Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Habropoda_20laboriosa_20[refseq_20GCF_5F001263275.1_202015-08-13]
27,566 sequences; 296,954,667 total letters
Query= NC_002642.1
Length=144575
Score E
Sequences producing significant alignments: (Bits) Value
seq284 107 2e-18
>seq284
Length=1419496
Score = 107 bits (118), Expect = 2e-18
Identities = 145/202 (72%), Gaps = 0/202 (0%)
Strand=Plus/Minus
Query 16488 TTTCTTTGCTATCTAAAATATAAGTATCTATTAGTAAACTATACATTTCTGAATGAATAT 16547
||||||| |||| |||||| ||||| |||| ||| ||||||||||| || | ||
Sbjct 890252 TTTCTTTAGCATCTGCAATATATGTATCGATTAACAAAGAGTACATTTCTGAGTGCACAT 890193
Query 16548 TCTCCATTGCTATCTGAAAACCATAAAAGCATCTAGCTTCGGATATTTGTACTTCAGAGT 16607
| |||||||| | ||||| ||||||||||| | || || | |||||| || || |
Sbjct 890192 TTTCCATTGCAACTTGAAAGCCATAAAAGCAACGTGCCTCTGTTATTTGCACCTCCTGGC 890133
Query 16608 AAAACCTTTCTGCTAAGTTTTCGTTAACTATTCCATCGCTAGCTGCAAAAAACGCAAGTA 16667
||| | ||| | | ||||| || || |||||||| ||| |||||||| || | ||
Sbjct 890132 TAAATCGTTCAACAAGATTTTCATTGACAATTCCATCAGAAGCAGCAAAAAATGCTAATA 890073
Query 16668 TGTGTTTAATAAAAtttttttC 16689
||| ||||| ||||| ||
Sbjct 890072 CATGTGATATAAATTTTTTCTC 890051
Score = 100 bits (110), Expect = 3e-16
Identities = 139/195 (71%), Gaps = 0/195 (0%)
Strand=Plus/Minus
Query 16286 AATGTAAGACCTGGCATTAGTCCTCGTTTTTTAATCCAAAATATAGCGGCAAATGAACCA 16345
|||||||| |||||||| ||||||| || || | |||||| || || ||||| ||||
Sbjct 890529 AATGTAAGGCCTGGCATAAGTCCTCTCTTCTTTAACCAAAAAATGGCAGCAAAACTACCA 890470
Query 16346 GAAAAGAATATACCTTCAACTGCGGCAAATGCAACCAATCGCTCACCGTACGTTCTAttt 16405
|||||| |||||||| ||||| |||||||||| | || || | || | ||
Sbjct 890469 CTAAAGAAAATACCTTCCACTGCAGCAAATGCAATTACACGTTCGGGAAAGGTAGCAGTT 890410
Query 16406 ttactttctatccattttttagcccaatttgctttttgtttAACACAGTTCATGTTCTCT 16465
| | | |||||| ||| |||||||| |||||| |||||| || || ||
Sbjct 890409 TCATGATTTATCCAATTTAATGCCCAATTAGCTTTTCTCGCAACACACGGCAAATTTTCA 890350
Query 16466 ATTGCATTAAATAAA 16480
|| ||||||||||||
Sbjct 890349 ATCGCATTAAATAAA 890335
Score = 87.8 bits (96), Expect = 2e-12
Identities = 87/113 (77%), Gaps = 0/113 (0%)
Strand=Plus/Minus
Query 15917 TCTTTTTTATTTGACATAACTGACATTTTTTGATATTCACTAACTCTCTTTTCAAAGAAA 15976
||| |||| |||| ||| ||| | |||||||||||| | |||| | || || || ||
Sbjct 891073 TCTATTTTGTTTGCCATCACTCCCCATTTTTGATATTCTCCAACTTTTTTCTCGAAAAAG 891014
Query 15977 TTTGTTTTTCCTTCTAATGAAATATTTTCCATAAAATCAAAAGGATTTTTTGA 16029
|| || || ||||| || ||||||| |||||| ||||| || ||||||| |||
Sbjct 891013 TTCGTCTTACCTTCCAAAGAAATATGTTCCATGAAATCGAATGGATTTTCTGA 890961
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 462352629927600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |