Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Glossina_20palpalis_20gambiensis_20[genbank_20GCA_5F000818775.1_2020
15-01-15] 3,926 sequences; 380,104,241 total letters
Query= NC_022646.1
Length=101818
Score E
Sequences producing significant alignments: (Bits) Value
seq180 111 1e-19
seq343 84.2 1e-11
>seq180
Length=539930
Score = 111 bits (122), Expect = 1e-19
Identities = 139/191 (73%), Gaps = 0/191 (0%)
Strand=Plus/Plus
Query 34787 TCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAG 34846
|| || ||||| ||||| || || | |||| |||| |||| ||||||||| |||||
Sbjct 121412 TCTTTTTGAATATTATAATCGGACAATGTGCGACCATCTTCCAATTGCTTTCCAGCGAAA 121471
Query 34847 ATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGAT 34906
|||| |||||||||||| | || | ||||| ||||| | || || ||| || |
Sbjct 121472 ATCAATCGTTGCTGGTCGGGTGGAATTCCCTCTTTGTCCTGAATCTTGGCTTTTACATTT 121531
Query 34907 GCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACA 34966
| || | || || ||||| |||| || |||||||| ||||| ||||| ||||||
Sbjct 121532 TCGATAGTGTCCGAGGGTTCGACCTCAAGAGTGATGGTCTTGCCCGTTAGGGTTTTTACA 121591
Query 34967 AAGATCTGCAT 34977
|| ||||||||
Sbjct 121592 AAAATCTGCAT 121602
>seq343
Length=430003
Score = 84.2 bits (92), Expect = 1e-11
Identities = 90/119 (76%), Gaps = 0/119 (0%)
Strand=Plus/Plus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
||||||| || | ||| |||||||||||| ||||| || || | | |||| | ||
Sbjct 57492 AGGACCAAATGCAAGGTTGACTCCTTCTGAATATTATAATCGGACAAGGTGCGTCCGTCT 57551
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884
||||||||||| ||||| || |||| |||||||||||| | || | || || |||||
Sbjct 57552 TCCAGTTGCTTGCCGGCAAAAATCAAACGTTGCTGGTCTGGAGGAATACCTTCTTTGTC 57610
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 325677216210194
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |