Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Habropoda_20laboriosa_20[refseq_20GCF_5F001263275.1_202015-08-13] 27,566 sequences; 296,954,667 total letters Query= NC_003083.1 Length=118584 Score E Sequences producing significant alignments: (Bits) Value seq49 114 1e-20 >seq49 Length=1886280 Score = 114 bits (126), Expect = 1e-20 Identities = 155/216 (72%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 18110 TCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACA 18169 || |||||| | |||||||||||| ||||||||||||||||| || | | |||| | | Sbjct 1162926 TCGAAGTACAAGGTGAAGTGTTGACTCTTTTTGAATGTTGTAATCAGAGAGTGTTCTTCC 1162985 Query 18170 ATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTT 18229 |||||| | ||||||||| ||| | || | |||||| ||||| ||| | || ||||| Sbjct 1162986 ATCTTCAAGTTGTTTGCCAGCAAAAATCAATCTTTGCTGATCTGGGGGAATTCCCTCCTT 1163045 Query 18230 ATCGGCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGAT 18289 || ||||| | ||| || | | ||| || || | || || | ||| || Sbjct 1163046 GTCCTGAATTTTTGCCTTCACATTTTCAATTGTATCGGATGCTTCAACCTCGAGGGTTAT 1163105 Query 18290 GCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325 ||||||| |||||||| || ||||| || ||||| Sbjct 1163106 TGTTTTGCCAGTCAATGTCTTGACAAAGATCTGCAT 1163141 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 379216555352670