Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Habropoda_20laboriosa_20[refseq_20GCF_5F001263275.1_202015-08-13] 27,566 sequences; 296,954,667 total letters Query= NC_002686.2 Length=124784 Score E Sequences producing significant alignments: (Bits) Value seq151 113 4e-20 >seq151 Length=1873176 Score = 113 bits (124), Expect = 4e-20 Identities = 182/255 (71%), Gaps = 10/255 (4%) Strand=Plus/Minus Query 20043 ATTTCCCTTATTAACTACGAAACGGGTATTTTGGAAAGGCGTTGTTGAAGAGTTATTATG 20102 |||||| ||| ||||||| ||||| |||| ||||| || || | || || || ||||| Sbjct 1666019 ATTTCCATTACTAACTACAAAACGAGTATACTGGAAGGGTGTACTGGAGGAATTGTTATG 1665960 Query 20103 GTTTATTAAAGGATCAACAAATTCTACCGAGCTTGTA---GAAAAAGGAGTTAAGATTTG 20159 ||| || ||||||||||||||| ||| || | || |||||||| ||| | ||||| Sbjct 1665959 GTTCATCAAAGGATCAACAAATGCTA---AGTTATTAAGTGAAAAAGGTGTTCATATTTG 1665903 Query 20160 GAGCGCACATGGATCTAAGCAA-TTTTTACACAGCAATGGATTTGACA-ACCGTCAAGAG 20217 | ||| | | || | | || | ||| || | | || ||| || | |||| Sbjct 1665902 GGATGCAAACAGTTC-ACGTAACTACTTAGAC-TCTTGTAACTTTACAGACAGGGAAGAA 1665845 Query 20218 GGGGATTTGGGTCCTGTGTATGGATTTCAATGGAGACATTTTGGAGCTGAATATGTTGAC 20277 || |||||||| || || ||||| ||||| |||||||||||||| || ||||| ||| Sbjct 1665844 GGAGATTTGGGACCAGTTTATGGGTTTCAGTGGAGACATTTTGGTGCAGAATACAAAGAC 1665785 Query 20278 ATGAACACAAATTAT 20292 ||| | || ||||| Sbjct 1665784 ATGCATGCAGATTAT 1665770 Score = 91.5 bits (100), Expect = 1e-13 Identities = 153/219 (70%), Gaps = 2/219 (1%) Strand=Plus/Minus Query 20347 CCAAACGACAGAAGAATTATTTTATGCGCCTGGAACGCTAAAGATGTGCCTTTAATGGCT 20406 ||||| || ||||||||||| | | || ||||| || ||| | || |||||| Sbjct 1665603 CCAAATGATAGAAGAATTATAATGTCAGCATGGAATCCTGTTGATATTCCAAAAATGGCA 1665544 Query 20407 TTGCCTCCATGTCATATGCTATG-CCAATTTTACGTTGCTAATAATGAATTGTCGTGTCA 20465 | || ||||| ||| || | || || ||||| || ||| ||||| || ||||| Sbjct 1665543 CTACCCCCATGCCAT-TGTTTTGTTCAGTTTTATGTGAGCAATGGAGAATTATCATGTCA 1665485 Query 20466 AATGTATCAACGATCCGCTGATATGGGACTGGGTGTTCCTTTCAATATTGCAAGTTATGC 20525 | |||||| || ||| |||||||| || ||||| || || ||||| ||| ||| | Sbjct 1665484 GCTTTATCAAAGAAGCGCCGATATGGGTCTTGGTGTACCATTTAATATAGCATCCTATTC 1665425 Query 20526 GCTGCTTACGTATATGATTGCACATGTTACAGATTTAAA 20564 || | || || ||| | ||||| |||||| ||||||| Sbjct 1665424 TCTATTAACTTACATGTTGGCACACGTTACAAATTTAAA 1665386 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 399049889893870