Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Habropoda_20laboriosa_20[refseq_20GCF_5F001263275.1_202015-08-13]
27,566 sequences; 296,954,667 total letters
Query= NC_002331.1
Length=178733
Score E
Sequences producing significant alignments: (Bits) Value
seq65 129 7e-25
seq5506 107 2e-18
seq3373 107 2e-18
seq234 107 2e-18
seq139 107 2e-18
seq1079 104 3e-17
seq154 104 3e-17
seq4063 98.7 1e-15
seq826 98.7 1e-15
seq314 98.7 1e-15
seq178 98.7 1e-15
seq49 91.5 2e-13
seq24967 86.0 7e-12
>seq65
Length=771584
Score = 129 bits (142), Expect = 7e-25
Identities = 166/229 (72%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 42956 TCCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 43015
|||||||| | ||||||||||| |||| |||| ||||||||| || |||||||| |
Sbjct 538721 TCCTCCTCGGAGTCGCAACACCAAGTGCAGTGTGGACTCCTTTTGGATGTTGTAATCTGA 538662
Query 43016 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGG 43075
||||| || | || || | |||||| ||||| || || || ||||||||||| | ||
Sbjct 538661 AAGAGTGCGTCCATCTTCCAACTGCTTCCCAGCAAAGATCAGACGCTGCTGGTCAGAAGG 538602
Query 43076 CACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCAC 43135
| | || ||||| | |||||| ||| | || | | ||||| | || ||
Sbjct 538601 GATTCCTTCTTTGTCTACGATTTTGGCTTTAACGTTCTCTATTGTGTCTGAAGCCTCAAC 538542
Query 43136 ATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATT 43184
|| | ||||||||||| ||||| |||||||| || ||||| ||||||
Sbjct 538541 TTCCAGGGTGATGGTTTTCCCCGTGAGCGTCTTGACGAAGATCTGCATT 538493
Score = 120 bits (132), Expect = 3e-22
Identities = 166/230 (72%), Gaps = 2/230 (1%)
Strand=Plus/Minus
Query 42956 TCCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 43015
|||||||| | ||||||||||| |||| ||| ||||||||| ||||||||||| |
Sbjct 537125 TCCTCCTCGGAGTCGCAACACCAAGTGCAGGGTGGACTCCTTTTGGATATTGTAATCTGA 537066
Query 43016 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGG 43075
|| || ||| | || || | ||| |||||||| || || | ||||||||||||| ||
Sbjct 537065 AAGTGTGCGCCCATCTTCCAACTGTTTACCAGCAAAGATCAAACGCTGCTGGTCGGGAGG 537006
Query 43076 CACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCG-TCGCCACCGTGTCGCTCGATTCCA 43134
| | || |||| | ||| | || | | | || || | | ||||| | || |
Sbjct 537005 GATTCCTTCTTTGT-CTTGAATCTTGGCCTTAACGTTCTCTATTGTGTCTGAAGCCTCAA 536947
Query 43135 CATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATT 43184
| |||| ||||||||||| || || |||||||| || ||||| ||||||
Sbjct 536946 CTTCGAGTGTGATGGTTTTCCCTGTGAGCGTCTTGACGAAGATCTGCATT 536897
Score = 120 bits (132), Expect = 3e-22
Identities = 166/230 (72%), Gaps = 2/230 (1%)
Strand=Plus/Minus
Query 42956 TCCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 43015
|||||||| | ||||||||||| |||| |||| ||| ||||| || |||||||| |
Sbjct 537581 TCCTCCTCGGAGTCGCAACACCAAGTGCAGTGTGGACTCTTTTTGGATGTTGTAATCTGA 537522
Query 43016 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGG 43075
||||| ||| | || || | ||| || ||||| || || | ||||||||||||| ||
Sbjct 537521 AAGAGTGCGCCCATCTTCCAACTGTTTGCCAGCAAAGATTAAACGCTGCTGGTCGGGAGG 537462
Query 43076 CACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCG-TCGCCACCGTGTCGCTCGATTCCA 43134
| | || |||| | ||| | || | | | || || | | ||||| | ||| |
Sbjct 537461 GATTCCTTCTTTGT-CTTGAATCTTGGCCTTAACGTTCTCTATTGTGTCTGAGGCTTCTA 537403
Query 43135 CATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATT 43184
| || | ||||||||||| || || |||||||| |||||||| ||||||
Sbjct 537402 CCTCCAAGGTGATGGTTTTCCCTGTGAGCGTCTTGACAAAGATCTGCATT 537353
Score = 120 bits (132), Expect = 3e-22
Identities = 166/230 (72%), Gaps = 2/230 (1%)
Strand=Plus/Minus
Query 42956 TCCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 43015
|||||||| | |||||||||||||||| ||| |||||||| || || ||||| |
Sbjct 537809 TCCTCCTCGGAGTCGCAACACCAAATGCAGGGTGGATTCCTTTTGGATGTTATAATCTGA 537750
Query 43016 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGG 43075
||||| ||| | || |||| ||| || ||||| || || | ||||||||||||| ||
Sbjct 537749 AAGAGTGCGCCCATCTTCTAACTGTTTGCCAGCAAAGATCAAACGCTGCTGGTCGGGAGG 537690
Query 43076 CACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCG-TCGCCACCGTGTCGCTCGATTCCA 43134
| | || |||| | ||| | || | | | || || | | ||||| | ||| |
Sbjct 537689 GATTCCTTCTTTGT-CTTGAATCTTGGCCTTAACGTTCTCTATTGTGTCTGAGGCTTCTA 537631
Query 43135 CATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATT 43184
| || | ||||||||||| || || |||||||| |||||||| ||||||
Sbjct 537630 CCTCCAAGGTGATGGTTTTCCCTGTGAGCGTCTTGACAAAGATCTGCATT 537581
Score = 114 bits (126), Expect = 1e-20
Identities = 165/230 (72%), Gaps = 2/230 (1%)
Strand=Plus/Minus
Query 42956 TCCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 43015
|||||| | | ||||| ||||| ||||||||| ||| ||||| ||||||||||| |
Sbjct 536669 TCCTCCCCGGAGTCGCAATACCAAGTGCAATGTGGACTCTTTTTGGATATTGTAATCTGA 536610
Query 43016 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGG 43075
||||| ||| | || || | ||| |||||||| || || | ||||||||||||| ||
Sbjct 536609 AAGAGTGCGCCCATCTTCCAACTGTTTACCAGCAAAGATCAAACGCTGCTGGTCGGGAGG 536550
Query 43076 CACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCG-TCGCCACCGTGTCGCTCGATTCCA 43134
| | || |||| | ||| | || | | | || | | | ||||| | || |
Sbjct 536549 GATTCCTTCTTTGT-CTTGAATCTTGGCCTTAACGTTTTCTATTGTGTCTGAAGCCTCAA 536491
Query 43135 CATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATT 43184
| |||| ||||||||||| || || |||||||| || ||||| ||||||
Sbjct 536490 CTTCGAGTGTGATGGTTTTCCCTGTGAGCGTCTTGACGAAGATCTGCATT 536441
Score = 114 bits (126), Expect = 1e-20
Identities = 165/230 (72%), Gaps = 2/230 (1%)
Strand=Plus/Minus
Query 42956 TCCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 43015
|||||||| | ||||||||||| |||| |||| ||| ||||| || |||||||| |
Sbjct 538493 TCCTCCTCGGAGTCGCAACACCAAGTGCAGTGTGGACTCTTTTTGGATGTTGTAATCTGA 538434
Query 43016 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGG 43075
||||| ||| | || || | ||| || ||||| ||||| | ||||||||||||| ||
Sbjct 538433 AAGAGTGCGCCCATCTTCCAACTGTTTGCCAGCAAATATCAAACGCTGCTGGTCGGGAGG 538374
Query 43076 CACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCG-TCGCCACCGTGTCGCTCGATTCCA 43134
| | ||| |||| | ||| | || | | | || | | | ||||| | || |
Sbjct 538373 GATTCCCTCTTTGT-CTTGAATCTTAGCCTTAACGTTATCTATTGTGTCTGAAGCCTCAA 538315
Query 43135 CATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATT 43184
| || | ||||||||||| ||||| || || || |||||||| ||||||
Sbjct 538314 CTTCCAGGGTGATGGTTTTCCCCGTGAGTGTTTTGACAAAGATCTGCATT 538265
Score = 114 bits (126), Expect = 1e-20
Identities = 165/230 (72%), Gaps = 2/230 (1%)
Strand=Plus/Minus
Query 42956 TCCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 43015
|||||||| | ||||||||||| |||| ||| ||| || || || |||||||| |
Sbjct 538949 TCCTCCTCGGAGTCGCAACACCAAGTGCAGTGTCGACTCTTTCTGGATGTTGTAATCTGA 538890
Query 43016 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGG 43075
||||| || | || || ||||| |||||||| || || | ||||||||||| | ||
Sbjct 538889 AAGAGTGCGACCATCTTCCAGCTGTTTACCAGCAAAGATCAAACGCTGCTGGTCAGGAGG 538830
Query 43076 CACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCG-TCGCCACCGTGTCGCTCGATTCCA 43134
| | || |||| | ||| | || | || | || || | | ||||| | || |
Sbjct 538829 GATTCCTTCTTTGT-CTTGAATCTTGGCTTTAACGTTCTCTATTGTGTCTGAAGCCTCAA 538771
Query 43135 CATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATT 43184
| || | ||||||||||| ||||| |||||||| |||||||| ||||||
Sbjct 538770 CTTCCAGGGTGATGGTTTTCCCCGTCAGCGTCTTGACAAAGATCTGCATT 538721
Score = 111 bits (122), Expect = 2e-19
Identities = 164/230 (71%), Gaps = 2/230 (1%)
Strand=Plus/Minus
Query 42956 TCCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 43015
|||||||| | ||||||||||| |||| |||| ||| ||||| ||||||||||| |
Sbjct 537353 TCCTCCTCGGAGTCGCAACACCAAGTGCAGTGTGGACTCTTTTTGGATATTGTAATCTGA 537294
Query 43016 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGG 43075
|| || ||| | || || | || || ||||| || || | ||||||||||||| ||
Sbjct 537293 AAGGGTGCGCCCATCTTCCAATTGTTTGCCAGCAAAGATCAAACGCTGCTGGTCGGGAGG 537234
Query 43076 CACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCG-TCGCCACCGTGTCGCTCGATTCCA 43134
| | || |||| | ||| | || | | | || | | | ||||| | || |
Sbjct 537233 GATACCTTCTTTGT-CTTGAATCTTGGCCTTAACGTTTTCTATTGTGTCTGAAGCCTCAA 537175
Query 43135 CATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATT 43184
| |||| ||||||||||| ||||| |||||||| || ||||| ||||||
Sbjct 537174 CTTCGAGTGTGATGGTTTTCCCCGTCAGCGTCTTAACGAAGATCTGCATT 537125
Score = 105 bits (116), Expect = 8e-18
Identities = 163/230 (71%), Gaps = 2/230 (1%)
Strand=Plus/Minus
Query 42956 TCCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 43015
|||||||| | ||||||||||| |||| |||| ||| ||||| ||||||||||| |
Sbjct 536897 TCCTCCTCGGAGTCGCAACACCAAGTGCAGTGTGGACTCTTTTTGGATATTGTAATCTGA 536838
Query 43016 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGG 43075
|| || ||| | || || | || || ||||| || || | ||||||||||||| ||
Sbjct 536837 AAGTGTGCGCCCATCTTCCAATTGTTTGCCAGCAAAGATCAAACGCTGCTGGTCGGGAGG 536778
Query 43076 CACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCG-TCGCCACCGTGTCGCTCGATTCCA 43134
| | || |||| | ||| | || | | | || | | | ||||| | || |
Sbjct 536777 GATTCCTTCTTTGT-CTTGAATCTTGGCCTTAACGTTTTCTATTGTGTCTGAAGCCTCAA 536719
Query 43135 CATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATT 43184
| |||| ||||||||||| || || |||||||| || ||||| ||||||
Sbjct 536718 CTTCGAGTGTGATGGTTTTCCCTGTGAGCGTCTTGACGAAGATCTGCATT 536669
Score = 100 bits (110), Expect = 3e-16
Identities = 154/217 (71%), Gaps = 2/217 (1%)
Strand=Plus/Minus
Query 42969 CGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCG 43028
|||||||| || |||| |||| ||||||||| || || ||||| | || || ||| |
Sbjct 538024 CGCAACACTAAGTGCAGTGTGGACTCCTTTTGGATGTTATAATCTGAAAGTGTGCGCCCA 537965
Query 43029 TCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTG 43088
|| || | ||| || ||||| || || | ||||||||||||| || | | || |||
Sbjct 537964 TCTTCCAACTGTTTGCCAGCAAAGATCAAACGCTGCTGGTCGGGAGGGATTCCTTCTTTG 537905
Query 43089 TCCATGATTTTTTGTTTGAGCG-TCGCCACCGTGTCGCTCGATTCCACATCGACCGTGAT 43147
| | ||| | || | | | || || | | ||||| | || || || | |||||
Sbjct 537904 T-CTTGAATCTTGGCCTTAACGTTCTCTATTGTGTCTGAAGCCTCAACGTCCAGGGTGAT 537846
Query 43148 GGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATT 43184
|||||| ||||| ||||| || |||||||| ||||||
Sbjct 537845 GGTTTTCCCCGTGAGCGTTTTGACAAAGATCTGCATT 537809
Score = 98.7 bits (108), Expect = 1e-15
Identities = 161/232 (69%), Gaps = 0/232 (0%)
Strand=Plus/Minus
Query 42956 TCCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 43015
|||||||| | ||||| ||||| |||| |||| ||| ||||| ||||||||||| |
Sbjct 536441 TCCTCCTCGGAGTCGCAATACCAAGTGCAGTGTGGACTCTTTTTGGATATTGTAATCTGA 536382
Query 43016 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGG 43075
||||| || | || || | ||| || ||||| || || | ||||||||||||| ||
Sbjct 536381 AAGAGTGCGACCATCTTCCAACTGTTTCCCAGCAAAGATCAAACGCTGCTGGTCGGGAGG 536322
Query 43076 CACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCAC 43135
| | || ||||| ||| || || | || | | ||||| | ||| ||
Sbjct 536321 GATTCCTTCTTTGTCTTGGATCTTGGCCTTCACATTCTCTATTGTGTCTGAGGCTTCTAC 536262
Query 43136 ATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATTTTT 43187
|| | ||||||||||| || || || || || || ||||| ||||| |||
Sbjct 536261 CTCCAAGGTGATGGTTTTACCTGTGAGGGTTTTGACGAAGATCTGCATATTT 536210
>seq5506
Length=6646
Score = 107 bits (118), Expect = 2e-18
Identities = 68/74 (92%), Gaps = 0/74 (0%)
Strand=Plus/Minus
Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125
|||| |||| ||||||||||||| ||||||||||||||||||||| ||||| |||||||
Sbjct 2795 CTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTAACCACTA 2736
Query 60126 TACTACCGAGGATT 60139
||||||||||||||
Sbjct 2735 TACTACCGAGGATT 2722
>seq3373
Length=6105
Score = 107 bits (118), Expect = 2e-18
Identities = 68/74 (92%), Gaps = 0/74 (0%)
Strand=Plus/Plus
Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125
|||| |||| ||||||||||||| ||||||||||||||||||||| ||||| |||||||
Sbjct 1339 CTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTAACCACTA 1398
Query 60126 TACTACCGAGGATT 60139
||||||||||||||
Sbjct 1399 TACTACCGAGGATT 1412
>seq234
Length=159382
Score = 107 bits (118), Expect = 2e-18
Identities = 68/74 (92%), Gaps = 0/74 (0%)
Strand=Plus/Minus
Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125
|||| |||| ||||||||||||| ||||||||||||||||||||| ||||| |||||||
Sbjct 1306 CTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTAACCACTA 1247
Query 60126 TACTACCGAGGATT 60139
||||||||||||||
Sbjct 1246 TACTACCGAGGATT 1233
>seq139
Length=5215023
Score = 107 bits (118), Expect = 2e-18
Identities = 68/74 (92%), Gaps = 0/74 (0%)
Strand=Plus/Minus
Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125
|||| |||| ||||||||||||| ||||||||||||||||||||| ||||| |||||||
Sbjct 2094 CTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTAACCACTA 2035
Query 60126 TACTACCGAGGATT 60139
||||||||||||||
Sbjct 2034 TACTACCGAGGATT 2021
Score = 87.8 bits (96), Expect = 2e-12
Identities = 63/73 (86%), Gaps = 0/73 (0%)
Strand=Plus/Minus
Query 60052 TTATGAAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGA 60111
|||| ||| || | |||| |||| ||||||||||||| |||||||||||||||||||||
Sbjct 3635 TTATAAAATATATCCTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGG 3576
Query 60112 CATACTCACCACT 60124
||||| ||||||
Sbjct 3575 GATACTAACCACT 3563
>seq1079
Length=186965
Score = 104 bits (114), Expect = 3e-17
Identities = 66/72 (92%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 60068 CCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTATA 60127
|| |||| ||||||||||||| ||||||||||||||||||||| ||||| |||||||||
Sbjct 141204 CCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTAACCACTATA 141145
Query 60128 CTACCGAGGATT 60139
||||||||||||
Sbjct 141144 CTACCGAGGATT 141133
Score = 98.7 bits (108), Expect = 1e-15
Identities = 66/74 (89%), Gaps = 0/74 (0%)
Strand=Plus/Minus
Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125
|||| || | ||||||||||||| ||||| |||||||||||||||| ||||| |||||||
Sbjct 140250 CTCCCCGTCGGGGAATCGAACCCCGGTCTTCCGCGTGACAGGCGGAGATACTGACCACTA 140191
Query 60126 TACTACCGAGGATT 60139
||||| ||||||||
Sbjct 140190 TACTAACGAGGATT 140177
>seq154
Length=582849
Score = 104 bits (114), Expect = 3e-17
Identities = 78/91 (86%), Gaps = 2/91 (2%)
Strand=Plus/Plus
Query 60057 AAAAATT--TTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACAT 60114
||||||| | |||| || | ||||||||||||| ||||| |||||||||||||||| ||
Sbjct 213901 AAAAATTAATCCTCCCCGTCGGGGAATCGAACCCCGGTCTTCCGCGTGACAGGCGGAGAT 213960
Query 60115 ACTCACCACTATACTACCGAGGATTGAATAT 60145
||| |||||||||||| |||||||| ||||
Sbjct 213961 ACTGACCACTATACTAACGAGGATTTTATAT 213991
>seq4063
Length=10288
Score = 98.7 bits (108), Expect = 1e-15
Identities = 66/74 (89%), Gaps = 0/74 (0%)
Strand=Plus/Minus
Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125
|||| || | ||||||||||||| ||||| |||||||||||||||| ||||| |||||||
Sbjct 5776 CTCCCCGTCGGGGAATCGAACCCCGGTCTTCCGCGTGACAGGCGGAGATACTGACCACTA 5717
Query 60126 TACTACCGAGGATT 60139
||||| ||||||||
Sbjct 5716 TACTAACGAGGATT 5703
>seq826
Length=2172258
Score = 98.7 bits (108), Expect = 1e-15
Identities = 73/84 (87%), Gaps = 1/84 (1%)
Strand=Plus/Minus
Query 60057 AAAAATTTTC-TCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATA 60115
|||||| || ||| || | ||||||||||||| ||||| |||||||||||||||| |||
Sbjct 1702098 AAAAATAATCCTCCCCGTCGGGGAATCGAACCCCGGTCTTCCGCGTGACAGGCGGAGATA 1702039
Query 60116 CTCACCACTATACTACCGAGGATT 60139
|| |||||||||||| ||||||||
Sbjct 1702038 CTAACCACTATACTAACGAGGATT 1702015
>seq314
Length=1207542
Score = 98.7 bits (108), Expect = 1e-15
Identities = 66/74 (89%), Gaps = 0/74 (0%)
Strand=Plus/Plus
Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125
|||| || | ||||||||||||| ||||| |||||||||||||||| ||||| |||||||
Sbjct 133265 CTCCCCGTCGGGGAATCGAACCCCGGTCTTCCGCGTGACAGGCGGAGATACTGACCACTA 133324
Query 60126 TACTACCGAGGATT 60139
||||| ||||||||
Sbjct 133325 TACTAACGAGGATT 133338
>seq178
Length=1753356
Score = 98.7 bits (108), Expect = 1e-15
Identities = 73/84 (87%), Gaps = 1/84 (1%)
Strand=Plus/Plus
Query 60057 AAAAATTTTC-TCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATA 60115
|||||| || ||| || | ||||||||||||| ||||| |||||||||||||||| |||
Sbjct 1236468 AAAAATAATCCTCCCCGTCGGGGAATCGAACCCCGGTCTTCCGCGTGACAGGCGGAGATA 1236527
Query 60116 CTCACCACTATACTACCGAGGATT 60139
|| |||||||||||| ||||||||
Sbjct 1236528 CTGACCACTATACTAACGAGGATT 1236551
>seq49
Length=1886280
Score = 91.5 bits (100), Expect = 2e-13
Identities = 138/194 (71%), Gaps = 2/194 (1%)
Strand=Plus/Plus
Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051
||||||||||||||| || |||| || || || | || || || ||||||||||||||
Sbjct 1161136 CTCCTTTTGAATATTATAGTCAGAAAGTGTGCGTCCATCTTCAAGTTGCTTACCAGCGAA 1161195
Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCG 43110
|| | || ||||| || | || | || |||||||||| ||| |||||| || |
Sbjct 1161196 AATCAATCTTTGCTGATCTGGGGGAATGCCCTCCTTGTCC-TGAATTTTTGCCTTCACAT 1161254
Query 43111 TCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTA 43170
|| | | ||| || | ||| || || | || || ||||| || || || || || |
Sbjct 1161255 TCTCAATCGTATCAGAAGCTTCAACTTCTAAAGTAATAGTTTTTCCAGTAAGGGTTTTGA 1161314
Query 43171 CAAAGATTTGCATT 43184
| || |||||||||
Sbjct 1161315 CGAAAATTTGCATT 1161328
Score = 89.7 bits (98), Expect = 6e-13
Identities = 137/193 (71%), Gaps = 2/193 (1%)
Strand=Plus/Plus
Query 42993 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 43052
|| ||||||||||||||||||| || || || | || || || ||||||||||||||
Sbjct 1162723 TCTTTTTGAATATTGTAATCAGAGAGTGTGCGTCCATCTTCAAGTTGCTTACCAGCGAAA 1162782
Query 43053 ATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGT 43111
|| | || ||| ||||| | || | | |||||| | | ||| |||||| ||| | |
Sbjct 1162783 ATCAATCTCTGTTGGTCTGGTGGAATACCCTCCTTAT-CTTGAATTTTTGCTTTAACATT 1162841
Query 43112 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 43171
| | || || | ||| || || | ||||| || || ||||| || ||||| ||
Sbjct 1162842 TTCGATGGTATCTGAAGCTTCAACTTCTAAAGTGATCGTCTTTCCCGTAAGGGTCTTGAC 1162901
Query 43172 AAAGATTTGCATT 43184
|| |||||||||
Sbjct 1162902 GAAAATTTGCATT 1162914
Score = 84.2 bits (92), Expect = 3e-11
Identities = 158/230 (69%), Gaps = 2/230 (1%)
Strand=Plus/Plus
Query 42956 TCCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 43015
|||||||| | |||| || | ||| | || |||||||||||| || || || |
Sbjct 1161328 TCCTCCTCGGAGTCGCAGAACGAGATGAAGAGTTGACTCCTTTTGAATGTTATAGTCCGA 1161387
Query 43016 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGG 43075
|| || || | || || || |||||||||||||| || | || || ||||| | ||
Sbjct 1161388 AAGTGTGCGTCCATCTTCAAGTTGCTTACCAGCGAAAATCAATCTTTGTTGGTCTGGTGG 1161447
Query 43076 CACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGTCGCCACCGTGTCGCTCGATTCCA 43134
| || |||||||||| ||| |||||| || | || | | ||| || | ||| |
Sbjct 1161448 AATGCCCTCCTTGTCC-TGAATTTTTGCCTTCACATTCTCAATCGTATCAGAAGCTTCAA 1161506
Query 43135 CATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATT 43184
| || | || || ||||| || || || || || || || |||||||||
Sbjct 1161507 CTTCTAAAGTAATAGTTTTTCCAGTAAGGGTTTTGACGAAAATTTGCATT 1161556
Score = 84.2 bits (92), Expect = 3e-11
Identities = 136/193 (70%), Gaps = 2/193 (1%)
Strand=Plus/Plus
Query 42993 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 43052
||||| |||||||| || || || || || || |||| || |||||||||||||||||
Sbjct 1162039 TCCTTCTGAATATTATAGTCTGCAAGTGTGCGTCCGTCTTCAAGCTGCTTACCAGCGAAA 1162098
Query 43053 ATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGT 43111
|| | || ||| || || | || | | ||||||||| ||| |||||| || | |
Sbjct 1162099 ATCAATCTCTGTTGATCAGGTGGAATACCTTCCTTGTCC-TGAATTTTTGCCTTCACATT 1162157
Query 43112 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 43171
| | | || || | ||| || || | ||||| || || ||||| || || || ||
Sbjct 1162158 CTCAATTGTATCAGAAGCTTCAACTTCTAAAGTGATTGTCTTTCCCGTGAGAGTTTTAAC 1162217
Query 43172 AAAGATTTGCATT 43184
|| |||||||||
Sbjct 1162218 GAAAATTTGCATT 1162230
>seq24967
Length=292
Score = 86.0 bits (94), Expect = 7e-12
Identities = 53/57 (93%), Gaps = 0/57 (0%)
Strand=Plus/Plus
Query 60083 GAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTATACTACCGAGGATT 60139
|||||| ||||||||||||||||||||| ||||| |||||||||||||||||||||
Sbjct 1 GAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTAACCACTATACTACCGAGGATT 57
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 571620565950480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |