Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Habropoda_20laboriosa_20[refseq_20GCF_5F001263275.1_202015-08-13]
27,566 sequences; 296,954,667 total letters
Query= NC_001875.2
Length=131995
Score E
Sequences producing significant alignments: (Bits) Value
seq49 86.0 5e-12
seq65 82.4 6e-11
>seq49
Length=1886280
Score = 86.0 bits (94), Expect = 5e-12
Identities = 157/230 (68%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 20947 TTCCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCG 21006
|||| ||||| || | || || | ||| | ||| |||||||||||||||||||||||||
Sbjct 1161327 TTCCTCCTCGGAGTCGCAGAACGAGATGAAGAGTTGACTCCTTTTGAATGTTATAGTCCG 1161386
Query 21007 CCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGG 21066
|| || | | || || || || || || || |||| | ||| || ||||| |
Sbjct 1161387 AAAGTGTGCGTCCATCTTCAAGTTGCTTACCAGCGAAAATCAATCTTTGTTGGTCTGGTG 1161446
Query 21067 GCACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCG 21126
| | ||| |||||||| || ||| ||||| | | | |||||| | ||
Sbjct 1161447 GAATGCCCTCCTTGTCCTGAATTTTTGCCTTCACATTCTCAATCGTATCAGAAGCTTCAA 1161506
Query 21127 TTTCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCATT 21176
||| | ||||| || || || || | |||||||| || |||||||||
Sbjct 1161507 CTTCTAAAGTAATAGTTTTTCCAGTAAGGGTTTTGACGAAAATTTGCATT 1161556
Score = 82.4 bits (90), Expect = 6e-11
Identities = 156/230 (68%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 20947 TTCCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCG 21006
|||| ||||| || | || || | ||| | ||| |||||||||||||| |||||||| |
Sbjct 1161099 TTCCTCCTCGGAGTCGAAGTACAAGATGGAGAGTTGACTCCTTTTGAATATTATAGTCAG 1161158
Query 21007 CCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGG 21066
|| || | | || || || || || || || |||| | ||| ||||| || ||
Sbjct 1161159 AAAGTGTGCGTCCATCTTCAAGTTGCTTACCAGCGAAAATCAATCTTTGCTGATCTGGGG 1161218
Query 21067 GCACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCG 21126
| | ||| |||||||| || ||| ||||| | | | |||||| | ||
Sbjct 1161219 GAATGCCCTCCTTGTCCTGAATTTTTGCCTTCACATTCTCAATCGTATCAGAAGCTTCAA 1161278
Query 21127 TTTCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCATT 21176
||| | ||||| || || || || | |||||||| || |||||||||
Sbjct 1161279 CTTCTAAAGTAATAGTTTTTCCAGTAAGGGTTTTGACGAAAATTTGCATT 1161328
Score = 82.4 bits (90), Expect = 6e-11
Identities = 156/230 (68%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 20947 TTCCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCG 21006
|||| ||||| || | || || | ||| | ||| || ||||| ||||| |||||||| |
Sbjct 1162229 TTCCACCTCGGAGTCGAAGTACAAGATGGAGAGTTGATTCCTTCTGAATATTATAGTCTG 1162288
Query 21007 CCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGG 21066
| || || | |||| || ||||| || || || |||| | |||||| || || |
Sbjct 1162289 CAAGTGTGCGTCCGTCTTCAAGCTGCTTTCCAGCGAAAATCAATCTCTGTTGATCAGGTG 1162348
Query 21067 GCACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCG 21126
| | ||||||||||| || ||| ||||| | | | |||||| | ||
Sbjct 1162349 GAATACCTTCCTTGTCCTGAATTTTTGCCTTCACATTCTCAATCGTATCAGAAGCTTCAA 1162408
Query 21127 TTTCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCATT 21176
||| | ||||| || || || || | |||||||| || |||||||||
Sbjct 1162409 CTTCTAAAGTAATAGTTTTTCCCGTAAGGGTTTTGACGAAAATTTGCATT 1162458
>seq65
Length=771584
Score = 82.4 bits (90), Expect = 6e-11
Identities = 156/230 (68%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 20947 TTCCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCG 21006
|||| ||||| || | | ||||| |||| |||||||||||||| ||||| || || |
Sbjct 538722 TTCCTCCTCGGAGTCGCAACACCAAGTGCAGTGTGGACTCCTTTTGGATGTTGTAATCTG 538663
Query 21007 CCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGG 21066
|| || | | || |||| ||| || || ||| | || || | ||||||||| |
Sbjct 538662 AAAGAGTGCGTCCATCTTCCAACTGCTTCCCAGCAAAGATCAGACGCTGCTGGTCAGAAG 538603
Query 21067 GCACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCG 21126
| | ||||| ||||| |||| || ||| || | | | || || | |||
Sbjct 538602 GGATTCCTTCTTTGTCTACGATTTTGGCTTTAACGTTCTCTATTGTGTCTGAAGCCTCAA 538543
Query 21127 TTTCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCATT 21176
||||| ||| ||||| || || || | ||| ||||| || || ||||||
Sbjct 538542 CTTCCAGGGTGATGGTTTTCCCCGTGAGCGTCTTGACGAAGATCTGCATT 538493
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 422117337535256
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |