Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Habropoda_20laboriosa_20[refseq_20GCF_5F001263275.1_202015-08-13]
27,566 sequences; 296,954,667 total letters
Query= NC_001266.1
Length=159857
Score E
Sequences producing significant alignments: (Bits) Value
seq284 105 7e-18
>seq284
Length=1419496
Score = 105 bits (116), Expect = 7e-18
Identities = 121/163 (74%), Gaps = 0/163 (0%)
Strand=Plus/Minus
Query 16472 ATATACGTATCAATCAGTAAACTGTACATTTCTGAGTGTATGTTCTCTATGGCTATCTGA 16531
||||| ||||| || | ||| ||||||||||||||| | || || || || | |||
Sbjct 890235 ATATATGTATCGATTAACAAAGAGTACATTTCTGAGTGCACATTTTCCATTGCAACTTGA 890176
Query 16532 AATCCATAGAAGCATCGAGCCTCCGCTATTTGTACTTCCACGTAAAATCGTTCCGCCAGG 16591
|| ||||| ||||| || ||||| | |||||| || ||| | ||||||||| | ||
Sbjct 890175 AAGCCATAAAAGCAACGTGCCTCTGTTATTTGCACCTCCTGGCTAAATCGTTCAACAAGA 890116
Query 16592 TTCTCATTCACGATACCGTCACTTGCAGCAAAAAACGCCAATA 16634
|| ||||| || || || ||| ||||||||||| || ||||
Sbjct 890115 TTTTCATTGACAATTCCATCAGAAGCAGCAAAAAATGCTAATA 890073
Score = 93.3 bits (102), Expect = 4e-14
Identities = 137/194 (71%), Gaps = 0/194 (0%)
Strand=Plus/Minus
Query 16031 AATCTATCTGCTACAAATTCTATATATTGACACATTAAGTCGCAATTAATTCCTATAAGT 16090
||||| || || |||||||| |||||||| ||||| | | || || || ||||| | |
Sbjct 890854 AATCTGTCCGCAACAAATTCAATATATTGGCACATGAGTTTACAGTTCATGCCTATCATT 890795
Query 16091 CGTACCGGAAGAGCTTTTGTTAAAAATTGTTGTTCTATCACAACCGCTTCTTTAATGATA 16150
|| || | ||| | |||||||||| |||||| || ||||| |||||||| ||
Sbjct 890794 TCAACGGGTAAAGCGTCAGTTAAAAATTCTTGTTCAATTTGGACCGCGTCTTTAATAATT 890735
Query 16151 TCGGTGGCTCGTGTTTCAGACGGTGTATGGTTTAGGTGTTTAAACATTAGACACGCGAAG 16210
||| | ||| | || ||| | || | | |||||||||||||| || || ||
Sbjct 890734 GATGTGACGCGTTCATTCGAAGGTTTCTGTATGATGTGTTTAAACATTAAGCATGCAAAA 890675
Query 16211 TCGCAATGTAGTCC 16224
|||||||| | |||
Sbjct 890674 TCGCAATGCAATCC 890661
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 511238179383120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |