Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Habropoda_20laboriosa_20[refseq_20GCF_5F001263275.1_202015-08-13] 27,566 sequences; 296,954,667 total letters Query= NC_001623.1 Length=133894 Score E Sequences producing significant alignments: (Bits) Value seq49 98.7 9e-16 seq394 87.8 2e-12 seq68 84.2 2e-11 seq65 82.4 7e-11 >seq49 Length=1886280 Score = 98.7 bits (108), Expect = 9e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 28962 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 29021 ||||| || || |||| |||||||| |||||||| || ||| ||| ||| | | Sbjct 1163141 ATGCAGATCTTTGTCAAGACATTGACTGGCAAAACAATAACCCTCGAGGTTGAAGCATCC 1163082 Query 29022 GAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 29081 || || | | || | ||| ||||||| || || || || | ||| |||||| Sbjct 1163081 GATACAATTGAAAATGTGAAGGCAAAAATTCAGGACAAGGAGGGAATTCCCCCAGATCAG 1163022 Query 29082 CAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGATTACAAT 29141 |||||| | || ||||| ||||||||||| |||||| | ||| | | |||||||| Sbjct 1163021 CAAAGATTGATTTTTGCTGGCAAACAACTTGAAGATGGAAGAACACTCTCTGATTACAAC 1162962 Query 29142 ATTCAGAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 29188 ||||| || || || || |||||| | || | ||||| |||| || Sbjct 1162961 ATTCAAAAAGAGTCAACACTTCACCTTGTACTTCGATTGAGAGGTGG 1162915 Score = 82.4 bits (90), Expect = 7e-11 Identities = 155/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 28961 AATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGC 29020 ||||||||| ||| ||||||| | ||||| ||||| ||||| ||| ||| | | Sbjct 1162458 AATGCAAATTTTCGTCAAAACCCTTACGGGAAAAACTATTACTTTAGAAGTTGAAGCTTC 1162399 Query 29021 AGAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCA 29080 || ||| | | || | ||| ||||||| || || |||||| | || ||||| Sbjct 1162398 TGATACGATTGAGAATGTGAAGGCAAAAATTCAGGACAAGGAAGGTATTCCACCTGATCA 1162339 Query 29081 ACAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGATTACAA 29140 ||| ||| | || || || || || || || ||||| || | || || || || Sbjct 1162338 ACAGAGATTGATTTTCGCTGGAAAGCAGCTTGAAGACGGACGCACACTTGCAGACTATAA 1162279 Query 29141 TATTCAGAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 29188 ||||||||||||||| ||||| || | || | ||| | ||||| || Sbjct 1162278 TATTCAGAAGGAATCAACTCTCCATCTTGTACTTCGACTCCGAGGTGG 1162231 >seq394 Length=4544675 Score = 87.8 bits (96), Expect = 2e-12 Identities = 87/113 (77%), Gaps = 0/113 (0%) Strand=Plus/Plus Query 29076 GATCAACAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGAT 29135 ||||| || ||| | |||||||| ||||||||| | |||||| | |||| | | ||| Sbjct 4399695 GATCAGCAGAGATTAATCTTTGCTGGCAAACAATTAGAAGATGGTAGAACTTTATCAGAT 4399754 Query 29136 TACAATATTCAGAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 29188 || || ||||||||||||||||| | || |||| ||||| ||| |||| || Sbjct 4399755 TATAACATTCAGAAGGAATCTACATTACATTTGGTATTACGTTTAAGAGGTGG 4399807 >seq68 Length=1848670 Score = 84.2 bits (92), Expect = 2e-11 Identities = 133/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 28959 AAAATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCC 29018 |||||||| |||||| | ||||| |||||||| |||||||||||| ||| |||| | Sbjct 813114 AAAATGCAGATATTCGTGAAAACTTTGACGGGTAAAACCATTACCCTTGAAGTGGAAGCA 813055 Query 29019 GCAGAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGAT 29078 | || || | | || | || ||||||| ||||||||||| | || ||| Sbjct 813054 TCGGATACTATTGAAAATGTGAAAGCAAAAATTCAGGATAAAGAAGGAATTCCACCCGAT 812995 Query 29079 CAACAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGATTAC 29138 || ||| | || || ||||| || ||||| | |||||| ||| || | ||||| Sbjct 812994 CAGCAACGTCTCATTTTTGCTGGAAAACAGTTAGAAGATGGACGTACTCTGTCAGATTAT 812935 Query 29139 AATATTCAGAA 29149 || ||||| || Sbjct 812934 AACATTCAAAA 812924 >seq65 Length=771584 Score = 82.4 bits (90), Expect = 7e-11 Identities = 155/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 28961 AATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGC 29020 |||||| || ||| | || || ||||||| |||||||| || |||| || | | Sbjct 537125 AATGCAGATCTTCGTTAAGACGCTGACGGGGAAAACCATCACACTCGAAGTTGAGGCTTC 537184 Query 29021 AGAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCA 29080 ||| || | | | ||||| || ||| || ||||||||| | || || || Sbjct 537185 AGACACAATAGAAAACGTTAAGGCCAAGATTCAAGACAAAGAAGGTATCCCTCCCGACCA 537244 Query 29081 ACAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGATTACAA 29140 || | | |||||||| ||||||||| |||||||| || | | |||||||| Sbjct 537245 GCAGCGTTTGATCTTTGCTGGCAAACAATTGGAAGATGGGCGCACCCTTTCAGATTACAA 537304 Query 29141 TATTCAGAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 29188 ||| || || || || || || ||| ||||||| ||| | |||||||| Sbjct 537305 TATCCAAAAAGAGTCCACACTGCACTTGGTGTTGCGACTCCGAGGAGG 537352 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 428192095969730