Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Glossina_20palpalis_20gambiensis_20[genbank_20GCA_5F000818775.1_2020 15-01-15] 3,926 sequences; 380,104,241 total letters Query= NC_023177.1 Length=124688 Score E Sequences producing significant alignments: (Bits) Value seq110 95.1 1e-14 >seq110 Length=875010 Score = 95.1 bits (104), Expect = 1e-14 Identities = 148/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 107553 AAAATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCT 107612 ||||||||||||||||| |||||| | || |||||||| ||||| | ||| ||| || Sbjct 86202 AAAATGCAAATTTTTGTTAAAACTCTTACTGGCAAAACTATTACTTTGGAAGTTGAGCCT 86261 Query 107613 GGCGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGAT 107672 ||| ||| | | | || || || ||| |||||||||||| | || ||| Sbjct 86262 TCCGACACTATTGAAAATGTCAAGGCCAAAATTCAGGATAAAGAAGGCATTCCTCCAGAT 86321 Query 107673 CAGCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTAC 107732 || || | | |||| || |||||||| |||| || | || | |||| || Sbjct 86322 CAACAACGTTTGATTTTCGCTGGTAAACAATTGGAAGATGGGCGGACTTTATCGGATTAT 86381 Query 107733 AACATTCAAAAGGAGTCTACGTTGCACATGGT 107764 ||||| ||||||||||| || |||||| |||| Sbjct 86382 AACATACAAAAGGAGTCGACCTTGCACTTGGT 86413 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 398857714493014