Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Habropoda_20laboriosa_20[refseq_20GCF_5F001263275.1_202015-08-13]
27,566 sequences; 296,954,667 total letters
Query= NC_001623.1
Length=133894
Score E
Sequences producing significant alignments: (Bits) Value
seq49 98.7 9e-16
seq394 87.8 2e-12
seq68 84.2 2e-11
seq65 82.4 7e-11
>seq49
Length=1886280
Score = 98.7 bits (108), Expect = 9e-16
Identities = 158/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 28962 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 29021
||||| || || |||| |||||||| |||||||| || ||| ||| ||| | |
Sbjct 1163141 ATGCAGATCTTTGTCAAGACATTGACTGGCAAAACAATAACCCTCGAGGTTGAAGCATCC 1163082
Query 29022 GAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 29081
|| || | | || | ||| ||||||| || || || || | ||| ||||||
Sbjct 1163081 GATACAATTGAAAATGTGAAGGCAAAAATTCAGGACAAGGAGGGAATTCCCCCAGATCAG 1163022
Query 29082 CAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGATTACAAT 29141
|||||| | || ||||| ||||||||||| |||||| | ||| | | ||||||||
Sbjct 1163021 CAAAGATTGATTTTTGCTGGCAAACAACTTGAAGATGGAAGAACACTCTCTGATTACAAC 1162962
Query 29142 ATTCAGAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 29188
||||| || || || || |||||| | || | ||||| |||| ||
Sbjct 1162961 ATTCAAAAAGAGTCAACACTTCACCTTGTACTTCGATTGAGAGGTGG 1162915
Score = 82.4 bits (90), Expect = 7e-11
Identities = 155/228 (68%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 28961 AATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGC 29020
||||||||| ||| ||||||| | ||||| ||||| ||||| ||| ||| | |
Sbjct 1162458 AATGCAAATTTTCGTCAAAACCCTTACGGGAAAAACTATTACTTTAGAAGTTGAAGCTTC 1162399
Query 29021 AGAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCA 29080
|| ||| | | || | ||| ||||||| || || |||||| | || |||||
Sbjct 1162398 TGATACGATTGAGAATGTGAAGGCAAAAATTCAGGACAAGGAAGGTATTCCACCTGATCA 1162339
Query 29081 ACAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGATTACAA 29140
||| ||| | || || || || || || || ||||| || | || || || ||
Sbjct 1162338 ACAGAGATTGATTTTCGCTGGAAAGCAGCTTGAAGACGGACGCACACTTGCAGACTATAA 1162279
Query 29141 TATTCAGAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 29188
||||||||||||||| ||||| || | || | ||| | ||||| ||
Sbjct 1162278 TATTCAGAAGGAATCAACTCTCCATCTTGTACTTCGACTCCGAGGTGG 1162231
>seq394
Length=4544675
Score = 87.8 bits (96), Expect = 2e-12
Identities = 87/113 (77%), Gaps = 0/113 (0%)
Strand=Plus/Plus
Query 29076 GATCAACAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGAT 29135
||||| || ||| | |||||||| ||||||||| | |||||| | |||| | | |||
Sbjct 4399695 GATCAGCAGAGATTAATCTTTGCTGGCAAACAATTAGAAGATGGTAGAACTTTATCAGAT 4399754
Query 29136 TACAATATTCAGAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 29188
|| || ||||||||||||||||| | || |||| ||||| ||| |||| ||
Sbjct 4399755 TATAACATTCAGAAGGAATCTACATTACATTTGGTATTACGTTTAAGAGGTGG 4399807
>seq68
Length=1848670
Score = 84.2 bits (92), Expect = 2e-11
Identities = 133/191 (70%), Gaps = 0/191 (0%)
Strand=Plus/Minus
Query 28959 AAAATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCC 29018
|||||||| |||||| | ||||| |||||||| |||||||||||| ||| |||| |
Sbjct 813114 AAAATGCAGATATTCGTGAAAACTTTGACGGGTAAAACCATTACCCTTGAAGTGGAAGCA 813055
Query 29019 GCAGAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGAT 29078
| || || | | || | || ||||||| ||||||||||| | || |||
Sbjct 813054 TCGGATACTATTGAAAATGTGAAAGCAAAAATTCAGGATAAAGAAGGAATTCCACCCGAT 812995
Query 29079 CAACAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGATTAC 29138
|| ||| | || || ||||| || ||||| | |||||| ||| || | |||||
Sbjct 812994 CAGCAACGTCTCATTTTTGCTGGAAAACAGTTAGAAGATGGACGTACTCTGTCAGATTAT 812935
Query 29139 AATATTCAGAA 29149
|| ||||| ||
Sbjct 812934 AACATTCAAAA 812924
>seq65
Length=771584
Score = 82.4 bits (90), Expect = 7e-11
Identities = 155/228 (68%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 28961 AATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGC 29020
|||||| || ||| | || || ||||||| |||||||| || |||| || | |
Sbjct 537125 AATGCAGATCTTCGTTAAGACGCTGACGGGGAAAACCATCACACTCGAAGTTGAGGCTTC 537184
Query 29021 AGAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCA 29080
||| || | | | ||||| || ||| || ||||||||| | || || ||
Sbjct 537185 AGACACAATAGAAAACGTTAAGGCCAAGATTCAAGACAAAGAAGGTATCCCTCCCGACCA 537244
Query 29081 ACAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGATTACAA 29140
|| | | |||||||| ||||||||| |||||||| || | | ||||||||
Sbjct 537245 GCAGCGTTTGATCTTTGCTGGCAAACAATTGGAAGATGGGCGCACCCTTTCAGATTACAA 537304
Query 29141 TATTCAGAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 29188
||| || || || || || || ||| ||||||| ||| | ||||||||
Sbjct 537305 TATCCAAAAAGAGTCCACACTGCACTTGGTGTTGCGACTCCGAGGAGG 537352
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 428192095969730
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |