Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Habropoda_20laboriosa_20[refseq_20GCF_5F001263275.1_202015-08-13] 27,566 sequences; 296,954,667 total letters Query= NC_002816.1 Length=123500 Score E Sequences producing significant alignments: (Bits) Value seq65 107 2e-18 seq75 87.8 1e-12 seq49 87.8 1e-12 >seq65 Length=771584 Score = 107 bits (118), Expect = 2e-18 Identities = 151/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 45125 AATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCG 45184 || ||||||||||| || ||| ||||| |||||||| || || |||| | || Sbjct 538933 AACACCAAGTGCAGTGTCGACTCTTTCTGGATGTTGTAATCTGAAAGAGTGCGACCATCT 538874 Query 45185 TCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCC 45244 ||||| ||||| || || || ||||| ||||| ||||| ||||| | || || ||||| Sbjct 538873 TCCAGCTGTTTACCAGCAAAGATCAAACGCTGCTGGTCAGGAGGGATTCCTTCTTTGTCT 538814 Query 45245 GCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTC 45304 ||| || ||||| | | | |||| | |||| || |||| ||| || || Sbjct 538813 TGAATCTTGGCTTTAACGTTCTCTATTGTGTCTGAAGCCTCAACTTCCAGGGTGATGGTT 538754 Query 45305 TTGCCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 || |||||||| ||||| |||||||| ||||| Sbjct 538753 TTCCCCGTCAGCGTCTTGACAAAGATCTGCAT 538722 Score = 104 bits (114), Expect = 2e-17 Identities = 150/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 45125 AATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCG 45184 || ||||||||||| ||| ||| || || |||||||| || || ||| | || Sbjct 538477 AACACCAAGTGCAGTGTGGACTCTTTTTGGATGTTGTAATCTGAAAGAGTGCGCCCATCT 538418 Query 45185 TCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCC 45244 |||| ||||| || || |||||||| ||||| ||||||||||| | ||||| ||||| Sbjct 538417 TCCAACTGTTTGCCAGCAAATATCAAACGCTGCTGGTCGGGAGGGATTCCCTCTTTGTCT 538358 Query 45245 GCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTC 45304 ||| || |||||| | | |||| | |||| || |||| ||| || || Sbjct 538357 TGAATCTTAGCCTTAACGTTATCTATTGTGTCTGAAGCCTCAACTTCCAGGGTGATGGTT 538298 Query 45305 TTGCCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 || ||||| || || || |||||||| ||||| Sbjct 538297 TTCCCCGTGAGTGTTTTGACAAAGATCTGCAT 538266 Score = 98.7 bits (108), Expect = 8e-16 Identities = 149/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 45125 AATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCG 45184 || || |||||||| ||| |||||| || ||||| || || ||| ||| | || Sbjct 538021 AACACTAAGTGCAGTGTGGACTCCTTTTGGATGTTATAATCTGAAAGTGTGCGCCCATCT 537962 Query 45185 TCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCC 45244 |||| ||||| || || || ||||| ||||| ||||||||||| | || || ||||| Sbjct 537961 TCCAACTGTTTGCCAGCAAAGATCAAACGCTGCTGGTCGGGAGGGATTCCTTCTTTGTCT 537902 Query 45245 GCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTC 45304 ||| || |||||| | | | |||| | |||| || |||| ||| || || Sbjct 537901 TGAATCTTGGCCTTAACGTTCTCTATTGTGTCTGAAGCCTCAACGTCCAGGGTGATGGTT 537842 Query 45305 TTGCCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 || ||||| || || || |||||||| ||||| Sbjct 537841 TTCCCCGTGAGCGTTTTGACAAAGATCTGCAT 537810 Score = 95.1 bits (104), Expect = 1e-14 Identities = 148/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 45125 AATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCG 45184 || ||||||||||| ||| ||| || || || ||||| || || ||| | || Sbjct 537337 AACACCAAGTGCAGTGTGGACTCTTTTTGGATATTGTAATCTGAAAGGGTGCGCCCATCT 537278 Query 45185 TCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCC 45244 |||| |||||| || || || ||||| ||||| ||||||||||| | ||| || ||||| Sbjct 537277 TCCAATTGTTTGCCAGCAAAGATCAAACGCTGCTGGTCGGGAGGGATACCTTCTTTGTCT 537218 Query 45245 GCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTC 45304 ||| || |||||| | | |||| | |||| || || | || || || Sbjct 537217 TGAATCTTGGCCTTAACGTTTTCTATTGTGTCTGAAGCCTCAACTTCGAGTGTGATGGTT 537158 Query 45305 TTGCCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 || |||||||| ||||| || ||||| ||||| Sbjct 537157 TTCCCCGTCAGCGTCTTAACGAAGATCTGCAT 537126 Score = 89.7 bits (98), Expect = 4e-13 Identities = 147/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 45125 AATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCG 45184 || ||||||||||| ||| |||||| || || ||||| || ||| ||| | || Sbjct 537109 AACACCAAGTGCAGGGTGGACTCCTTTTGGATATTGTAATCTGAAAGTGTGCGCCCATCT 537050 Query 45185 TCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCC 45244 |||| ||||| || || || ||||| ||||| ||||||||||| | || || ||||| Sbjct 537049 TCCAACTGTTTACCAGCAAAGATCAAACGCTGCTGGTCGGGAGGGATTCCTTCTTTGTCT 536990 Query 45245 GCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTC 45304 ||| || |||||| | | | |||| | |||| || || | || || || Sbjct 536989 TGAATCTTGGCCTTAACGTTCTCTATTGTGTCTGAAGCCTCAACTTCGAGTGTGATGGTT 536930 Query 45305 TTGCCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 || || || || ||||| || ||||| ||||| Sbjct 536929 TTCCCTGTGAGCGTCTTGACGAAGATCTGCAT 536898 Score = 89.7 bits (98), Expect = 4e-13 Identities = 147/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 45125 AATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCG 45184 || ||||||||||| ||| ||| || || |||||||| || || ||| | || Sbjct 537565 AACACCAAGTGCAGTGTGGACTCTTTTTGGATGTTGTAATCTGAAAGAGTGCGCCCATCT 537506 Query 45185 TCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCC 45244 |||| ||||| || || || || || ||||| ||||||||||| | || || ||||| Sbjct 537505 TCCAACTGTTTGCCAGCAAAGATTAAACGCTGCTGGTCGGGAGGGATTCCTTCTTTGTCT 537446 Query 45245 GCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTC 45304 ||| || |||||| | | | |||| | || ||||||| ||| || || Sbjct 537445 TGAATCTTGGCCTTAACGTTCTCTATTGTGTCTGAGGCTTCTACCTCCAAGGTGATGGTT 537386 Query 45305 TTGCCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 || || || || ||||| |||||||| ||||| Sbjct 537385 TTCCCTGTGAGCGTCTTGACAAAGATCTGCAT 537354 Score = 86.0 bits (94), Expect = 5e-12 Identities = 146/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 45125 AATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCG 45184 || ||||||||||| ||| ||| || || || ||||| || ||| ||| | || Sbjct 536881 AACACCAAGTGCAGTGTGGACTCTTTTTGGATATTGTAATCTGAAAGTGTGCGCCCATCT 536822 Query 45185 TCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCC 45244 |||| |||||| || || || ||||| ||||| ||||||||||| | || || ||||| Sbjct 536821 TCCAATTGTTTGCCAGCAAAGATCAAACGCTGCTGGTCGGGAGGGATTCCTTCTTTGTCT 536762 Query 45245 GCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTC 45304 ||| || |||||| | | |||| | |||| || || | || || || Sbjct 536761 TGAATCTTGGCCTTAACGTTTTCTATTGTGTCTGAAGCCTCAACTTCGAGTGTGATGGTT 536702 Query 45305 TTGCCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 || || || || ||||| || ||||| ||||| Sbjct 536701 TTCCCTGTGAGCGTCTTGACGAAGATCTGCAT 536670 Score = 86.0 bits (94), Expect = 5e-12 Identities = 146/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 45125 AATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCG 45184 || ||||||||||| ||| |||||| || |||||||| || || ||| | || Sbjct 538705 AACACCAAGTGCAGTGTGGACTCCTTTTGGATGTTGTAATCTGAAAGAGTGCGTCCATCT 538646 Query 45185 TCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCC 45244 |||| || || || || || |||| ||||| ||||| | ||| | || || ||||| Sbjct 538645 TCCAACTGCTTCCCAGCAAAGATCAGACGCTGCTGGTCAGAAGGGATTCCTTCTTTGTCT 538586 Query 45245 GCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTC 45304 | ||||| ||||| | | | |||| | |||| || |||| ||| || || Sbjct 538585 ACGATTTTGGCTTTAACGTTCTCTATTGTGTCTGAAGCCTCAACTTCCAGGGTGATGGTT 538526 Query 45305 TTGCCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 || ||||| || ||||| || ||||| ||||| Sbjct 538525 TTCCCCGTGAGCGTCTTGACGAAGATCTGCAT 538494 >seq75 Length=5967246 Score = 87.8 bits (96), Expect = 1e-12 Identities = 96/128 (75%), Gaps = 0/128 (0%) Strand=Plus/Plus Query 13245 GAGCAGATGGCGGATGCCGGTTTCTTCTACACTGGCTACGGTGACAATACAAAGTGCTTC 13304 || ||| |||| ||||| ||||||| || ||||| | ||||| | || ||| | Sbjct 461951 GAACAGTTGGCAGATGCAGGTTTCTATTATACTGGAAAAGGTGATCAAACTTTGTGTTAT 462010 Query 13305 TATTGTGACGGCGGATTGAAAGATTGGGAGCCGGAAGATGTACCTTGGGAACAGCATGTA 13364 |||||| || || |||||||||||||| || ||||||| |||||||| || |||| | Sbjct 462011 CATTGTGGAGGTGGTTTGAAAGATTGGGAACCAGAAGATGATCCTTGGGAGCAACATGCA 462070 Query 13365 AGATGGTT 13372 | |||||| Sbjct 462071 AAATGGTT 462078 >seq49 Length=1886280 Score = 87.8 bits (96), Expect = 1e-12 Identities = 134/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 45146 TCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAAT 45205 ||||||||||| || ||||| ||| ||| |||| || || || || || ||||| Sbjct 1162039 TCCTTCTGAATATTATAGTCTGCAAGTGTGCGTCCGTCTTCAAGCTGCTTACCAGCGAAA 1162098 Query 45206 ATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCC 45265 ||||| | |||||| || || || | ||| ||||||||| ||||||| ||| || | Sbjct 1162099 ATCAATCTCTGTTGATCAGGTGGAATACCTTCCTTGTCCTGAATTTTTGCCTTCACATTC 1162158 Query 45266 GCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACA 45325 | | | || | | || || || | || || ||||| ||||| ||||| || || Sbjct 1162159 TCAATTGTATCAGAAGCTTCAACTTCTAAAGTGATTGTCTTTCCCGTGAGAGTTTTAACG 1162218 Query 45326 AAGATTTGCAT 45336 || |||||||| Sbjct 1162219 AAAATTTGCAT 1162229 Score = 87.8 bits (96), Expect = 1e-12 Identities = 134/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 45146 TCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAAT 45205 ||||||||||| || ||||| ||| ||| |||| || || || ||||| ||||| Sbjct 1162267 TCCTTCTGAATATTATAGTCTGCAAGTGTGCGTCCGTCTTCAAGCTGCTTTCCAGCGAAA 1162326 Query 45206 ATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCC 45265 ||||| | |||||| || || || | ||| ||||||||| ||||||| ||| || | Sbjct 1162327 ATCAATCTCTGTTGATCAGGTGGAATACCTTCCTTGTCCTGAATTTTTGCCTTCACATTC 1162386 Query 45266 GCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACA 45325 | | | || | | || || || | ||||| || || ||||| || || || || Sbjct 1162387 TCAATCGTATCAGAAGCTTCAACTTCTAAAGTAATAGTTTTTCCCGTAAGGGTTTTGACG 1162446 Query 45326 AAGATTTGCAT 45336 || |||||||| Sbjct 1162447 AAAATTTGCAT 1162457 Score = 87.8 bits (96), Expect = 1e-12 Identities = 134/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 45146 TCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAAT 45205 || ||||||||||| ||||| ||| ||| | || || ||||| || || ||||| Sbjct 1162495 TCTTTCTGAATGTTATAGTCAGAGAGTGTGCGTCCATCTTCAAGTTGCTTACCAGCGAAG 1162554 Query 45206 ATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCC 45265 ||||| | ||||||||| || || | ||||||||| || |||||| ||||| | Sbjct 1162555 ATCAATCTCTGTTGGTCTGGTGGAATACCCTCCTTATCTTGGATTTTTGCTTTAACATTC 1162614 Query 45266 GCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACA 45325 | | | || | | || || || | || |||||||| ||||| ||||| || || Sbjct 1162615 TCAATTGTATCAGAAGCTTCAACTTCTAAAGTGATCGTCTTTCCCGTGAGAGTTTTAACG 1162674 Query 45326 AAGATTTGCAT 45336 || |||||||| Sbjct 1162675 AAAATTTGCAT 1162685 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 394942470288886