Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Habropoda_20laboriosa_20[refseq_20GCF_5F001263275.1_202015-08-13]
27,566 sequences; 296,954,667 total letters
Query= NC_002686.2
Length=124784
Score E
Sequences producing significant alignments: (Bits) Value
seq151 113 4e-20
>seq151
Length=1873176
Score = 113 bits (124), Expect = 4e-20
Identities = 182/255 (71%), Gaps = 10/255 (4%)
Strand=Plus/Minus
Query 20043 ATTTCCCTTATTAACTACGAAACGGGTATTTTGGAAAGGCGTTGTTGAAGAGTTATTATG 20102
|||||| ||| ||||||| ||||| |||| ||||| || || | || || || |||||
Sbjct 1666019 ATTTCCATTACTAACTACAAAACGAGTATACTGGAAGGGTGTACTGGAGGAATTGTTATG 1665960
Query 20103 GTTTATTAAAGGATCAACAAATTCTACCGAGCTTGTA---GAAAAAGGAGTTAAGATTTG 20159
||| || ||||||||||||||| ||| || | || |||||||| ||| | |||||
Sbjct 1665959 GTTCATCAAAGGATCAACAAATGCTA---AGTTATTAAGTGAAAAAGGTGTTCATATTTG 1665903
Query 20160 GAGCGCACATGGATCTAAGCAA-TTTTTACACAGCAATGGATTTGACA-ACCGTCAAGAG 20217
| ||| | | || | | || | ||| || | | || ||| || | ||||
Sbjct 1665902 GGATGCAAACAGTTC-ACGTAACTACTTAGAC-TCTTGTAACTTTACAGACAGGGAAGAA 1665845
Query 20218 GGGGATTTGGGTCCTGTGTATGGATTTCAATGGAGACATTTTGGAGCTGAATATGTTGAC 20277
|| |||||||| || || ||||| ||||| |||||||||||||| || ||||| |||
Sbjct 1665844 GGAGATTTGGGACCAGTTTATGGGTTTCAGTGGAGACATTTTGGTGCAGAATACAAAGAC 1665785
Query 20278 ATGAACACAAATTAT 20292
||| | || |||||
Sbjct 1665784 ATGCATGCAGATTAT 1665770
Score = 91.5 bits (100), Expect = 1e-13
Identities = 153/219 (70%), Gaps = 2/219 (1%)
Strand=Plus/Minus
Query 20347 CCAAACGACAGAAGAATTATTTTATGCGCCTGGAACGCTAAAGATGTGCCTTTAATGGCT 20406
||||| || ||||||||||| | | || ||||| || ||| | || ||||||
Sbjct 1665603 CCAAATGATAGAAGAATTATAATGTCAGCATGGAATCCTGTTGATATTCCAAAAATGGCA 1665544
Query 20407 TTGCCTCCATGTCATATGCTATG-CCAATTTTACGTTGCTAATAATGAATTGTCGTGTCA 20465
| || ||||| ||| || | || || ||||| || ||| ||||| || |||||
Sbjct 1665543 CTACCCCCATGCCAT-TGTTTTGTTCAGTTTTATGTGAGCAATGGAGAATTATCATGTCA 1665485
Query 20466 AATGTATCAACGATCCGCTGATATGGGACTGGGTGTTCCTTTCAATATTGCAAGTTATGC 20525
| |||||| || ||| |||||||| || ||||| || || ||||| ||| ||| |
Sbjct 1665484 GCTTTATCAAAGAAGCGCCGATATGGGTCTTGGTGTACCATTTAATATAGCATCCTATTC 1665425
Query 20526 GCTGCTTACGTATATGATTGCACATGTTACAGATTTAAA 20564
|| | || || ||| | ||||| |||||| |||||||
Sbjct 1665424 TCTATTAACTTACATGTTGGCACACGTTACAAATTTAAA 1665386
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 399049889893870
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |