Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Habropoda_20laboriosa_20[refseq_20GCF_5F001263275.1_202015-08-13]
27,566 sequences; 296,954,667 total letters
Query= NC_002593.1
Length=100999
Score E
Sequences producing significant alignments: (Bits) Value
seq65 91.5 1e-13
>seq65
Length=771584
Score = 91.5 bits (100), Expect = 1e-13
Identities = 157/228 (69%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 34162 TCCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGA 34221
||| || || || | || ||||| ||| | || ||||| || |||||||| || ||
Sbjct 538493 TCCTCCTCGGAGTCGCAACACCAAGTGCAGTGTGGACTCTTTTTGGATGTTGTAATCTGA 538434
Query 34222 CAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGG 34281
|| || | || |||||||| ||||| || || || | |||||||||||| ||
Sbjct 538433 AAGAGTGCGCCCATCTTCCAACTGTTTGCCAGCAAATATCAAACGCTGCTGGTCGGGAGG 538374
Query 34282 CACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGAC 34341
| | ||| ||||| ||||| ||| | | |||| | || | | || ||
Sbjct 538373 GATTCCCTCTTTGTCTTGAATCTTAGCCTTAACGTTATCTATTGTGTCTGAAGCCTCAAC 538314
Query 34342 GTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389
|||| ||||||||||| || ||||| ||||| ||||||||||||||
Sbjct 538313 TTCCAGGGTGATGGTTTTCCCCGTGAGTGTTTTGACAAAGATCTGCAT 538266
Score = 87.8 bits (96), Expect = 1e-12
Identities = 156/228 (68%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 34162 TCCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGA 34221
||| || || || | || ||||| ||| | || ||||| || |||||||| || ||
Sbjct 537581 TCCTCCTCGGAGTCGCAACACCAAGTGCAGTGTGGACTCTTTTTGGATGTTGTAATCTGA 537522
Query 34222 CAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGG 34281
|| || | || |||||||| ||||| || || || | |||||||||||| ||
Sbjct 537521 AAGAGTGCGCCCATCTTCCAACTGTTTGCCAGCAAAGATTAAACGCTGCTGGTCGGGAGG 537462
Query 34282 CACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGAC 34341
| | || ||||| ||||| ||| | | |||| | || | | ||| ||
Sbjct 537461 GATTCCTTCTTTGTCTTGAATCTTGGCCTTAACGTTCTCTATTGTGTCTGAGGCTTCTAC 537402
Query 34342 GTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389
|||| ||||||||||| || ||||| || || ||||||||||||||
Sbjct 537401 CTCCAAGGTGATGGTTTTCCCTGTGAGCGTCTTGACAAAGATCTGCAT 537354
Score = 84.2 bits (92), Expect = 1e-11
Identities = 161/231 (70%), Gaps = 6/231 (3%)
Strand=Plus/Minus
Query 34162 TCCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGA 34221
||| || || || | || ||||| ||| | || || || || |||||||| || ||
Sbjct 538721 TCCTCCTCGGAGTCGCAACACCAAGTGCAGTGTGGACTCCTTTTGGATGTTGTAATCTGA 538662
Query 34222 CAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTC-GACGG 34280
|| || | || ||||||||||| || || || || || ||||||||||| || ||
Sbjct 538661 AAGAGTGCGTCCATCTTCCAACTGCTTCCCAGCAAAGATCAGACGCTGCTGGTCAGAAGG 538602
Query 34281 GCACGCTCTCCTTGTCGGCTATCTTTTGCTTTA--GATCGGCTATCGAATCGGTCGATTC 34338
| | | || ||||| | || ||| |||||| | || |||| | || | | ||
Sbjct 538601 G-ATTCCTTCTTTGTCTACGAT-TTTGGCTTTAACGTTC-TCTATTGTGTCTGAAGCCTC 538545
Query 34339 GACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389
|| |||| ||||||||||| || ||||| || || || |||||||||||
Sbjct 538544 AACTTCCAGGGTGATGGTTTTCCCCGTGAGCGTCTTGACGAAGATCTGCAT 538494
Score = 82.4 bits (90), Expect = 5e-11
Identities = 155/228 (68%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 34162 TCCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGA 34221
|||||| || || | || ||| | ||| | || || || || ||||| || || ||
Sbjct 538037 TCCGCCACGGAGTCGCAACACTAAGTGCAGTGTGGACTCCTTTTGGATGTTATAATCTGA 537978
Query 34222 CAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGG 34281
|| || | || |||||||| ||||| || || || | |||||||||||| ||
Sbjct 537977 AAGTGTGCGCCCATCTTCCAACTGTTTGCCAGCAAAGATCAAACGCTGCTGGTCGGGAGG 537918
Query 34282 CACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGAC 34341
| | || ||||| ||||| ||| | | |||| | || | | || ||
Sbjct 537917 GATTCCTTCTTTGTCTTGAATCTTGGCCTTAACGTTCTCTATTGTGTCTGAAGCCTCAAC 537858
Query 34342 GTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389
||||| ||||||||||| || ||||| ||||| ||||||||||||||
Sbjct 537857 GTCCAGGGTGATGGTTTTCCCCGTGAGCGTTTTGACAAAGATCTGCAT 537810
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 322963460528960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |