729 CAAGTGGCCGTGTGTAATTTGGCTTCGATTTGCGT-GAATCGTTGCGTCGAAAACGG--- 123784 || | || || || ||| | || || ||| |||| |||| | ||| || || | Sbjct 8543 GAAATAGCAGTTTGCAATCTAGCCTCAATT-GCGTTGAATATGTTCGT-GACCACAGATA 8600 Query 123785 --CGCTTTTAATTTC-CAAACGCTCAAACGCATAACAAAAACTGTAGTAAAGAATTTGAA 123841 | | | | |||| ||||| ||||| | | || | || || || | || Sbjct 8601 AACAATATGATTTTCACAAAC--TCAAAGAAGTTGCCAAGCTTATAACAAGAAACCTCAA 8658 Query 123842 CAAAATTATCGATGTTAATTTTTATCCTTTGGAGGAAGCGCGTTTGTCTAATTTGAAACA 123901 ||| || |||||||| |||| ||||| || |||| | | ||||||||| || Sbjct 8659 CAAGATAATCGATGTCAATTACTATCCGCTGTCGGAAACCAGAAAGTCTAATTTTCGTCA 8718 Query 123902 CAGACCGGTCGGAGTGGGCATTCAAGGGTTGGCCGACGCGTTTGTAATGCTGCGCATGCC 123961 | || | || | || | ||||| || || ||||| | | | |||| || Sbjct 8719 TCGTCCAATTGGTTTAGGTGTCCAAGGATTTGCTGACGCACTAATTTTAATGCGTTATCC 8778 Query 123962 GTACGAAAGCGACGAAGCAAAGTT-GCTTAA-TACGCAAATAGCCGAAACAATTTATTAC 124019 || |||||||| ||| | |||||| || ||||| |||||||| ||||| Sbjct 8779 CTATGAAAGCGA--AAGTGCTGCACGCTTAAATAAACAAATTTTTGAAACAATATATTAT 8836 Query 124020 GGCGCTTTGGAGGCGAGCTGCGAACTTGCGAAAATTCACGGCGCGTACGAAAGTTACGCG 124079 || || || || || || || ||| | || ||| |||| ||||||||| || | Sbjct 8837 GGTGCCTTAGAAGCTAGTTGTGAATTGGCCAAACAGTACGGTCCGTACGAAACCTATGAA 8896 Query 124080 GGCAGCCCGGCGAGCCGAGGTATTTTGCAGTACGACATGTGGAATGCTACACCGACAAAT 124139 || || || | || |||||| | || || || |||||| || || || || || Sbjct 8897 GGTAGTCCAGTTAGTAAAGGTATCCTTCAATATGATATGTGGGATAAAACGCCTACTGAT 8956 Query 124140 TTGTGGGACTGGAGCGTTTTAAAACAACGCATATCGACGCACGGTTTGCGTAACTCGCTG 124199 | ||| | ||| | | | ||| | ||| | | || |||| || || || Sbjct 8957 CTATGGAATTGGTCGGCTCTTAAAGACGACATTAAAAGTTATGGAGTGCGCAATTCTTTG 9016 Query 124200 TTGGTGGCGTACATGCCGACGGCAACCACTGCTCAAATTTTAGGAAACAACGAATCCTTC 124259 |||| || ||||| ||||| | |||||||||||| | || |||||||| || || Sbjct 9017 CTGGTAGCTCCAATGCCTACGGCGTCTACTGCTCAAATTCTTGGTAACAACGAGTCTTTT 9076 Query 124260 GAGCCGTTCACTAACAATTTGTACGTGCGACGAGTGTTAGCCGGCGATTTTCAAGTGATA 124319 ||||| | |||| || | ||| ||||| || | | || || ||| ||| | Sbjct 9077 GAGCCATACACTTCAAACGTTTACACACGACGCGTACTGTCTGGTGAGTTTATCGTGGTC 9136 Query 124320 AATCATCATTTGGTGGACGACTTGGTGGCGTT--AAATTTGTACGATGAAAACATGCGCA 124377 |||||||||||| | | || ||| | || |||| | |||| |||||| | Sbjct 9137 AATCATCATTTGCTTAAAGATTTGACTGAATTGGGCCTTTGGA--ATGATAACATGAAAA 9194 Query 124378 ACGAAATTATTGCGGCCGGTGGCAGC---GTGCAGCGCATCGCTTCGATTCCGGAACACG 124434 || || |||| ||| | || || | || ||||| | || || || | Sbjct 9195 ACTTAA-TATT--GGCACATCGCGGCTCAATACAAAACATCGAAGCCATACCTGACAGCA 9251 Query 124435 TCAAGCAACTGTACAAAACCGTGTGGGAAAT----GAAAAATAAACGATTAATTGAAATG 124490 | || || | || ||||| || |||||||| | ||||| ||| |||| | ||| Sbjct 9252 TAAAAGAATTATATAAAACGGTTTGGGAAATTTCGGTAAAATCAACCATTA----ACATG 9307 Query 124491 GCCGTCGACCGAGGCGCGTACACGGATCAAAGTCAATCTTTTAACGTGTTTGTAGCGGAA 124550 || || || || ||||| | || || ||||||||||| |||||| | ||||| ||| Sbjct 9308 GCTGTTGATCGCGGCGCTTTCATCGACCAAAGTCAATCGTTTAACATACACGTAGCTGAA 9367 Query 124551 CCCACCTACGCCCGCATGACCAGC-ATACACATGCACGCGTGGAGCAGCGGACTCAAAAC 124609 || | || | || | | | ||||| | | | |||| ||| | ||||| Sbjct 9368 CCTAGTTATG-GTAAATTATCTTCTATACATTTTTATGGATGGAAGGCCGGTTTGAAAAC 9426 Query 124610 GGGCATGTATTACTTAAGAACCAAACCGGCGGCCGATGCCATTCAATTTACCGTCGACAA 124669 || ||||||||| ||||||| || || || || || |||| |||||||| ||||| || Sbjct 9427 CGGTATGTATTACCTAAGAACAAAGCCAGCAGCAAATCCCATACAATTTACAGTCGATAA 9486 Query 124670 ATCT 124673 | || Sbjct 9487 AACT 9490 >seq180 Length=539930 Score = 150 bits (166), Expect = 2e-31 Identities = 178/239 (74%), Gaps = 4/239 (2%) Strand=Plus/Plus Query 45104 TTATTTTATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATT 45163 || |||| ||| || || | | |||||| ||||| | || ||||| ||||| ||||| Sbjct 121366 TTTTTTTGCTCCACCTCGCAAACGCAACACAAGATGTAATGTGGATTCTTTTTGAATATT 121425 Query 45164 ATAATCGCTGACGGTTTTAGA--ATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGC 45221 ||||||| ||| | | || ||| |||||||| ||||| ||| | |||||||||||| Sbjct 121426 ATAATCG--GACAATGTGCGACCATCTTCCAATTGCTTTCCAGCGAAAATCAATCGTTGC 121483 Query 45222 TGGTCCGGCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCG 45281 ||||| || ||||| || ||||| || ||||| || ||| | ||| | ||||| Sbjct 121484 TGGTCGGGTGGAATTCCCTCTTTGTCCTGAATCTTGGCTTTTACATTTTCGATAGTGTCC 121543 Query 45282 GAAGACTCGACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 || | ||||| || ||||| | || ||||| ||||| |||||||||||||| ||||| Sbjct 121544 GAGGGTTCGACCTCAAGAGTGATGGTCTTGCCCGTTAGGGTTTTTACAAAAATCTGCAT 121602 >seq110 Length=875010 Score = 149 bits (164), Expect = 6e-31 Identities = 172/232 (74%), Gaps = 0/232 (0%) Strand=Plus/Minus Query 45109 TTATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAAT 45168 |||| || || ||||| | | || | |||| || || |||||||| || ||||||| Sbjct 86436 TTATACCACCACGGAGACGAAGTACCAAGTGCAAGGTCGACTCCTTTTGTATGTTATAAT 86377 Query 45169 CGCTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCG 45228 | | || ||| ||||||||||| || ||| | ||||| ||||| || || | Sbjct 86376 CCGATAAAGTCCGCCCATCTTCCAATTGTTTACCAGCGAAAATCAAACGTTGTTGATCTG 86317 Query 45229 GCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACT 45288 | ||||||||||||||||| |||||||| |||| ||| | |||||||||| || Sbjct 86316 GAGGAATGCCTTCTTTATCCTGAATTTTGGCCTTGACATTTTCAATAGTGTCGGAAGGCT 86257 Query 45289 CGACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 | ||||| | ||||| |||||||| || |||||||| |||||||||||||| Sbjct 86256 CAACTTCCAAAGTAATAGTTTTGCCAGTAAGAGTTTTAACAAAAATTTGCAT 86205 >seq197 Length=390979 Score = 129 bits (142), Expect = 5e-25 Identities = 475/740 (64%), Gaps = 13/740 (2%) Strand=Plus/Plus Query 123600 CAAGTCGAAACCGGAACGCCGTACATGCTCTACAAAGACGCCTGCAACAGGAAAACCAAT 123659 ||| | || |||||||| || |||||||| |||||||| || || || | |||| ||| Sbjct 298189 CAACTAGAGACCGGAACTCCTTACATGCTTTACAAAGATGCTTGTAATCGCAAAAGTAAT 298248 Query 123660 CAGAGCAACTTGGGAACAATAAAATGTAGTAATCTTTGCTCCGAAATTATCGAATACAGC 123719 || || | || ||||||||||| ||||| | || | |||||| ||||||| | Sbjct 298249 CAACAGAATGTTGGCACAATAAAATGCAGTAACTTGTGTACAGAAATTGTCGAATATACG 298308 Query 123720 GATGCCGATCAAGTGGCCGTGTGTAATTTGGCTTCGATTTGCGTGAATCGTTGCGT--CG 123777 || || || | || || || ||| |||| || ||| |||||| | ||| || Sbjct 298309 TCGGCTGAGGAAATAGCAGTTTGCAATCTGGCCTCAATTGCGGTGAATATGTTCGTGACG 298368 Query 123778 A-----AAACGGCGCTTTTAATTTCCAAACGCTCAAACGCATAACAAAAACTGTAGTAAA 123832 | |||| | | ||||||| | || ||| | |||| | || || Sbjct 298369 ACAGATAAACAA----TATGATTTCCAGAAACTGAAAGAAGTTGCAAAGCTTATAACAAG 298424 Query 123833 GAATTTGAACAAAATTATCGATGTTAATTTTTATCCTTTGGAGGAAGCGCGTTTGTCTAA 123892 ||| | ||||| || ||||| || |||| |||||| || |||||| ||||| Sbjct 298425 AAATCTTAACAAGATAATCGACGTCAATTATTATCCGCTGCCGGAAGCCAAAAAATCTAA 298484 Query 123893 TTTGAAACACAGACCGGTCGGAGTGGGCATTCAAGGGTTGGCCGACGCGTTTGTAATGCT 123952 ||| || | || |||| | || | ||||| || || ||||| | | | | Sbjct 298485 TTTACGTCATCGTCCAATCGGTATAGGTGTCCAAGGATTTGCTGACGCACTAATTTTAAT 298544 Query 123953 GCGCATGCCGTACGAAAGCGACGAAGCAAAGTTGCTTAA-TACGCAAATAGCCGAAACAA 124011 ||| || || |||||||| | || | |||||| || ||||| ||||| | Sbjct 298545 GCGTTACCCCTATGAAAGCGAGAATGCTGC-TCGCTTAAATAAACAAATTTTTGAAACCA 298603 Query 124012 TTTATTACGGCGCTTTGGAGGCGAGCTGCGAACTTGCGAAAATTCACGGCGCGTACGAAA 124071 | ||||| || ||||| ||||| || || || | || ||| |||| | ||||||| Sbjct 298604 TATATTATGGTGCTTTAGAGGCTAGTTGTGAGTTGGCCAAACAATACGGTCCTTACGAAA 298663 Query 124072 GTTACGCGGGCAGCCCGGCGAGCCGAGGTATTTTGCAGTACGACATGTGGAATGCTACAC 124131 || | || || || | || ||| ||| | || || || |||||| || || | Sbjct 298664 CATATGAAGGTAGTCCAGTTAGTAAAGGCATTCTTCAATATGATATGTGGGATAAAACGC 298723 Query 124132 CGACAAATTTGTGGGACTGGAGCGTTTTAAAACAACGCATATCGACGCACGGTTTGCGTA 124191 | || || | ||| | ||| | | | ||| | ||| || | || |||| | Sbjct 298724 CTACTGATCTATGGAATTGGTCGGCTCTTAAAGACGACATTAAGAGTTATGGAGTGCGCA 298783 Query 124192 ACTCGCTGTTGGTGGCGTACATGCCGACGGCAACCACTGCTCAAATTTTAGGAAACAACG 124251 | || || |||| || ||||| || || |||||||||||||| | || || |||| Sbjct 298784 ATTCCTTGCTGGTAGCACCAATGCCTACCGCGTCCACTGCTCAAATTCTTGGTAATAACG 298843 Query 124252 AATCCTTCGAGCCGTTCACTAACAATTTGTACGTGCGACGAGTGTTAGCCGGCGATTTTC 124311 | || || ||||||| ||| || | ||| ||||| || || |||| || ||| Sbjct 298844 AGTCTTTTGAGCCGTACACGTCAAACGTTTACACACGACGTGTATTGTCCGGTGAATTTA 298903 Query 124312 AAGTGATAAATCATCATTTG 124331 || | |||||||||||| Sbjct 298904 TTGTCGTCAATCATCATTTG 298923 >seq394 Length=301216 Score = 123 bits (136), Expect = 2e-23 Identities = 168/230 (73%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 45114 CCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTG 45173 |||||||| || | ||||| | ||| ||||| |||||||||||||||||||| || || Sbjct 217020 CCTCCGCGAAGACGTAACACCAAATGGAGCGTAGATTCCTTTTGGATATTATAGTC--TG 217077 Query 45174 AC--GGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCG 45231 || ||| ||| |||| || || || || | || || || || || || || | Sbjct 217078 ACAAGGTGCGGCCATCTTCCAGCTGCTTACCGGCAAAAATTAAGCGCTGTTGATCTGGAG 217137 Query 45232 GAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCG 45290 ||||||||||||| ||||||| |||||| || | || | || | || || || | || Sbjct 217138 GAATGCCTTCTTTGTCTTGAA-TTTTTGCTTTAACGTTCTCAATAGTATCCGAGGGTTCT 217196 Query 45291 ACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 ||||| | ||| | ||||| || || | |||||||||||| || ||||| Sbjct 217197 ACTTCTAAAGTGATGGTTTTACCTGTCAAAGTTTTTACAAAGATCTGCAT 217246 Score = 84.2 bits (92), Expect = 2e-11 Identities = 144/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 45132 ACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCC 45191 |||| ||||| ||||| || || || || |||||||| | || ||| ||| Sbjct 217266 ACTAAATGCAAAGTTGACTCTTTCTGTATGTTATAATCCGAAAGAGTACGGCCATCCTCC 217325 Query 45192 AATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGA 45251 ||||| ||||| || | || || || ||||| || ||||| || ||||| ||||||||| Sbjct 217326 AATTGCTTTCCAGCAAAAATTAAACGCTGCTGATCTGGCGGGATTCCTTCCTTATCTTGA 217385 Query 45252 ATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTG 45311 ||||| |||| || | ||||| || | ||| || || | ||| | |||||| Sbjct 217386 ATTTTAGCCTTGACATTCTCAATAGTGTCAGACGGCTCAACCTCTAAAGTGATAGTTTTG 217445 Query 45312 CCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 || || | || || || || || ||||| Sbjct 217446 CCAGTCAATGTCTTCACGAAGATCTGCAT 217474 >seq343 Length=430003 Score = 113 bits (124), Expect = 4e-20 Identities = 163/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 || || ||||| || | | || | ||||| ||||| ||||| || |||||||||||| Sbjct 57474 ATACCACCGCGCAGACGTAGGACCAAATGCAAGGTTGACTCCTTCTGAATATTATAATCG 57533 Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230 | ||| || |||| ||| || || || | ||||| ||||||||||| || Sbjct 57534 GACAAGGTGCGTCCGTCTTCCAGTTGCTTGCCGGCAAAAATCAAACGTTGCTGGTCTGGA 57593 Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCG 45290 ||||| |||||||| |||||||| || ||| | ||| | || || || | || Sbjct 57594 GGAATACCTTCTTTGTCTTGAATCTTGGCTTTAACATTTTCGATAGTATCTGACGGTTCA 57653 Query 45291 ACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 ||||| | ||| | |||||||| |||| |||||||| || |||||||| Sbjct 57654 ACTTCCAAAGTGATAGTTTTGCCAGTTAATGTTTTTACGAAGATTTGCAT 57703 Score = 93.3 bits (102), Expect = 4e-14 Identities = 114/156 (73%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 45185 ATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTT 45244 ||| ||||||||||| || ||| | || || || || ||||| || ||||| ||||| || Sbjct 48236 ATCTTCCAATTGTTTGCCAGCGAAAATTAAACGCTGTTGGTCTGGAGGAATACCTTCCTT 48295 Query 45245 ATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAAC 45304 ||||| |||||| ||| | ||| | || || || | || ||||| | ||| | Sbjct 48296 GTCTTGGATTTTTGCTTTAACGTTTTCGATAGTATCCGACGGTTCTACTTCCAAAGTGAT 48355 Query 45305 CGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 ||||| || || | |||||| ||||| |||||||| Sbjct 48356 GGTTTTTCCAGTCAAAGTTTTAACAAATATTTGCAT 48391 Score = 84.2 bits (92), Expect = 2e-11 Identities = 114/159 (72%), Gaps = 0/159 (0%) Strand=Plus/Plus Query 45137 ATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCCAATTG 45196 ||||| ||||| ||||| || ||||| |||||| | ||| || |||| ||| Sbjct 54265 ATGCAAGGTTGACTCCTTCTGAATATTGTAATCGGACAAGGTGCGTCCGTCCTCCAGTTG 54324 Query 45197 TTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATTTT 45256 ||| || || | ||||| ||||| || || || || || ||||| |||||||||||||| Sbjct 54325 TTTGCCGGCAAAAATCAAACGTTGTTGATCTGGGGGGATTCCTTCCTTATCTTGAATTTT 54384 Query 45257 TTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTC 45295 |||| || | |||||||||| ||||||||| Sbjct 54385 AGCCTTGACATTCTCAATTGTGTCGGAAGGCTCGACTTC 54423 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 451981017942960