Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Habropoda_20laboriosa_20[refseq_20GCF_5F001263275.1_202015-08-13] 27,566 sequences; 296,954,667 total letters Query= NC_001266.1 Length=159857 Score E Sequences producing significant alignments: (Bits) Value seq284 105 7e-18 >seq284 Length=1419496 Score = 105 bits (116), Expect = 7e-18 Identities = 121/163 (74%), Gaps = 0/163 (0%) Strand=Plus/Minus Query 16472 ATATACGTATCAATCAGTAAACTGTACATTTCTGAGTGTATGTTCTCTATGGCTATCTGA 16531 ||||| ||||| || | ||| ||||||||||||||| | || || || || | ||| Sbjct 890235 ATATATGTATCGATTAACAAAGAGTACATTTCTGAGTGCACATTTTCCATTGCAACTTGA 890176 Query 16532 AATCCATAGAAGCATCGAGCCTCCGCTATTTGTACTTCCACGTAAAATCGTTCCGCCAGG 16591 || ||||| ||||| || ||||| | |||||| || ||| | ||||||||| | || Sbjct 890175 AAGCCATAAAAGCAACGTGCCTCTGTTATTTGCACCTCCTGGCTAAATCGTTCAACAAGA 890116 Query 16592 TTCTCATTCACGATACCGTCACTTGCAGCAAAAAACGCCAATA 16634 || ||||| || || || ||| ||||||||||| || |||| Sbjct 890115 TTTTCATTGACAATTCCATCAGAAGCAGCAAAAAATGCTAATA 890073 Score = 93.3 bits (102), Expect = 4e-14 Identities = 137/194 (71%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 16031 AATCTATCTGCTACAAATTCTATATATTGACACATTAAGTCGCAATTAATTCCTATAAGT 16090 ||||| || || |||||||| |||||||| ||||| | | || || || ||||| | | Sbjct 890854 AATCTGTCCGCAACAAATTCAATATATTGGCACATGAGTTTACAGTTCATGCCTATCATT 890795 Query 16091 CGTACCGGAAGAGCTTTTGTTAAAAATTGTTGTTCTATCACAACCGCTTCTTTAATGATA 16150 || || | ||| | |||||||||| |||||| || ||||| |||||||| || Sbjct 890794 TCAACGGGTAAAGCGTCAGTTAAAAATTCTTGTTCAATTTGGACCGCGTCTTTAATAATT 890735 Query 16151 TCGGTGGCTCGTGTTTCAGACGGTGTATGGTTTAGGTGTTTAAACATTAGACACGCGAAG 16210 ||| | ||| | || ||| | || | | |||||||||||||| || || || Sbjct 890734 GATGTGACGCGTTCATTCGAAGGTTTCTGTATGATGTGTTTAAACATTAAGCATGCAAAA 890675 Query 16211 TCGCAATGTAGTCC 16224 |||||||| | ||| Sbjct 890674 TCGCAATGCAATCC 890661 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511238179383120