Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Habropoda_20laboriosa_20[refseq_20GCF_5F001263275.1_202015-08-13] 27,566 sequences; 296,954,667 total letters Query= NC_001875.2 Length=131995 Score E Sequences producing significant alignments: (Bits) Value seq49 86.0 5e-12 seq65 82.4 6e-11 >seq49 Length=1886280 Score = 86.0 bits (94), Expect = 5e-12 Identities = 157/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 20947 TTCCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCG 21006 |||| ||||| || | || || | ||| | ||| ||||||||||||||||||||||||| Sbjct 1161327 TTCCTCCTCGGAGTCGCAGAACGAGATGAAGAGTTGACTCCTTTTGAATGTTATAGTCCG 1161386 Query 21007 CCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGG 21066 || || | | || || || || || || || |||| | ||| || ||||| | Sbjct 1161387 AAAGTGTGCGTCCATCTTCAAGTTGCTTACCAGCGAAAATCAATCTTTGTTGGTCTGGTG 1161446 Query 21067 GCACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCG 21126 | | ||| |||||||| || ||| ||||| | | | |||||| | || Sbjct 1161447 GAATGCCCTCCTTGTCCTGAATTTTTGCCTTCACATTCTCAATCGTATCAGAAGCTTCAA 1161506 Query 21127 TTTCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCATT 21176 ||| | ||||| || || || || | |||||||| || ||||||||| Sbjct 1161507 CTTCTAAAGTAATAGTTTTTCCAGTAAGGGTTTTGACGAAAATTTGCATT 1161556 Score = 82.4 bits (90), Expect = 6e-11 Identities = 156/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 20947 TTCCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCG 21006 |||| ||||| || | || || | ||| | ||| |||||||||||||| |||||||| | Sbjct 1161099 TTCCTCCTCGGAGTCGAAGTACAAGATGGAGAGTTGACTCCTTTTGAATATTATAGTCAG 1161158 Query 21007 CCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGG 21066 || || | | || || || || || || || |||| | ||| ||||| || || Sbjct 1161159 AAAGTGTGCGTCCATCTTCAAGTTGCTTACCAGCGAAAATCAATCTTTGCTGATCTGGGG 1161218 Query 21067 GCACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCG 21126 | | ||| |||||||| || ||| ||||| | | | |||||| | || Sbjct 1161219 GAATGCCCTCCTTGTCCTGAATTTTTGCCTTCACATTCTCAATCGTATCAGAAGCTTCAA 1161278 Query 21127 TTTCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCATT 21176 ||| | ||||| || || || || | |||||||| || ||||||||| Sbjct 1161279 CTTCTAAAGTAATAGTTTTTCCAGTAAGGGTTTTGACGAAAATTTGCATT 1161328 Score = 82.4 bits (90), Expect = 6e-11 Identities = 156/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 20947 TTCCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCG 21006 |||| ||||| || | || || | ||| | ||| || ||||| ||||| |||||||| | Sbjct 1162229 TTCCACCTCGGAGTCGAAGTACAAGATGGAGAGTTGATTCCTTCTGAATATTATAGTCTG 1162288 Query 21007 CCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGG 21066 | || || | |||| || ||||| || || || |||| | |||||| || || | Sbjct 1162289 CAAGTGTGCGTCCGTCTTCAAGCTGCTTTCCAGCGAAAATCAATCTCTGTTGATCAGGTG 1162348 Query 21067 GCACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCG 21126 | | ||||||||||| || ||| ||||| | | | |||||| | || Sbjct 1162349 GAATACCTTCCTTGTCCTGAATTTTTGCCTTCACATTCTCAATCGTATCAGAAGCTTCAA 1162408 Query 21127 TTTCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCATT 21176 ||| | ||||| || || || || | |||||||| || ||||||||| Sbjct 1162409 CTTCTAAAGTAATAGTTTTTCCCGTAAGGGTTTTGACGAAAATTTGCATT 1162458 >seq65 Length=771584 Score = 82.4 bits (90), Expect = 6e-11 Identities = 156/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 20947 TTCCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCG 21006 |||| ||||| || | | ||||| |||| |||||||||||||| ||||| || || | Sbjct 538722 TTCCTCCTCGGAGTCGCAACACCAAGTGCAGTGTGGACTCCTTTTGGATGTTGTAATCTG 538663 Query 21007 CCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGG 21066 || || | | || |||| ||| || || ||| | || || | ||||||||| | Sbjct 538662 AAAGAGTGCGTCCATCTTCCAACTGCTTCCCAGCAAAGATCAGACGCTGCTGGTCAGAAG 538603 Query 21067 GCACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCG 21126 | | ||||| ||||| |||| || ||| || | | | || || | ||| Sbjct 538602 GGATTCCTTCTTTGTCTACGATTTTGGCTTTAACGTTCTCTATTGTGTCTGAAGCCTCAA 538543 Query 21127 TTTCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCATT 21176 ||||| ||| ||||| || || || | ||| ||||| || || |||||| Sbjct 538542 CTTCCAGGGTGATGGTTTTCCCCGTGAGCGTCTTGACGAAGATCTGCATT 538493 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 422117337535256