Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Habropoda_20laboriosa_20[refseq_20GCF_5F001263275.1_202015-08-13]
27,566 sequences; 296,954,667 total letters
Query= NC_001611.1
Length=185578
Score E
Sequences producing significant alignments: (Bits) Value
seq59 161 1e-34
seq284 104 3e-17
>seq59
Length=4191719
Score = 161 bits (178), Expect = 1e-34
Identities = 202/275 (73%), Gaps = 4/275 (1%)
Strand=Plus/Minus
Query 53056 CTGAATAGATCCACCATCTACCATAATCCTATTCTTGATCTCATCATTCCATAATTTTCT 53115
||||||||| || || | | ||||| ||| || || || | || ||| | | |||
Sbjct 764808 CTGAATAGAACCGTTATTTGCTATAATTTCATTTTTCATGTCCTGATCCCAAAGATCTCT 764749
Query 53116 CTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAAATTCTCCAGACAATACTCT 53175
|| || | | | | | | ||| |||||||| |||||||| ||||||||||| |||||
Sbjct 764748 TTCAGTAAGATCCCGTAACAAATGAGGATTAACAACTTGAAACTCTCCAGACAAAACTCT 764689
Query 53176 CCGAGTGTAAATATTACTGGTATACGGTTCCACAGACTCATTATTTCCCAAAATTTGAGC 53235
| || ||||||||| | ||||| ||||| | |||||||||||||| |||||||| ||
Sbjct 764688 TCTTGTATAAATATTATTAGTATAGGGTTCTATGGACTCATTATTTCCTAAAATTTGCGC 764629
Query 53236 AGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTAAGACCGTATGTTCTG-- 53293
||| ||||| || ||||||||||| | || ||| |||||||| || ||||| |
Sbjct 764628 AGTAGATGCTGTTGGCATAGGTGCAATTAACAAAGAATTTCTAACTCC--ATGTTTAGCA 764571
Query 53294 ATTTTATCTTTTAGAGGTTCCCAATTCCAAAGATC 53328
||||| || |||| || |||||| ||| | |||
Sbjct 764570 ATTTTTTCCTTTAAAGCAGCCCAATCCCATAAATC 764536
Score = 104 bits (114), Expect = 3e-17
Identities = 202/294 (69%), Gaps = 16/294 (5%)
Strand=Plus/Minus
Query 53585 GCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGGTTTC---TGACAATT 53641
|||||||||| ||||||||||| | ||| |||||||||| | || ||||||||
Sbjct 764153 GCTTCTGGAACTGGATAATAATTGACATCAATAATTTTATCCAAATTATAGGTGACAATT 764094
Query 53642 ACTTTGACCACATCCTTC--AGTTTGAGAAAATCAAA----TTGTC--CATCTATTACAA 53693
|| ||| | ||| ||||| ||||||||| || | || ||||||
Sbjct 764093 ---TTCGTCACCT--TTCGAAGTTTTTCAAAATCAAAAGTTTTATTAGCAGGATTTACAA 764039
Query 53694 ACATGTTCAATGCAATAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATT 53753
|||| |||| ||||| || |||| ||| || || || | |||| | | | || |
Sbjct 764038 ACATATTCACAGCAATTGAAGCCAAATTGCATACAGCAATTTCATCTGGACTGGAGTACT 763979
Query 53754 GTATTATCTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCT 53813
||| || || ||||| | ||| ||||||||||| ||||||| |||||| ||||| |
Sbjct 763978 GTACAATTTCTGTGCATAAATTGCTACACTTGATTGTTCCTATATTTTGATGATTTGATT 763919
Query 53814 TTTTGTTACACGCATCCTTATAAAGAATGAATGGCGTACCAGTTTCAATCTGGG 53867
| || || ||| |||||||| ||| | || || || ||||||| ||||
Sbjct 763918 TACGATTGCAGTGATCTTTATAAAGCATGTAAGGAGTTCCTGTTTCAACTTGGG 763865
Score = 100 bits (110), Expect = 3e-16
Identities = 120/159 (75%), Gaps = 3/159 (2%)
Strand=Plus/Minus
Query 53950 TTCAAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACATCAACGA 54009
|||||| || || |||||||||| || || |||||| |||| | || ||||| || |
Sbjct 763504 TTCAAATTCATCACCCCAAACATCATCTAAACCAGGAGATTCGTGTGGGCACATTAAAGT 763445
Query 54010 CCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATA-A 54068
||| || | ||| |||||||||||||| |||||||||||||| | ||| ||| |
Sbjct 763444 CCAAATACCATTTTCCAAAACTCGTTTCATAAAAAGATCAGGAATCCATAAAGC-ATAGA 763386
Query 54069 ATAGATCTCTGGTTCTATGTTCCTCGTTTCCTG-TATTC 54106
||| ||||| | ||||| ||| || || |||| |||||
Sbjct 763385 ATAATTCTCTTGCTCTATTTTCTTCTTTACCTGTTATTC 763347
Score = 89.7 bits (98), Expect = 6e-13
Identities = 171/250 (68%), Gaps = 4/250 (2%)
Strand=Plus/Minus
Query 54404 CTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAAC 54463
||||||||||| || | |||| | ||| ||| | || || ||||| || |||||
Sbjct 762895 CTAGACATTTGCTGTTGCTTAGTACATGCAGCAAAAAGAGTTGGTGAAGCATGTGTAAAA 762836
Query 54464 CATTTTTCAGAAAGTAGATTGTACGTCTCGATAGCTGAGTCTATATCCCATTGATGAATT 54523
| ||| || | | ||| || || || |||||| ||| ||||| ||| ||
Sbjct 762835 TAACGTTCTGATAAGAAATTATATGTTTCTATAGCTCTGTCAATATCATCACCATGGATA 762776
Query 54524 CCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTC 54583
| ||||| || | ||||||||||||||| || || ||||| | || | ||| ||
Sbjct 762775 GCAACTGCAACTCTCATTAACATGTGCTGTGGCCTCTCAACAACTTTTCCATATATCTTT 762716
Query 54584 AGCAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA--TGAAAAGTCTCGTT 54641
| || ||| | |||| | ||||| ||||||||||| ||||| ||||| |||| |
Sbjct 762715 AATAAATAGCTTCTTTCAAGTGTTTTGAAACCAAAATAATTGTAACTGAAA--TCTCTAT 762658
Query 54642 CGTAAATAAT 54651
| ||||| ||
Sbjct 762657 CATAAATTAT 762648
>seq284
Length=1419496
Score = 104 bits (114), Expect = 3e-17
Identities = 98/125 (78%), Gaps = 0/125 (0%)
Strand=Plus/Minus
Query 24621 TTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATATTC 24680
||||| | || ||||| |||||||||||||| || || ||||| ||||| ||||| | |
Sbjct 889928 TTAGAAAGGTCTACTTCCTCCACTGTCCAAAAGGAGGCTTCTGCTTTTTTGTACATTTGC 889869
Query 24681 CAGATGTCATGATATTGAATTGGAAAAATAACAAATCTATTTGGATTTTTTGCAAGGATT 24740
|| |||||| | |||| || ||||||| |||||||||| |||||||| | || | |
Sbjct 889868 CAAATGTCAGGCCATTGGATAGGAAAAACAACAAATCTACGTGGATTTTCTTTTAGCAGT 889809
Query 24741 GGTTC 24745
|||||
Sbjct 889808 GGTTC 889804
Score = 98.7 bits (108), Expect = 1e-15
Identities = 151/214 (71%), Gaps = 6/214 (3%)
Strand=Plus/Minus
Query 23949 CCCAATTCAGAAATCAATCTATCTGCGACAAACTCCATATATGTTTTCATCATTTCACAA 24008
|| ||||| || |||||| || || ||||| || |||||| ||| | || |||
Sbjct 890869 CCTAATTCTACAAGCAATCTGTCCGCAACAAATTCAATATATTGGCACATGAGTTTACAG 890810
Query 24009 TTCATTCCTATAAGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACC 24068
||||| ||||| | || ||| || | ||| |||| | ||||||||||||||| ||||
Sbjct 890809 TTCATGCCTATCATTTCAACGGGTAAAGCGTCAGTTAAAAATTCTTGTTCAATTTGGACC 890750
Query 24069 GCGTCTGTTATAATAGATCTTACTGTTTCTTCACTCGGTGGATAC---AATAAATGTTTA 24125
|||||| | ||||| ||| | || |||| ||| || | | | | ||||||
Sbjct 890749 GCGTCTTTAATAATTGATGTGAC---GCGTTCATTCGAAGGTTTCTGTATGATGTGTTTA 890693
Query 24126 AACATCAAACATGCGAAATCGCAGTGTAGACCCT 24159
||||| || ||||| |||||||| || | ||||
Sbjct 890692 AACATTAAGCATGCAAAATCGCAATGCAATCCCT 890659
Score = 89.7 bits (98), Expect = 6e-13
Identities = 104/138 (75%), Gaps = 3/138 (2%)
Strand=Plus/Minus
Query 23789 TTAAAAGTCAACATCTAAAGAAAAATGATTGTCT-TCTTGA--GACATAACTCCCATTTT 23845
|||||||||| ||| | | ||||| | ||| | ||| | ||| |||||| |||
Sbjct 891104 TTAAAAGTCAGCATTAACTGTAAAATTGCTCTCTATTTTGTTTGCCATCACTCCCCATTT 891045
Query 23846 TTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTACCTTCTAATGATATATTTTC 23905
||| ||||| || || ||| |||||||| || || |||||||| || || |||| |||
Sbjct 891044 TTGATATTCTCCAACTTTTTTCTCGAAAAAGTTCGTCTTACCTTCCAAAGAAATATGTTC 890985
Query 23906 CATGAAATCGGATGGATT 23923
|||||||||| |||||||
Sbjct 890984 CATGAAATCGAATGGATT 890967
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 593517018379680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |