Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Habropoda_20laboriosa_20[refseq_20GCF_5F001263275.1_202015-08-13]
27,566 sequences; 296,954,667 total letters
Query= NC_002188.1
Length=288539
Score E
Sequences producing significant alignments: (Bits) Value
seq148 120 6e-22
seq28 120 6e-22
>seq148
Length=2826987
Score = 120 bits (132), Expect = 6e-22
Identities = 163/225 (72%), Gaps = 2/225 (1%)
Strand=Plus/Plus
Query 135610 GAGTGGACTACGTGGaaaaaaaTACCCGATCCTGTTTTGCATATAGAACTTAGGAGA-TG 135668
|||||| || | ||| || | | | ||||||||| |||||||| || ||||| | ||
Sbjct 1459178 GAGTGGGCTGCCTGGCAAGATAGAGGCGATCCTGTGTTGCATATTGA-CTTAGTTAAGTG 1459236
Query 135669 GGCGGATGTTTTTATTATAGCGCCCTTAACGGCAAATACGTTAGCAAAAATAGCTAATGG 135728
||| ||| | ||| | || || || ||| || || || | | || ||||| | |||
Sbjct 1459237 GGCTGATTTATTTTTAATTGCTCCATTAGATGCTAACACCCTTGGCAAGATAGCCAGTGG 1459296
Query 135729 TATATGCGATAATTTACTGACGTCTATTGTAAGAGCCTGGGATACAAACAAACCACTCAT 135788
||||||||||||| || |||| | | | | | | ||||||||| | ||||| | ||
Sbjct 1459297 TATATGCGATAATATATTGACCTGTGTCGCACGTGCCTGGGATCCTTCAAAACCTTTGAT 1459356
Query 135789 TTTCTGTCCTGCAATGAATACTCTTATGTGGGAACATCCTATTAC 135833
||||||||||| |||||||| |||||||||||||| ||||
Sbjct 1459357 CTTCTGTCCTGCTATGAATACAAAAATGTGGGAACATCCAGTTAC 1459401
>seq28
Length=2648693
Score = 120 bits (132), Expect = 6e-22
Identities = 167/234 (71%), Gaps = 0/234 (0%)
Strand=Plus/Minus
Query 189395 AGAAAGTATATATATTCCATTAAACAACTCGAAAAAGCGGAAACTCATGATCCTCTATGG 189454
|| || || |||||||| | || ||| | ||| | | || ||||||||| | |||||
Sbjct 1050873 AGGAAATACATATATTCTTTAAATCAATTAGAAGACTCTGAGACTCATGATGATTTATGG 1050814
Query 189455 AACGCGTCACAAATGCAGATGGTGAGAGAAGGAAAAATGCATAGTTTTTTACGAATGTAT 189514
|| || | ||| || ||||| | |||||| |||||| | || ||| ||||||||
Sbjct 1050813 AATGCATGTCAATATCAAATGGTTGCAATAGGAAAGATGCATGGATTCTTAAGAATGTAT 1050754
Query 189515 TGGGCTAAGAAGATACTTGAATGGACTAGAACACCTGAAGACGCTTTGAGTTATAGTATC 189574
||||| ||||| ||| | ||||||||| ||||||||||| ||||||| | |
Sbjct 1050753 TGGGCAAAGAAAATATTAGAATGGACTGAAACACCTGAAGTTGCTTTGAAGTGGGCCAAT 1050694
Query 189575 TATTTGAACAACAAGTACGAACTAGACGGCACGGATCCTAACGGATACGTAGGT 189628
||||| || || |||||| |||| || |||||||| || || ||||||
Sbjct 1050693 TATTTAAATAATAAGTACAGTATAGATGGTTGTGATCCTAATGGTTATGTAGGT 1050640
Score = 95.1 bits (104), Expect = 2e-14
Identities = 94/122 (77%), Gaps = 0/122 (0%)
Strand=Plus/Minus
Query 189624 TAGGTTGTATGTGGTCTATTTGCGGATTACACGATAGAGCGTGGAAAGAAAGACCGATAT 189683
||||||||||||||||||| ||||| |||| ||| | |||| |||||| ||||
Sbjct 1050573 TAGGTTGTATGTGGTCTATATGCGGTGTACATGATCAGGGTTGGAGAGAAAGGGAAATAT 1050514
Query 189684 TTGGAAAGATAAGATATATGAATTATGAGAGTTCTAAGAAGAAATTTGATGTTGCTGTAT 189743
||||||| |||||||| ||||||||||| | | ||| | |||||| | |||| | ||
Sbjct 1050513 TTGGAAAAATAAGATACATGAATTATGAAGGATGTAAAAGAAAATTTAACATTGCCGAAT 1050454
Query 189744 TT 189745
||
Sbjct 1050453 TT 1050452
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 922878689462640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |