Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Habropoda_20laboriosa_20[refseq_20GCF_5F001263275.1_202015-08-13] 27,566 sequences; 296,954,667 total letters Query= NC_003094.2 Length=130759 Score E Sequences producing significant alignments: (Bits) Value seq49 100 2e-16 >seq49 Length=1886280 Score = 100 bits (110), Expect = 2e-16 Identities = 160/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 24829 ATCATGCAGATATTTGTTAAAACCTTAACCGGCAAAACGATAACCGTCGATGTCGAATCG 24888 ||||||||||| ||||| || || || || |||||||| |||||| |||| || ||| | Sbjct 1163144 ATCATGCAGATCTTTGTCAAGACATTGACTGGCAAAACAATAACCCTCGAGGTTGAAGCA 1163085 Query 24889 AGCGACAGTGTAGAAACTGTTAAGGAAAAAATTGCTGCAAAAGAAGGCGTACCGGTTGAC 24948 ||| | | |||| ||| |||| ||||||| | || || || | || || Sbjct 1163084 TCCGATACAATTGAAAATGTGAAGGCAAAAATTCAGGACAAGGAGGGAATTCCCCCAGAT 1163025 Query 24949 CAGCAACGTTTAATATATGCGGGCAAACAACTGGAAGATTCCATGACTATGAACGATTAC 25008 |||||| | || || | ||| ||||||||||| |||||| | || | |||||| Sbjct 1163024 CAGCAAAGATTGATTTTTGCTGGCAAACAACTTGAAGATGGAAGAACACTCTCTGATTAC 1162965 Query 25009 AGCATACAGAAAGAGGCCACGCTTCATTTAGTGTTACGATTGCGCGGAGG 25058 | ||| || |||||| | || ||||| | || | |||||| | || || Sbjct 1162964 AACATTCAAAAAGAGTCAACACTTCACCTTGTACTTCGATTGAGAGGTGG 1162915 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 418163466326720