Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Habropoda_20laboriosa_20[refseq_20GCF_5F001263275.1_202015-08-13] 27,566 sequences; 296,954,667 total letters Query= NC_003027.1 Length=150773 Score E Sequences producing significant alignments: (Bits) Value seq284 102 8e-17 >seq284 Length=1419496 Score = 102 bits (112), Expect = 8e-17 Identities = 133/183 (73%), Gaps = 1/183 (1%) Strand=Plus/Minus Query 14454 CCTTCTCTTTAGTACTTGAAATGTATGTATCAATAAGTAAGCTATACATTTCAGAGTGTA 14513 |||| ||||||| | || ||| |||||||| || | || |||||||| ||||| | Sbjct 890254 CCTT-TCTTTAGCATCTGCAATATATGTATCGATTAACAAAGAGTACATTTCTGAGTGCA 890196 Query 14514 TGTTTTCCATAGCTATCTGAAAACCATAAAAACATCTAGCTTCTGACCATTGTACCTCTG 14573 |||||||| || | ||||| |||||||| || | || |||| ||| ||||| Sbjct 890195 CATTTTCCATTGCAACTTGAAAGCCATAAAAGCAACGTGCCTCTGTTATTTGCACCTCCT 890136 Query 14574 AGTAAAATCTTTCGGCCAAATTTTCATTAACTATACCATCACTAGCTGCAAAAAATGCCA 14633 | ||||| ||| | | ||||||||| || || |||||| ||| ||||||||||| | Sbjct 890135 GGCTAAATCGTTCAACAAGATTTTCATTGACAATTCCATCAGAAGCAGCAAAAAATGCTA 890076 Query 14634 ATA 14636 ||| Sbjct 890075 ATA 890073 Score = 98.7 bits (108), Expect = 1e-15 Identities = 156/224 (70%), Gaps = 0/224 (0%) Strand=Plus/Minus Query 14226 CCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGCATCAATCCTCGttttt 14285 ||||||||||| ||| ||||| || ||||| | |||||||| | ||||| || | Sbjct 890558 CCTCATCTCTAGAAATGAGTTCATTACTGAATGTAAGGCCTGGCATAAGTCCTCTCTTCT 890499 Query 14286 ttAACCAAAATATTGCAGCGAATGATCCGGAAAAGAATATTCCCTCAACTGCAGCAAACG 14345 |||||||||| || ||||| || || |||||| || || || ||||||||||| | Sbjct 890498 TTAACCAAAAAATGGCAGCAAAACTACCACTAAAGAAAATACCTTCCACTGCAGCAAATG 890439 Query 14346 CTATTAATCGTTCTCCAAACGATGCTTTTTTGTTCGATATCCATTTTCTAGCCCATTCAG 14405 | |||| ||||| ||| | || ||| | |||||| ||| ||||| | || Sbjct 890438 CAATTACACGTTCGGGAAAGGTAGCAGTTTCATGATTTATCCAATTTAATGCCCAATTAG 890379 Query 14406 AtttttttttAATAAAATCCATTGTTTCAATAGCATTAAATAAA 14449 |||| | || | | || ||||||| |||||||||||| Sbjct 890378 CTTTTCTCGCAACACACGGCAAATTTTCAATCGCATTAAATAAA 890335 Score = 93.3 bits (102), Expect = 4e-14 Identities = 149/214 (70%), Gaps = 0/214 (0%) Strand=Plus/Minus Query 14015 CAACCTAGTTCTAATAGTAATCTATCCGCAATGAACTCAATATATTGAGACATTAAATCA 14074 ||||||| ||||| || ||||| ||||||| || ||||||||||| |||| | | | Sbjct 890872 CAACCTAATTCTACAAGCAATCTGTCCGCAACAAATTCAATATATTGGCACATGAGTTTA 890813 Query 14075 CAATTCATACCTATTAGTTTTACAGGAATTATATTGGTTAAAAATTCTTTTTCTATAGAC 14134 || ||||| ||||| | || || || | | ||||||||||||| ||| || Sbjct 890812 CAGTTCATGCCTATCATTTCAACGGGTAAAGCGTCAGTTAAAAATTCTTGTTCAATTTGG 890753 Query 14135 ACAGCCTCGTTTATAATAATCGTAATAATTTCATTAGAAGGAGGATATTTTAGATGTTTA 14194 || || || || ||||| || | |||||| ||||| | | | | |||||| Sbjct 890752 ACCGCGTCTTTAATAATTGATGTGACGCGTTCATTCGAAGGTTTCTGTATGATGTGTTTA 890693 Query 14195 AAAATTAAACACGCAAAATCACAATGAAGGCCCT 14228 || ||||| || |||||||| ||||| | |||| Sbjct 890692 AACATTAAGCATGCAAAATCGCAATGCAATCCCT 890659 Score = 91.5 bits (100), Expect = 1e-13 Identities = 82/103 (80%), Gaps = 0/103 (0%) Strand=Plus/Minus Query 13891 TTTGTTAGAAATAACGCCCATTTTTTGATATTCACTAACTCTTTTTTCAAAGAAGTTAGT 13950 |||||| | || || ||| |||||||||||| | |||| |||| || || ||||| || Sbjct 891068 TTTGTTTGCCATCACTCCCCATTTTTGATATTCTCCAACTTTTTTCTCGAAAAAGTTCGT 891009 Query 13951 TTTACCTTCCAGTGATATATTTTCCATAAAATCAAATGGATTT 13993 |||||||||| || |||| |||||| ||||| ||||||||| Sbjct 891008 CTTACCTTCCAAAGAAATATGTTCCATGAAATCGAATGGATTT 890966 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 482179395764880