Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Habropoda_20laboriosa_20[refseq_20GCF_5F001263275.1_202015-08-13] 27,566 sequences; 296,954,667 total letters Query= NC_003038.1 Length=212482 Score E Sequences producing significant alignments: (Bits) Value seq66 102 1e-16 >seq66 Length=2158695 Score = 102 bits (112), Expect = 1e-16 Identities = 141/195 (72%), Gaps = 2/195 (1%) Strand=Plus/Minus Query 19430 AAAATATATCTAGGACTTGCTGCATCTTTTCCTCCAGAAAGTCTCGTGCCAAATTGGCCA 19489 |||||||||| |||||| ||||||||||||||||| | |||||||| |||||||| ||| Sbjct 994914 AAAATATATCGAGGACTCGCTGCATCTTTTCCTCCCGTGAGTCTCGTACCAAATTGACCA 994855 Query 19490 TCCTCTTCTAAAAGAGGTATGTTATTGGCTCCAACAAAAGTTTGTGCCATTTTAATGATA 19549 | || | | | ||||||||| ||| |||||| ||||||| | ||||| ||| Sbjct 994854 TTTGGTTGAAGTATATTTATGTTATTACTTCCTACAAAATTTTGTGCAAGATTAATAATA 994795 Query 19550 GT-GTCAAATAGATTTTGTTCTCCATGTTTATAATCTGTTTTTTGTGCTACGAAAGCTCC 19608 || | || | ||| ||| ||||| | ||| ||| | || || || || | | Sbjct 994794 GTCGACATA-AGAGAAACTTCACCATGATGATACGCTGAATGTTCAGCAACAGAACCAGC 994736 Query 19609 TAATTGGGCAACTTT 19623 |||||| || ||||| Sbjct 994735 TAATTGTGCCACTTT 994721 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 679580152953120