Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Habropoda_20laboriosa_20[refseq_20GCF_5F001263275.1_202015-08-13] 27,566 sequences; 296,954,667 total letters Query= NC_002188.1 Length=288539 Score E Sequences producing significant alignments: (Bits) Value seq148 120 6e-22 seq28 120 6e-22 >seq148 Length=2826987 Score = 120 bits (132), Expect = 6e-22 Identities = 163/225 (72%), Gaps = 2/225 (1%) Strand=Plus/Plus Query 135610 GAGTGGACTACGTGGaaaaaaaTACCCGATCCTGTTTTGCATATAGAACTTAGGAGA-TG 135668 |||||| || | ||| || | | | ||||||||| |||||||| || ||||| | || Sbjct 1459178 GAGTGGGCTGCCTGGCAAGATAGAGGCGATCCTGTGTTGCATATTGA-CTTAGTTAAGTG 1459236 Query 135669 GGCGGATGTTTTTATTATAGCGCCCTTAACGGCAAATACGTTAGCAAAAATAGCTAATGG 135728 ||| ||| | ||| | || || || ||| || || || | | || ||||| | ||| Sbjct 1459237 GGCTGATTTATTTTTAATTGCTCCATTAGATGCTAACACCCTTGGCAAGATAGCCAGTGG 1459296 Query 135729 TATATGCGATAATTTACTGACGTCTATTGTAAGAGCCTGGGATACAAACAAACCACTCAT 135788 ||||||||||||| || |||| | | | | | | ||||||||| | ||||| | || Sbjct 1459297 TATATGCGATAATATATTGACCTGTGTCGCACGTGCCTGGGATCCTTCAAAACCTTTGAT 1459356 Query 135789 TTTCTGTCCTGCAATGAATACTCTTATGTGGGAACATCCTATTAC 135833 ||||||||||| |||||||| |||||||||||||| |||| Sbjct 1459357 CTTCTGTCCTGCTATGAATACAAAAATGTGGGAACATCCAGTTAC 1459401 >seq28 Length=2648693 Score = 120 bits (132), Expect = 6e-22 Identities = 167/234 (71%), Gaps = 0/234 (0%) Strand=Plus/Minus Query 189395 AGAAAGTATATATATTCCATTAAACAACTCGAAAAAGCGGAAACTCATGATCCTCTATGG 189454 || || || |||||||| | || ||| | ||| | | || ||||||||| | ||||| Sbjct 1050873 AGGAAATACATATATTCTTTAAATCAATTAGAAGACTCTGAGACTCATGATGATTTATGG 1050814 Query 189455 AACGCGTCACAAATGCAGATGGTGAGAGAAGGAAAAATGCATAGTTTTTTACGAATGTAT 189514 || || | ||| || ||||| | |||||| |||||| | || ||| |||||||| Sbjct 1050813 AATGCATGTCAATATCAAATGGTTGCAATAGGAAAGATGCATGGATTCTTAAGAATGTAT 1050754 Query 189515 TGGGCTAAGAAGATACTTGAATGGACTAGAACACCTGAAGACGCTTTGAGTTATAGTATC 189574 ||||| ||||| ||| | ||||||||| ||||||||||| ||||||| | | Sbjct 1050753 TGGGCAAAGAAAATATTAGAATGGACTGAAACACCTGAAGTTGCTTTGAAGTGGGCCAAT 1050694 Query 189575 TATTTGAACAACAAGTACGAACTAGACGGCACGGATCCTAACGGATACGTAGGT 189628 ||||| || || |||||| |||| || |||||||| || || |||||| Sbjct 1050693 TATTTAAATAATAAGTACAGTATAGATGGTTGTGATCCTAATGGTTATGTAGGT 1050640 Score = 95.1 bits (104), Expect = 2e-14 Identities = 94/122 (77%), Gaps = 0/122 (0%) Strand=Plus/Minus Query 189624 TAGGTTGTATGTGGTCTATTTGCGGATTACACGATAGAGCGTGGAAAGAAAGACCGATAT 189683 ||||||||||||||||||| ||||| |||| ||| | |||| |||||| |||| Sbjct 1050573 TAGGTTGTATGTGGTCTATATGCGGTGTACATGATCAGGGTTGGAGAGAAAGGGAAATAT 1050514 Query 189684 TTGGAAAGATAAGATATATGAATTATGAGAGTTCTAAGAAGAAATTTGATGTTGCTGTAT 189743 ||||||| |||||||| ||||||||||| | | ||| | |||||| | |||| | || Sbjct 1050513 TTGGAAAAATAAGATACATGAATTATGAAGGATGTAAAAGAAAATTTAACATTGCCGAAT 1050454 Query 189744 TT 189745 || Sbjct 1050453 TT 1050452 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 922878689462640