Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glossina_20palpalis_20gambiensis_20[genbank_20GCA_5F000818775.1_2020 15-01-15] 3,926 sequences; 380,104,241 total letters Query= NC_015960.1 Length=175699 Score E Sequences producing significant alignments: (Bits) Value seq197 437 1e-117 seq961 396 3e-105 seq362 392 4e-104 seq158 313 3e-80 >seq197 Length=390979 Score = 437 bits (484), Expect = 1e-117 Identities = 1461/2275 (64%), Gaps = 67/2275 (3%) Strand=Plus/Minus Query 46973 TTTTTCCACAGTAAACTTAATTGGATTACTCGCTGATTTTGTTCGTAAATAATACATACC 47032 ||| || || ||||| | | ||||| |||| |||||| || |||||||||||| Sbjct 299262 TTTATCGACTGTAAAATGTGTGGGATTCGCTGCTGGCTTTGTTTTTAGATAATACATACC 299203 Query 47033 AGTCTTTAAACCTAAACTCCATCCATAGAAATGCATACTAGTTAATTTAGAATAACTAGG 47092 ||||||||||| |||||||||| ||||| ||| || |||||| ||||||||| Sbjct 299202 GGTCTTTAAACCGGCTTTCCATCCATAAAAATGTATAGAAGACAATTTACCATAACTAGG 299143 Query 47093 TTCTGAAATATGAATATTAAGAGATTGACTCTGATCAATAAATGCACCTCTATCAGCTGC 47152 ||| | | || ||||| | ||||| || || || || || ||||| | ||| || || Sbjct 299142 TTCAGCTACGTGTATATTGAATGATTGGCTTTGGTCGATGAAAGCACCGCGATCGGCAGC 299083 Query 47153 CATATCTAAAA--TAACCCTTTGT--GGTATCTCCCATACTGTTTTATAAATTTGTTTAA 47208 ||| | ||| | | ||| | || ||||| || |||||||| | || ||| | Sbjct 299082 CATGT-TAATGGTTGA---TTTCACCGAAATTTCCCAAACCGTTTTATACAATTCTTTTA 299027 Query 47209 TGTCTTCTGGGAGA---TTAGTATTTTGAATAGATCCTCCgttttctataattttgtttt 47265 | || || | | | | ||||| || || || | | | | | ||| ||||| Sbjct 299026 TACTATCAGGTATGGCCTCAATGTTTTGTATTGAGCCGCGATGTGCCAATATTAAGTTTT 298967 Query 47266 ttaattcatttgaccaaagttttcgttcagttaatgtttttaaAAGATGAGGATTAACAA 47325 | | |||| |||||| |||||| || ||| | | |||| |||| || | Sbjct 298966 TCATGTCATCATTCCAAAGGCGCAATTCAGTCAAATCTTTGAGCAAATGATGATTGACGA 298907 Query 47326 TTTGAAATTCTCCAGATAGTACTCTACGGCTATATATATTACTTGTATATGGTTCTATAG 47385 |||||| || || | ||| | || | || | || || || || || | || Sbjct 298906 CAATAAATTCACCGGACAATACACGTCGTGTGTAAACGTTTGACGTGTACGGCTCAAAAG 298847 Query 47386 ATTCATTATTTCCAAAAATTTGAGCAGTTGATGCTGTAGGCATGGATGCAACTAATAAGC 47445 | || ||||| |||| |||||||||||| || || |||||||| | ||| || | ||| Sbjct 298846 ACTCGTTATTACCAAGAATTTGAGCAGTGGACGCGGTAGGCATTGGTGCTACCAGCAAGG 298787 Query 47446 TATTTCTTACTCCATATTTTTGTATCTNNNNNNNNNNNNGTTTCCAATCCCAAAGATCTG 47505 ||| | |||||||| | | || | ||||| ||| ||||| | Sbjct 298786 AATTGCGCACTCCATAACTCTTAATGTCGTCTTTAAGAGCCGACCAATTCCATAGATCAG 298727 Query 47506 ATGGAACAACATTCCAAAAATCATATTGAAGAATTCCTTTACTTATCGGAGAACCATTAT 47565 || || ||| | ||||||||||||||| |||||||| | ||| ||| | || Sbjct 298726 TAGGCGTTTTATCCCACATATCATATTGAAGAATGCCTTTACTAACTGGACTACCTTCAT 298667 Query 47566 ATGTTTTATAAGGACCGTATAGTTTAGCGAGTTCACAACTTGCTTCCAATGCACTATAAT 47625 |||||| |||||||||||| |||| || | |||||||| || || || |||| ||||| Sbjct 298666 ATGTTTCGTAAGGACCGTATTGTTTGGCCAACTCACAACTAGCCTCTAAAGCACCATAAT 298607 Query 47626 ATATTGTTTCAAATATTTTTATGTTTAGATTCCTTGC-TTCT-GATGATTCAAAAGGATA 47683 |||| |||||||| |||| | | |||| || |||| | | |||| | || || Sbjct 298606 ATATGGTTTCAAAAATTTGTTTATTTAAGCGAGCAGCATTCTCGCT--TTCATAGGGGTA 298549 Query 47684 NNNNNNNNNNNNNAATGTATCTGCCAATCCTTGAACACCAATACCAATTGGTCTATGAGT 47743 | || || || |||||||| ||||| ||||| ||||| | |||| Sbjct 298548 ACGCATTAAAATTAGTGCGTCAGCAAATCCTTGGACACCTATACCGATTGGACGATGACG 298489 Query 47744 TTTATTAGAAAACTCAGCTTCTGGTAATGGATATTTGTTTATATCTATAATTTTATTTAG 47803 | |||||| | ||||| || | ||||| | || | || || || || || || Sbjct 298488 TAAATTAGATTTTTTGGCTTCCGGCAGCGGATAATAATTGACGTCGATTATCTTGTTAAG 298429 Query 47804 ANNNNNNNNNNNNNNNNNNACAATTTCTCTTAATTTATTAAAATCAAACTTGTTATTTAT 47863 | ||| |||| | | ||| | |||||| | | |||| | | Sbjct 298428 ATTTCTTGTTATAAGCTTTGCAACTTCTTTCAGTTTCTGGAAATCATATTGTTTATCTGT 298369 Query 47864 A---ACAAACCTATTAAGTGCTATAGATGCTAGATTACATACAGCTACCTCATTTGGATT 47920 || ||| |||| | || || || || ||||| || || |||| || | | Sbjct 298368 CGTCACGAACATATTCACCGCAATTGAGGCCAGATTGCAAACTGCTATTTCCTCAGCCGA 298309 Query 47921 AGTATATTGTATTATTTCAGCACATAGATTACCACATTTGATAGTACCCAAATTTTGATG 47980 ||||||| | ||||| | ||| | |||| ||||| || || || | ||| || || Sbjct 298308 CGTATATTCGACAATTTCTGTACACAAGTTACTGCATTTTATTGTGCCAACATTCTGTTG 298249 Query 47981 ATTATTNNNNTTGTTACATGCGTCCTTGTAAAGCATAAAAGGTGTTCCAGTTTCTATCTG 48040 |||| | ||||| || || ||||||||||| |||| ||||| || |||| || Sbjct 298248 ATTACTTTTGCGATTACAAGCATCTTTGTAAAGCATGTAAGGAGTTCCGGTCTCTAGTTG 298189 Query 48041 AGATTCAATGATAGATTTCCAAACAGTCCT----AGCCTTTATAACAGCTCTA---GCTT 48093 | || || | ||| | || || || ||| ||||| | | || |||| Sbjct 298188 GG---CACTGC-ATATTGCGAACCACAACTCACGAGCTTTTATT---GTTTTATTCGCTT 298136 Query 48094 TATTATCATGTTCGTATTTAGTATATAACTTCTCAAATTCATCCCCATACACATTATCTA 48153 || || | ||| ||||| | || || || ||||||| || ||||| |||| || | Sbjct 298135 TACCCTCGTCTTCATATTTTATGTACAATTTATCAAATTTGTCTCCATATACATCTTCCA 298076 Query 48154 ACCCAGGACATTCATTAGGACACATCAATGACCAATCCTCATCATTTTTTACTCTAGTCA 48213 | ||||| |||| || || ||||| || ||||||| ||||||| || ||||| ||| Sbjct 298075 AGCCAGGGCATTTATGGGGGCACATTAAAGACCAATGCTCATCAGCTTCCACTCTTTTCA 298016 Query 48214 TAAATATATCTGGTATCCAAAGAGCTATAAATAAATCCCTAGTTCTTAGTTCTTCATTGC 48273 | |||| |||||||||||| ||||| | ||||||||||| | | ||| || |||| Sbjct 298015 TGAATAAATCTGGTATCCACAGAGCAAAAAATAAATCCCGTGCACGATCTTCCTCTTTGC 297956 Query 48274 CACTATTCCTTTTAAGTTCAAGAAAGTCCATTATATCAGCATGCCATGGTTCTAAATATA 48333 | ||||| |||| | |||||||| || | ||||| || ||||| |||||||| || | Sbjct 297955 CCGTATTCTTTTTCAAGTCAAGAAATTCGAAAATATCTGCGTGCCAAGGTTCTAAGTAGA 297896 Query 48334 TTGCCATTACACCTGGTCGTTTATTACCTCCTTGATCTATATATCTGGCAGTATTGTTAT 48393 | || | | ||||| |||| | || |||||| || ||| | |||| |||||| Sbjct 297895 TAGCAAGTGCACCTCTACGTTGTCTGCCATCTTGATGTACATAACAGGCAAGATTGTTGA 297836 Query 48394 AAACTCTTAACATTGGGACAATACCATTTGATATACCATTGGTTCCCGAAATATAACTTC 48453 | || | ||||| || |||| |||||| |||| ||||| || || || || | | | Sbjct 297835 AGACGCGCAACATAGGAACAAGACCATTCGATACGCCATTAGTACCGGATATCTTCGTAC 297776 Query 48454 CACTAGCTCTTATATTACTAATTGAAAT----ACCTATACCACCTGCCATTTTAGATATT 48509 | | |||| ||| ||| || || | |||| ||||| | | ||| || ||| Sbjct 297775 CTTTTGCTCGTAT----GCAATGGACATTCAGAGCTATGCCACCCGTCGATTTGGAAATT 297720 Query 48510 AGAGCACACCGTTTAAGGGTATCATAAATTCCTTCTATACTATCATCTATCATATTTAAT 48569 |||||| | | | | | | |||| || || || || || ||| |||| Sbjct 297719 TCAGCACATTGCCTTACAGCCTTAAAAATGCCATCAATGGAGTCTTCCGGCATCGTTAAC 297660 Query 48570 AGAAAACAACTAGACATTTGCGGATGACAAGTTCCTGAATTAAATAATGTTGGAGATGCA 48629 | ||||| |||| |||||| || || | | | |||||| |||| || ||| Sbjct 297659 AAGAAACAGGATGACAGTTGCGGGCGAATTGTAGCAGCACCAAATAAAGTTGAGGAAGCA 297600 Query 48630 TGAATAAACCATTTCTCTGATAACAATTTATATGTTTCAATAACAGAATCTATATCCCAT 48689 ||| | || | ||| || | | || || ||||| ||| | | || || || Sbjct 297599 TGAGTGAAGTAACGCTCCGACATGAGATTGTAAGTTTCGATAGCTGCCTCAATGTCGTCG 297540 Query 48690 TGATGTATACCTATAGATACACGCATTAACATATATTGAGGTCTTTCAACAATTTTGTTA 48749 || || || || | |||||||||||||||| ||| || | || |||||||| | Sbjct 297539 CCGTGAATGCCAATGGCGACACGCATTAACATATGTTGTGGCCGCTCCACAATTTTCCCA 297480 Query 48750 TTTATTTTCAAAAGATATGATTTTTCCAATGTTTTAAAACCAAAATAGTTGTA--TGAAA 48807 || || || || | ||| || ||| |||||||| || |||||| | ||||| ||||| Sbjct 297479 TTAATCTTTAACAAATAAGACCGTTCTAATGTTTTGAAGCCAAAAAAATTGTAACTGAAA 297420 Query 48808 AGTCGTTATCATTAATAATTGATGAATTTATTCTTTCCTTATGTTTATATACTACATCCA 48867 ||| ||||| |||||| | ||||||| || || ||| | | ||| || | Sbjct 297419 --TCGCGATCATAAATAATGGCCGAATTTAGTCGATCAGCATGCTCTTTTACAACCTTGT 297362 Query 48868 TTACATTTTTTGATATAATTG------------------ATTCCTTGTAA---AGATCTT 48906 | | ||||||||| | ||| |||| | ||||| Sbjct 297361 AATGGTAATCTGATATAATAGGCGAAGGACAGCCATTATCTTCATTGTGATGTAGATCAC 297302 Query 48907 CTACAACATCACTAAATAttttttttGTTTCTTTATGAAGATTAGATATAGATATTCTAG 48966 || || ||| |||| ||| |||||||||||||| | || |||| || || | | Sbjct 297301 TTATCACTTCAGAGAATACTTTCTTTGTTTCTTTATGCAAGTTTGATACAGCAATACGGG 297242 Query 48967 CAGCTAATATAGCATAATCTGGATGAATTGTTGTACATGTA-CTAGATATTTCTGCTGCT 49025 | ||||| |||||||| || || || || | || |||| | | |||| || ||| Sbjct 297241 CGGCTAAAATAGCATAGTCCGGGTG-ATCGGTGGTCATGCAGGCCGCAGTTTCGGCAGCT 297183 Query 49026 AATATATCTAATTCTTTAGTAGTTACACCTGTATATATTCCTTGAATAACTTTCATTGCT 49085 || |||| ||||||| || || || || | || | || | ||||||| || Sbjct 297182 AAATTATCCAATTCTTGCGTGGTGACGCCGCTGTACAACCCGCTTACTACTTTCAATGTA 297123 Query 49086 ATATTTACTGGATCTATATGATCCATATCCAGTCCATAACATAAtttttttATTCTAGAT 49145 || ||||| | |||||||| || ||||| || || |||| ||||| | Sbjct 297122 ATGGCGGTCGGATCAACGAAATCCATATTAAGACCATAGCACAACTTTTGGATTCTGAAA 297063 Query 49146 GTAATTTTATCAAACATTATATTCTCTTTACGACCGTCACGTTTTATAACAAACA 49200 || ||||| || || || | | ||||| || || ||||| | || |||| Sbjct 297062 GTTATTTTGTCGAAATGTACCATTTGCTTACGGCCATCTCGTTTCACTACGAACA 297008 >seq961 Length=34630 Score = 396 bits (438), Expect = 3e-105 Identities = 1460/2282 (64%), Gaps = 73/2282 (3%) Strand=Plus/Plus Query 46973 TTTTTCCACAGTAAACTTAATTGGATTACTCGCTGATTTTGTTCGTAAATAATACATACC 47032 ||| || || ||||| | || ||||| |||| ||||||| || ||||||||||| Sbjct 3247 TTTATCGACTGTAAATTGTATGGGATTTGCTGCTGGCTTTGTTCTTAGGTAATACATACC 3306 Query 47033 AGTCTTTAAACCTAAACTCCATCCATAGAAATGCATACTAGTTAATTTAGAATAACTAGG 47092 || || ||||| |||||||||| ||||| ||| || ||||||| ||||||||| Sbjct 3307 GGTTTTCAAACCGGCCTTCCATCCATAAAAATGTATAGAAGATAATTTACCATAACTAGG 3366 Query 47093 TTCTGAAATATGAATATTAAGAGATTGACTCTGATCAATAAATGCACCTCTATCAGCTGC 47152 ||| | | || || |||| |||||||| || || || || || || | |||| | || Sbjct 3367 TTCAGCTACGTGTATGTTAAACGATTGACTTTGGTCGATGAAAGCGCCGCGATCAACAGC 3426 Query 47153 CATATCTAAAATAACCCTTTGTGGTATCTCCCATACTGTTTTATAAATTTGTTTAATGTC 47212 ||| | | | || | || ||||| || |||||||| | || ||| ||| Sbjct 3427 CATGTTAATGGTTGATTTTACCGAAATTTCCCAAACCGTTTTATATAATTCTTTTATGCT 3486 Query 47213 TTCTGGGA--GATTAG-TATTTTGAATAGATCCTCCgttttctataattttgttttttaa 47269 || || | | || | | ||||| || || || | | | | | ||| |||||| | Sbjct 3487 GTCAGGTATGGCTTCGATGTTTTGTATTGAGCCGCGATGTGCCAATATTAAGTTTTTCAT 3546 Query 47270 ttcatttgaccaaagttttcgttcagttaatgtttttaaAAGATGAGGATTAACAATTTG 47329 | || |||||| |||||| || ||| | | |||| |||| || | Sbjct 3547 GTTATCATTCCAAAGGCCCAATTCAGTCAAATCTTTAAGCAAATGATGATTGACCACGAT 3606 Query 47330 AAATTCTCCAGATAGTACTCTACGGCTATATATATTACTTGTATATGGTTCTATAGATTC 47389 ||| || ||||| ||||| | || | || | || || ||||| || | ||| || Sbjct 3607 AAACTCACCAGACAGTACGCGTCGTGTGTAAACGTTTGAAGTGTATGGCTCAAAAGACTC 3666 Query 47390 ATTATTTCCAAAAATTTGAGCAGTTGATGCTGTAGGCATGGATGCAACTAATAAGCTATT 47449 || || |||| |||||||||||| || || |||||||| | || || | || ||| Sbjct 3667 GTTGTTACCAAGAATTTGAGCAGTAGACGCCGTAGGCATTGGAGCTACCAGCAAAGAATT 3726 Query 47450 TCTTACTCCATATTTTTGTATCTNNNNNNNNNNNNGTTTCCAATCCCAAAGATCTGATGG 47509 | |||||||| ||| || | ||||| ||| ||||| | || Sbjct 3727 GCGCACTCCATAACTTTTAATGTCGTCTTTAAGAGCCGACCAATTCCATAGATCAGTAGG 3786 Query 47510 AACAACATTCCAAAAATCATATTGAAGAATTCCTTTACTTATCGGAGAACCATTATATGT 47569 || ||| | |||||||||||| || |||||||| | ||| ||| | ||| || Sbjct 3787 CGTTTTATCCCACATATCATATTGAAGGATACCTTTACTAACTGGACTACCTTCATAGGT 3846 Query 47570 TTTATAAGGACCGTATAGTTTAGCGAGTTCACAACTTGCTTCCAATGCACTATAATATAT 47629 || || |||||||| |||| || | ||||||||| ||||| || |||| ||||||||| Sbjct 3847 TTCGTACGGACCGTACTGTTTGGCCAATTCACAACTAGCTTCTAAGGCACCATAATATAT 3906 Query 47630 TGTTTCAAATATTTTTATGTTTAGA--TTCCTTGCTTCTGATGATTCAAAAGGATANNNN 47687 ||||||||| |||| | | |||| | | ||| | | |||| | ||||| Sbjct 3907 TGTTTCAAAAATTTGTTTATTTAAGCGTGCAGCACTTTCGCT--TTCATAGGGATAACGC 3964 Query 47688 NNNNNNNNNAATGTATCTGCCAATCCTTGAACACCAATACCAATTGGTCTATGAGTTTTA 47747 | || || || |||||||| ||||| | ||||||||| | |||| | Sbjct 3965 ATTAAAATTAGTGCGTCAGCAAATCCTTGGACACCTAAACCAATTGGACGATGACGAAAA 4024 Query 47748 TTAGAAAACTCAGCTTCTGGTAATGGATATTTGTTTATATCTATAATTTTATTTAGANNN 47807 ||||| | ||| | | ||||| | || | ||| || || || || || Sbjct 4025 TTAGACTTTCTGGTTTCCGACAGCGGATAGTAATTGACATCGATTATCTTGTTGAGGTTT 4084 Query 47808 NNNNNNNNNNNNNNNACAATTTCTCTTAATTTATTAAAATCAAACTTGTTATTTATA--- 47864 ||| |||| | | ||| | ||||||| | | |||| | | Sbjct 4085 CTTGTTATAAGCTTGGCAACTTCTTTGAGTTTGTGAAAATCATATTGTTTATCTGTGGTC 4144 Query 47865 ACAAACCTATTAAGTGCTATAGATGCTAGATTACATACAGCTACCTCATTTGGATTA-GT 47923 || ||| |||| | || || || |||||||| || || |||| || || | | | || Sbjct 4145 ACGAACATATTCAACGCAATTGAGGCTAGATTGCAAACTGCTATTTC-TTCAGCTGATGT 4203 Query 47924 ATATTGTATTATTTCAGCACATAGATTACCACATTTGATAGTACCCAAATTTTGATGATT 47983 ||||| | |||||| | ||| | |||| ||||| ||||| || | ||| || ||||| Sbjct 4204 ATATTCGACTATTTCTGTACACAAGTTACTGCATTTTATAGTGCCAACATTCTGTTGATT 4263 Query 47984 ATTNNNNTTGTTACATGCGTCCTTGTAAAGCATAAAAGGTGTTCCAGTTTCTATCTGAGA 48043 | | ||||| || || ||||||||||| |||| || || || |||| |||| Sbjct 4264 ACTTTTACGATTACAAGCATCTTTGTAAAGCATGTAAGGAGTCCCGGTCTCTACTTGAG- 4322 Query 48044 TTCAATGATAGATTTCCAAACAG---TC-CTAGCCTTTATAACAGCTCTA---GCTTTAT 48096 || || | ||| | || || || | ||| ||||| | | || ||||| Sbjct 4323 --CACTGC-ATATTGCGAACCATAAATCACGAGCTTTTATT---GTTTTATTCGCTTTGC 4376 Query 48097 TATCATGTTCGTATTTAGTATATAACTTCTCAAATTCATCCCCATACACATTATCTAACC 48156 || | ||||||||| | ||||| || ||||||| ||| ||||| | | | || | Sbjct 4377 CCTCGTCTTCGTATTTTATGTATAATTTATCAAATTTATCTCCATAAATTTCACACAAGC 4436 Query 48157 CAGGACATTCATTAGGACACATCAATGACCAATCCTCATCATTTTTTACTCTAGTCATAA 48216 |||| |||| || |||||||| | ||||||| ||||||| | |||||| |||| | Sbjct 4437 CAGGGCATTTATGGGGACACATTAGAGACCAATGCTCATCAGCCTCTACTCTTTTCATGA 4496 Query 48217 ATATATCTGGTATCCAAAGAGCTATAAATAAATCCCTAGTTCTTAGTTCTTCATTGCCAC 48276 | | ||| |||||||| ||||| ||||||||||| | | |||||| || || Sbjct 4497 AAAGATCCGGTATCCACAGAGCATAAAATAAATCCCGTGCACGATCTTCTTCTTTACCCG 4556 Query 48277 TATTCCTTTTAAGTTCAAGAAAGTCCATTATATCAGCATGCCATGGTTCTAAATATATTG 48336 ||||| |||| | | ||||| || | |||||| |||||||| || ||||| ||||| | Sbjct 4557 TATTCTTTTTCAAATTGAGAAATTCGAATATATCTGCATGCCAAGGCTCTAAGTATATAG 4616 Query 48337 CCATTACACCTGGTCGTTTATTACCTCCTTGATCTATATATCTGGCAGTATTGTTATAAA 48396 | | | || || ||||| ||| ||||| || | ||| | |||| |||||| | | Sbjct 4617 CAAAAGCCCCCGGACGTTTTCCACCACCTTGGTCGACATAACGGGCAACATTGTTGAACA 4676 Query 48397 CTCTTAACATTGGGACAATACCATTTGATA---TACCATTGGTTCCCGAAATATAACTTC 48453 | ||||| || |||| |||| || | ||||| | || || || | | | Sbjct 4677 GACGCAACATAGGAACAAGGCCATCAGACACGTCACCAT---TACCAGATATCTTTGTCC 4733 Query 48454 CACTAGCTCTTA---TATTACTAATTGAAATACCTATACCACCTGCCATTTTAGATATTA 48510 | | |||| || || | || || | |||||| ||||| ||| ||||| ||| Sbjct 4734 CTTTTGCTCGTACGCAATGAATATTT---AGACCTATCCCACCGGCCGACTTAGAAATTT 4790 Query 48511 GAGCACA-CCGTTTAAGGGTATCATAAATTCCTTCTATACTATCATCTATCATATTTAAT 48569 |||||| || || | |||| ||| || || || || || |||| ||| Sbjct 4791 TAGCACATTGGTCTACAGCCTTCAT-AATACCATCAATGGAGTCTTCCGGCATAGTTAGC 4849 Query 48570 AGAAAACAACTAGACATTTGCGGATGACAAGTTCCTGAATTAAATAATGTTGGAGATGCA 48629 | || || |||| ||| || | || | | | |||||| ||||| || ||| Sbjct 4850 AAGAAGCAGGACGACAATTGTGGGCGTATGGTAGCAGCACCAAATAAAGTTGGGGAAGCA 4909 Query 48630 TGAATAAACCATTTCTCTGATAACAATTTATATGTTTCAATAACAGAATCTATATCCCAT 48689 ||| |||| | ||| || | | ||||| ||||||||| | | || || | ||| Sbjct 4910 TGAGTAAAGTAACGCTCCGACATGAGATTATAAGTTTCAATAGCTGCTTCAATGT--CAT 4967 Query 48690 TG--ATGTATACCTATAGATACACGCATTAACATATATTGAGGTCTTTCAACAATTTTGT 48747 | || || || || | |||||||||||||||| ||| || | || ||||||||| Sbjct 4968 CGCCGTGAATGCCAATGGCGACACGCATTAACATATGTTGTGGCCGCTCCACAATTTTGC 5027 Query 48748 TATTTATTTTCAAAAGATATGATTTTTCCAATGTTTTAAAACCAAAATAGTTGTATGAAA 48807 || || || || | ||| || ||| || |||||||| |||||| | || || || Sbjct 5028 CGTTAATCTTTAATAAATAAGACCGTTCTAAAGTTTTAAAGCCAAAAAAATTATAACTAA 5087 Query 48808 AGTCGTTATCATTAATAATTGATGAATTTATTCTTTCCTTATGTTTATATACTACATCCA 48867 | ||| ||| | ||||| | ||||| | || || | || | | |||| || Sbjct 5088 AATCGCGATCGTAGATAATAGCAGAATTCAGTCGATC---AGCATTCTCTCTTACAACCT 5144 Query 48868 TTACAT---TTTTTGATATAATTG------------------ATTCCTTG---TAAAGAT 48903 | || | ||||||||| | ||| ||| || |||| Sbjct 5145 TGTAATGGAAATCTGATATAATAGGGGAAGGAAAGCCATTATCTTCATTGCGATATAGAT 5204 Query 48904 CTTCTACAACATCACTAAATAttttttttGTTTCTTTATGAAGATTAGATATAGATATTC 48963 | || || ||| || | ||| ||||||||||| || | || || | | || | Sbjct 5205 CAGTTATCACTTCAGAGAAGACTTTCTTTGTTTCTTTGTGCAAGTTTGACACTGCAATAC 5264 Query 48964 TAGCAGCTAATATAGCATAATCTGGATGAATTGTTGTACATG-TACTAGATATTTCTGCT 49022 ||| ||||| |||||||| ||||| || || | || |||| | || |||| || Sbjct 5265 GAGCCGCTAAAATAGCATAGTCTGGGTG-ATCGGTGGTCATGCAAGCAGCAGTTTCAGCA 5323 Query 49023 GCTAATATATCTAATTCTTTAGTAGTTACACCTGTATATATTCCTTGAATAACTTTCATT 49082 ||||| |||| ||||||| ||||| || || || | || | ||||||| Sbjct 5324 GCTAAATTATCCAATTCTTGTGTAGTGACGCCGCAGTACAACCCGCTTACTACTTTCAAA 5383 Query 49083 GCTATATTTACTGGATCTATATGATCCATATCCAGTCCATAACATAAtttttttATTCTA 49142 | || ||||| | |||||||| || ||||| || || |||| ||||| Sbjct 5384 GTAATGGCAGTCGGATCAACGAAATCCATATTAAGACCATAGCACAACTTTTGGATTCTG 5443 Query 49143 GATGTAATTTTATCAAACATTATATTCTCTTTACGACCGTCACGTTTTATAACAAACATC 49202 | || |||||||| || | | || |||||||| || ||||| | || |||| | Sbjct 5444 AAAGTTATTTTATCGAAATGGACCATTTCCTTACGACCATCCCGTTTCACCACGAACAAC 5503 Query 49203 TT 49204 || Sbjct 5504 TT 5505 >seq362 Length=381446 Score = 392 bits (434), Expect = 4e-104 Identities = 1459/2282 (64%), Gaps = 73/2282 (3%) Strand=Plus/Minus Query 46973 TTTTTCCACAGTAAACTTAATTGGATTACTCGCTGATTTTGTTCGTAAATAATACATACC 47032 ||| || || ||||| | || ||||| |||| ||||||| || ||||||||||| Sbjct 9487 TTTATCGACTGTAAATTGTATGGGATTTGCTGCTGGCTTTGTTCTTAGGTAATACATACC 9428 Query 47033 AGTCTTTAAACCTAAACTCCATCCATAGAAATGCATACTAGTTAATTTAGAATAACTAGG 47092 || || ||||| |||||||||| ||||| ||| || ||||||| ||||||||| Sbjct 9427 GGTTTTCAAACCGGCCTTCCATCCATAAAAATGTATAGAAGATAATTTACCATAACTAGG 9368 Query 47093 TTCTGAAATATGAATATTAAGAGATTGACTCTGATCAATAAATGCACCTCTATCAGCTGC 47152 ||| | | || || |||| |||||||| || || || || || || | |||| | || Sbjct 9367 TTCAGCTACGTGTATGTTAAACGATTGACTTTGGTCGATGAAAGCGCCGCGATCAACAGC 9308 Query 47153 CATATCTAAAATAACCCTTTGTGGTATCTCCCATACTGTTTTATAAATTTGTTTAATGTC 47212 ||| | | | || | || ||||| || |||||||| | || ||| ||| Sbjct 9307 CATGTTAATGGTTGATTTTACCGAAATTTCCCAAACCGTTTTATATAATTCTTTTATGCT 9248 Query 47213 TTCTGGGA--GATTAG-TATTTTGAATAGATCCTCCgttttctataattttgttttttaa 47269 || || | | || | | ||||| || || || | | | | | ||| |||||| | Sbjct 9247 GTCAGGTATGGCTTCGATGTTTTGTATTGAGCCGCGATGTGCCAATATTAAGTTTTTCAT 9188 Query 47270 ttcatttgaccaaagttttcgttcagttaatgtttttaaAAGATGAGGATTAACAATTTG 47329 | || |||||| |||||| || ||| | | |||| |||| || | Sbjct 9187 GTTATCATTCCAAAGGCCCAATTCAGTCAAATCTTTAAGCAAATGATGATTGACCACGAT 9128 Query 47330 AAATTCTCCAGATAGTACTCTACGGCTATATATATTACTTGTATATGGTTCTATAGATTC 47389 ||| || ||||| ||||| | || | || | || || ||||| || | ||| || Sbjct 9127 AAACTCACCAGACAGTACGCGTCGTGTGTAAACGTTTGAAGTGTATGGCTCAAAAGACTC 9068 Query 47390 ATTATTTCCAAAAATTTGAGCAGTTGATGCTGTAGGCATGGATGCAACTAATAAGCTATT 47449 || || |||| |||||||||||| || || |||||||| | || || | || ||| Sbjct 9067 GTTGTTACCAAGAATTTGAGCAGTAGACGCCGTAGGCATTGGAGCTACCAGCAAAGAATT 9008 Query 47450 TCTTACTCCATATTTTTGTATCTNNNNNNNNNNNNGTTTCCAATCCCAAAGATCTGATGG 47509 | |||||||| ||| || | ||||| ||| ||||| | || Sbjct 9007 GCGCACTCCATAACTTTTAATGTCGTCTTTAAGAGCCGACCAATTCCATAGATCAGTAGG 8948 Query 47510 AACAACATTCCAAAAATCATATTGAAGAATTCCTTTACTTATCGGAGAACCATTATATGT 47569 || ||| | |||||||||||| || |||||||| | ||| ||| | ||| || Sbjct 8947 CGTTTTATCCCACATATCATATTGAAGGATACCTTTACTAACTGGACTACCTTCATAGGT 8888 Query 47570 TTTATAAGGACCGTATAGTTTAGCGAGTTCACAACTTGCTTCCAATGCACTATAATATAT 47629 || || |||||||| |||| || | ||||||||| ||||| || |||| ||||||||| Sbjct 8887 TTCGTACGGACCGTACTGTTTGGCCAATTCACAACTAGCTTCTAAGGCACCATAATATAT 8828 Query 47630 TGTTTCAAATATTTTTATGTTTAGA--TTCCTTGCTTCTGATGATTCAAAAGGATANNNN 47687 ||||||||| |||| | | |||| | | ||| | | |||| | ||||| Sbjct 8827 TGTTTCAAAAATTTGTTTATTTAAGCGTGCAGCACTTTCGCT--TTCATAGGGATAACGC 8770 Query 47688 NNNNNNNNNAATGTATCTGCCAATCCTTGAACACCAATACCAATTGGTCTATGAGTTTTA 47747 | || || || |||||||| ||||| | ||||||||| | |||| | Sbjct 8769 ATTAAAATTAGTGCGTCAGCAAATCCTTGGACACCTAAACCAATTGGACGATGACGAAAA 8710 Query 47748 TTAGAAAACTCAGCTTCTGGTAATGGATATTTGTTTATATCTATAATTTTATTTAGANNN 47807 ||||| | ||| | | ||||| | || | ||| || || || || || Sbjct 8709 TTAGACTTTCTGGTTTCCGACAGCGGATAGTAATTGACATCGATTATCTTGTTGAGGTTT 8650 Query 47808 NNNNNNNNNNNNNNNACAATTTCTCTTAATTTATTAAAATCAAACTTGTTATTTATA--- 47864 ||| |||| | | ||| | ||||||| | | |||| | | Sbjct 8649 CTTGTTATAAGCTTGGCAACTTCTTTGAGTTTGTGAAAATCATATTGTTTATCTGTGGTC 8590 Query 47865 ACAAACCTATTAAGTGCTATAGATGCTAGATTACATACAGCTACCTCATTTGGATTA-GT 47923 || ||| |||| | || || || |||||||| || || |||| || || | | | || Sbjct 8589 ACGAACATATTCAACGCAATTGAGGCTAGATTGCAAACTGCTATTTC-TTCAGCTGATGT 8531 Query 47924 ATATTGTATTATTTCAGCACATAGATTACCACATTTGATAGTACCCAAATTTTGATGATT 47983 ||||| | ||||| | ||| | |||| ||||| ||||| || | ||| || ||||| Sbjct 8530 ATATTCGACGATTTCTGTACACAAGTTACTGCATTTTATAGTGCCAACATTCTGTTGATT 8471 Query 47984 ATTNNNNTTGTTACATGCGTCCTTGTAAAGCATAAAAGGTGTTCCAGTTTCTATCTGAGA 48043 | | ||||| || || ||||||||||| |||| || || || |||| |||| Sbjct 8470 ACTTTTACGATTACAAGCATCTTTGTAAAGCATGTAAGGAGTCCCGGTCTCTACTTGAG- 8412 Query 48044 TTCAATGATAGATTTCCAAACAG---TC-CTAGCCTTTATAACAGCTCTA---GCTTTAT 48096 || || | ||| | || || || | ||| ||||| | | || ||||| Sbjct 8411 --CACTGC-ATATTGCGAACCATAAATCACGAGCTTTTATT---GTTTTATTCGCTTTGC 8358 Query 48097 TATCATGTTCGTATTTAGTATATAACTTCTCAAATTCATCCCCATACACATTATCTAACC 48156 || | ||||||||| | ||||| || ||||||| ||| ||||| | | | || | Sbjct 8357 CCTCGTCTTCGTATTTTATGTATAATTTATCAAATTTATCTCCATAAATTTCACACAAGC 8298 Query 48157 CAGGACATTCATTAGGACACATCAATGACCAATCCTCATCATTTTTTACTCTAGTCATAA 48216 |||| |||| || |||||||| | ||||||| ||||||| | |||||| |||| | Sbjct 8297 CAGGGCATTTATGGGGACACATTAGAGACCAATGCTCATCAGCCTCTACTCTTTTCATGA 8238 Query 48217 ATATATCTGGTATCCAAAGAGCTATAAATAAATCCCTAGTTCTTAGTTCTTCATTGCCAC 48276 | | ||| |||||||| ||||| ||||||||||| | | |||||| || || Sbjct 8237 AAAGATCCGGTATCCACAGAGCATAAAATAAATCCCGTGCACGATCTTCTTCTTTACCCG 8178 Query 48277 TATTCCTTTTAAGTTCAAGAAAGTCCATTATATCAGCATGCCATGGTTCTAAATATATTG 48336 ||||| |||| | | ||||| || | |||||| |||||||| || ||||| ||||| | Sbjct 8177 TATTCTTTTTCAAATTGAGAAATTCGAATATATCTGCATGCCAAGGCTCTAAGTATATAG 8118 Query 48337 CCATTACACCTGGTCGTTTATTACCTCCTTGATCTATATATCTGGCAGTATTGTTATAAA 48396 | | | || || ||||| ||| ||||| || | ||| | |||| |||||| | | Sbjct 8117 CAAAAGCCCCCGGACGTTTTCCACCACCTTGGTCGACATAACGGGCAACATTGTTGAACA 8058 Query 48397 CTCTTAACATTGGGACAATACCATTTGATA---TACCATTGGTTCCCGAAATATAACTTC 48453 | ||||| || |||| |||| || | ||||| | || || || | | | Sbjct 8057 GACGCAACATAGGAACAAGGCCATCAGACACGTCACCAT---TACCAGATATCTTTGTCC 8001 Query 48454 CACTAGCTCTTA---TATTACTAATTGAAATACCTATACCACCTGCCATTTTAGATATTA 48510 | | |||| || || | || || | |||||| ||||| ||| ||||| ||| Sbjct 8000 CTTTTGCTCGTACGCAATGAATATTT---AGACCTATCCCACCGGCCGACTTAGAAATTT 7944 Query 48511 GAGCACA-CCGTTTAAGGGTATCATAAATTCCTTCTATACTATCATCTATCATATTTAAT 48569 |||||| || || | |||| ||| || || || || || |||| ||| Sbjct 7943 TAGCACATTGGTCTACAGCCTTCAT-AATACCATCAATGGAGTCTTCCGGCATAGTTAGC 7885 Query 48570 AGAAAACAACTAGACATTTGCGGATGACAAGTTCCTGAATTAAATAATGTTGGAGATGCA 48629 | || || |||| ||| || | || | | | |||||| ||||| || ||| Sbjct 7884 AAGAAGCAGGACGACAATTGTGGGCGTATGGTAGCAGCACCAAATAAAGTTGGGGAAGCA 7825 Query 48630 TGAATAAACCATTTCTCTGATAACAATTTATATGTTTCAATAACAGAATCTATATCCCAT 48689 ||| |||| | ||| || | | ||||| ||||||||| | | || || | ||| Sbjct 7824 TGAGTAAAGTAACGCTCCGACATGAGATTATAAGTTTCAATAGCTGCTTCAATGT--CAT 7767 Query 48690 TG--ATGTATACCTATAGATACACGCATTAACATATATTGAGGTCTTTCAACAATTTTGT 48747 | || || || || | |||||||||||||||| ||| || | || ||||||||| Sbjct 7766 CGCCGTGAATGCCAATGGCGACACGCATTAACATATGTTGTGGCCGCTCCACAATTTTGC 7707 Query 48748 TATTTATTTTCAAAAGATATGATTTTTCCAATGTTTTAAAACCAAAATAGTTGTATGAAA 48807 || || || || | ||| || ||| || |||||||| |||||| | || || || Sbjct 7706 CGTTAATCTTTAATAAATAAGACCGTTCTAAAGTTTTAAAGCCAAAAAAATTATAACTAA 7647 Query 48808 AGTCGTTATCATTAATAATTGATGAATTTATTCTTTCCTTATGTTTATATACTACATCCA 48867 | ||| ||| | ||||| | ||||| | || || | || | | |||| || Sbjct 7646 AATCGCGATCGTAGATAATAGCAGAATTCAGTCGATC---AGCATTCTCTCTTACAACCT 7590 Query 48868 TTACAT---TTTTTGATATAATTG------------------ATTCCTTG---TAAAGAT 48903 | || | ||||||||| | ||| ||| || |||| Sbjct 7589 TGTAATGGAAATCTGATATAATAGGGGAAGGAAAGCCATTATCTTCATTGCGATATAGAT 7530 Query 48904 CTTCTACAACATCACTAAATAttttttttGTTTCTTTATGAAGATTAGATATAGATATTC 48963 | || || ||| || | ||| ||||||||||| || | || || | | || | Sbjct 7529 CAGTTATCACTTCAGAGAAGACTTTCTTTGTTTCTTTGTGCAAGTTTGACACTGCAATAC 7470 Query 48964 TAGCAGCTAATATAGCATAATCTGGATGAATTGTTGTACATG-TACTAGATATTTCTGCT 49022 ||| ||||| |||||||| ||||| || || | || |||| | || |||| || Sbjct 7469 GAGCCGCTAAAATAGCATAGTCTGGGTG-ATCGGTGGTCATGCAAGCAGCAGTTTCAGCA 7411 Query 49023 GCTAATATATCTAATTCTTTAGTAGTTACACCTGTATATATTCCTTGAATAACTTTCATT 49082 ||||| |||| ||||||| ||||| || || || | || | ||||||| Sbjct 7410 GCTAAATTATCCAATTCTTGTGTAGTGACGCCGCAGTACAACCCGCTTACTACTTTCAAA 7351 Query 49083 GCTATATTTACTGGATCTATATGATCCATATCCAGTCCATAACATAAtttttttATTCTA 49142 | || ||||| | |||||||| || ||||| || || |||| ||||| Sbjct 7350 GTAATGGCAGTCGGATCAACGAAATCCATATTAAGACCATAGCACAACTTTTGGATTCTG 7291 Query 49143 GATGTAATTTTATCAAACATTATATTCTCTTTACGACCGTCACGTTTTATAACAAACATC 49202 | || |||||||| || | | || |||||||| || ||||| | || |||| | Sbjct 7290 AAAGTTATTTTATCGAAATGGACCATTTCCTTACGACCATCCCGTTTCACCACGAACAAC 7231 Query 49203 TT 49204 || Sbjct 7230 TT 7229 >seq158 Length=613782 Score = 313 bits (346), Expect = 3e-80 Identities = 506/722 (70%), Gaps = 8/722 (1%) Strand=Plus/Plus Query 18776 CTAATTCTAATAGTAGTCTATCCGCTACAAATTTAATATATGTGTTCATCATATCACAAT 18835 ||| ||||||||| | | ||| || ||| ||| |||||| | ||| | || | | Sbjct 555560 CTAGTTCTAATAGCAAACGATCGGCAACATATTCTATATATTTACACATACTTTCGCTGT 555619 Query 18836 TCATTCCTATTAATTTAACAGGTAGTGCATCTGTAAGAAATTCTTGTTCTATATTTACTG 18895 |||| || ||||| | || |||| || ||||| | ||| |||| ||| || || || | Sbjct 555620 TCATGCCAATTAAGTCGACTGGTAAGGCCTCTGTCAAAAACTCTTTTTCAATTTTAACGG 555679 Query 18896 CCTCTGATATAATAGATACAACTCTATCTTCATTAGGAGGGTATAGAAGATGTTTAAACA 18955 | |||| ||| || | || | |||| | || | || | ||||||||||| Sbjct 555680 CATCTGTTATTATTTCCAAAATCCGTTCTTTGCTCGGTTTTTGTATCAAATGTTTAAACA 555739 Query 18956 TCAAACATGCAAAATCACAATGTAGTCCCTCGTCTCTACTTATCAATTCATTAGAAAATG 19015 | || ||||| ||||| || | || || || | ||||| ||||||||| || | Sbjct 555740 TTAATACCGCAAATTCACAGTGCAAGCCTTCATCGCGTGATATCATTTCATTAGAGAACG 555799 Query 19016 TTAAACCAGGCATCAGTCCTCttttttttAACCAGAATATAGAAGCAAATGATCCAGAAA 19075 ||||||| ||||| | ||| | ||| |||| ||| ||||| ||||| || ||| || Sbjct 555800 TTAAACCTGGCATTATTCCACGTTTCTTTAGCCAAAATATCGAAGCGAAGCTCCCACTAA 555859 Query 19076 AGAATATACCTTCTACTGCTGCAAAAGCAACTAGTCTTTCTCCATAACTAGCATCATTAT 19135 ||||||||||||| || || || ||||| | | | ||| || || |||| | | Sbjct 555860 AGAATATACCTTCGACGGCAGCGAAAGCTATAACACGTTCACCGAAATTAGC-CGAATGC 555918 Query 19136 TATGA-ATCCATTTCAGTGCCCAATCAGCCTTCTTTTTTACACATGGCATTGTCTCTATA 19194 |||| ||||| |||||||| || |||||||| || || ||||||||||||| || Sbjct 555919 GATGATATCCAAGCTAGTGCCCATTCCGCCTTCTTCTTAACCAATGGCATTGTCTCAATG 555978 Query 19195 GAATTAAATAGATACATACGCTCATCTGT---ATCTTTAACATATGCATCTATCAATAAA 19251 | ||||||||||| || | || ||| | |||| | | ||||| || || | |||| Sbjct 555979 GCATTAAATAGAT--ATTC-CTTTTCTTTCTCATCTCTGATATATGTTTCGATAAGTAAA 556035 Query 19252 CTGTACATTTCTGAATGAATATTTTCTATAGCCATCTGAAATCCGTAAAAACATCTTGCT 19311 || |||||||| || || | |||||| || || || ||||| || ||||| || | |||| Sbjct 556036 CTATACATTTCCGAGTGTACATTTTCCATGGCAATTTGAAACCCATAAAAGCAACGTGCT 556095 Query 19312 TCTGTTATCTGTACTTCACTACAAAATCTTTCGACCAAATTTTCATTAACTATTCCATCA 19371 || ||||| || || || |||||| ||| || ||||| |||||||| || ||||| Sbjct 556096 TCGGTTATTTGAACCTCTTGGGAAAATCGTTCCACTAAATTCTCATTAACAATACCATCG 556155 Query 19372 CTAGCTGCAAAAAATGCTAATACATGTTTAATAAAATGTTTTTCATCTGAGGTTAATGTA 19431 || |||||||| || || || ||| ||||||||| ||| | |||| | Sbjct 556156 GATGCCGCAAAAAAAGCCAAAACGTGTGAAATAAAATGACGTTCGCCATTACTTAACCGA 556215 Query 19432 TTCCAATCATTAATATCTTTAGATAAATCTACTTCTTCAACTGTCCAAAAAGAAGCCTCT 19491 |||||||| | ||||||||||| | || |||||||| | ||||||||||| || || Sbjct 556216 TTCCAATCGTCGATATCTTTAGAGAGGTCAACTTCTTCTGCAGTCCAAAAAGAGGCTTCC 556275 Query 19492 GC 19493 || Sbjct 556276 GC 556277 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 562081214510640