Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Habropoda_20laboriosa_20[refseq_20GCF_5F001263275.1_202015-08-13]
27,566 sequences; 296,954,667 total letters
Query= NC_003310.1
Length=196858
Score E
Sequences producing significant alignments: (Bits) Value
seq59 145 1e-29
seq284 100 4e-16
>seq59
Length=4191719
Score = 145 bits (160), Expect = 1e-29
Identities = 206/288 (72%), Gaps = 4/288 (1%)
Strand=Plus/Minus
Query 62294 CTGAATGGATCCACCATCTACCATAATCCTATTCTTGATCTCATCATTCCATAATTTTCT 62353
|||||| || || || | | ||||| ||| || || || | || ||| | | |||
Sbjct 764808 CTGAATAGAACCGTTATTTGCTATAATTTCATTTTTCATGTCCTGATCCCAAAGATCTCT 764749
Query 62354 CTCGGTTAAAACTCTAAGGAGATGCGGGTTAACTACTTGGAATTCTCCAGACAATACTCT 62413
|| || | | | | | | ||| || ||||| ||||| || ||||||||||| |||||
Sbjct 764748 TTCAGTAAGATCCCGTAACAAATGAGGATTAACAACTTGAAACTCTCCAGACAAAACTCT 764689
Query 62414 CCGAGTGTAAATATTACTGGTATACGGTTCCACCGACTCATTATTTCCCAAAATTTGAGC 62473
| || ||||||||| | ||||| ||||| | |||||||||||||| |||||||| ||
Sbjct 764688 TCTTGTATAAATATTATTAGTATAGGGTTCTATGGACTCATTATTTCCTAAAATTTGCGC 764629
Query 62474 AGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTAAGACCGTATGTTCTG-- 62531
||| ||||| || ||||||||||| | || ||| |||||||| || ||||| |
Sbjct 764628 AGTAGATGCTGTTGGCATAGGTGCAATTAACAAAGAATTTCTAACTCC--ATGTTTAGCA 764571
Query 62532 ATTTTATCTTTTAGATGTTCCCAATTCCAAAGATCCGACGGTACAACA 62579
||||| || |||| | |||||| ||| | ||| | ||| ||||
Sbjct 764570 ATTTTTTCCTTTAAAGCAGCCCAATCCCATAAATCAGTTGGTGTAACA 764523
Score = 107 bits (118), Expect = 2e-18
Identities = 185/267 (69%), Gaps = 4/267 (1%)
Strand=Plus/Minus
Query 63642 CTAGACATTTGGTGACGAGTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAAC 63701
||||||||||| || | |||| | ||| ||| | || || ||||| || |||||
Sbjct 762895 CTAGACATTTGCTGTTGCTTAGTACATGCAGCAAAAAGAGTTGGTGAAGCATGTGTAAAA 762836
Query 63702 CATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATATCCCATTGATGAATT 63761
| ||| || | | ||| || || || |||||| ||| ||||| ||| ||
Sbjct 762835 TAACGTTCTGATAAGAAATTATATGTTTCTATAGCTCTGTCAATATCATCACCATGGATA 762776
Query 63762 CCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACAATTTTGTTGTTTATTTTC 63821
| ||||| || | ||||||||||||||| || || ||||||| ||| | ||| ||
Sbjct 762775 GCAACTGCAACTCTCATTAACATGTGCTGTGGCCTCTCAACAACTTTTCCATATATCTTT 762716
Query 63822 AACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA--TGAAAAGTCTCGTT 63879
|| || ||| | |||| | ||||| ||||||||||| ||||| ||||| |||| |
Sbjct 762715 AATAAATAGCTTCTTTCAAGTGTTTTGAAACCAAAATAATTGTAACTGAAA--TCTCTAT 762658
Query 63880 CGTAAATAATAACCGAATTGAGCTTAT 63906
| ||||| || | ||||| | | |||
Sbjct 762657 CATAAATTATTGCAGAATTTAACCTAT 762631
Score = 100 bits (110), Expect = 4e-16
Identities = 198/289 (69%), Gaps = 18/289 (6%)
Strand=Plus/Minus
Query 62823 GCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTTC---TGACAATT 62879
|||||||||| ||||||||||| | ||| |||||||||| | ||| ||||||||
Sbjct 764153 GCTTCTGGAACTGGATAATAATTGACATCAATAATTTTATCCAAATTATAGGTGACAATT 764094
Query 62880 ACTTTGACCACATCCTTC--AGTTTGAGAAAATCAAATCGCCCATCTA-------TTACA 62930
|| ||| | ||| ||||| ||||||||| || || |||||
Sbjct 764093 ---TTCGTCACCT--TTCGAAGTTTTTCAAAATCAAAAGTTTTAT-TAGCAGGATTTACA 764040
Query 62931 AACATGTTCAATGCAACAGATGCCAGATTACACACGGCTACCTCATTAGCATCCGCATAT 62990
||||| |||| |||| || |||| ||| || || || | |||| | | | ||
Sbjct 764039 AACATATTCACAGCAATTGAAGCCAAATTGCATACAGCAATTTCATCTGGACTGGAGTAC 763980
Query 62991 TGTATTATCTCAGTGCAAAGATTACTACACTTGATAGTTCCTAAATTTTGTTGATTACTC 63050
|||| || || ||||| | ||| ||||||||||| ||||||| |||||| |||||
Sbjct 763979 TGTACAATTTCTGTGCATAAATTGCTACACTTGATTGTTCCTATATTTTGATGATTTGAT 763920
Query 63051 TTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAA 63099
|| || || ||| |||||||| ||| | ||||| || |||||||
Sbjct 763919 TTACGATTGCAGTGATCTTTATAAAGCATGTAAGGAGTTCCTGTTTCAA 763871
Score = 96.9 bits (106), Expect = 4e-15
Identities = 119/159 (75%), Gaps = 3/159 (2%)
Strand=Plus/Minus
Query 63188 TTCGAACTCGTCTCCCCAAACATTGTCCAATCTAGGACATTCATCCGGACACATCAACGA 63247
||| || || || |||||||||| || || | |||| |||| | || ||||| || |
Sbjct 763504 TTCAAATTCATCACCCCAAACATCATCTAAACCAGGAGATTCGTGTGGGCACATTAAAGT 763445
Query 63248 CCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATA-A 63306
||| || | ||| |||||||||||||| |||||||||||||| | ||| ||| |
Sbjct 763444 CCAAATACCATTTTCCAAAACTCGTTTCATAAAAAGATCAGGAATCCATAAAGC-ATAGA 763386
Query 63307 ATAGATCTCTTGTTCTATGTTCCTCGTTTCCTG-TATTC 63344
||| ||||||| ||||| ||| || || |||| |||||
Sbjct 763385 ATAATTCTCTTGCTCTATTTTCTTCTTTACCTGTTATTC 763347
>seq284
Length=1419496
Score = 100 bits (110), Expect = 4e-16
Identities = 87/108 (81%), Gaps = 0/108 (0%)
Strand=Plus/Minus
Query 34068 TTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATATTC 34127
||||| | || ||||| |||||||||||||| || || ||||| ||||| ||||| | |
Sbjct 889928 TTAGAAAGGTCTACTTCCTCCACTGTCCAAAAGGAGGCTTCTGCTTTTTTGTACATTTGC 889869
Query 34128 CAGATGTCATGATATTGGATTGGGAAAATAACAAATCTATTTGGATTT 34175
|| |||||| | ||||||| || |||| |||||||||| |||||||
Sbjct 889868 CAAATGTCAGGCCATTGGATAGGAAAAACAACAAATCTACGTGGATTT 889821
Score = 96.9 bits (106), Expect = 4e-15
Identities = 148/211 (70%), Gaps = 0/211 (0%)
Strand=Plus/Minus
Query 33396 CCCAATTCAGAAATCAATCTATCTGCGACGAATTCTATATATGTTTTCATCATTTCACAA 33455
|| ||||| || |||||| || || || ||||| |||||| ||| | || |||
Sbjct 890869 CCTAATTCTACAAGCAATCTGTCCGCAACAAATTCAATATATTGGCACATGAGTTTACAG 890810
Query 33456 TTCATTCCTATGAGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATGGATACC 33515
||||| ||||| | || ||| || | ||| |||| | ||||||||||||||| |||
Sbjct 890809 TTCATGCCTATCATTTCAACGGGTAAAGCGTCAGTTAAAAATTCTTGTTCAATTTGGACC 890750
Query 33516 GCATTTGTTATAATAAATCTAACGGTTTCTTCACTCGGTGGATGTAATAAATGTTTAAAC 33575
|| | | | ||||| || | ||| ||| | ||| |||| | |||||||||
Sbjct 890749 GCGTCTTTAATAATTGATGTGACGCGTTCATTCGAAGGTTTCTGTATGATGTGTTTAAAC 890690
Query 33576 ATCAAACATGCGAAATCGCAGTGCAGACCCT 33606
|| || ||||| |||||||| |||| ||||
Sbjct 890689 ATTAAGCATGCAAAATCGCAATGCAATCCCT 890659
Score = 86.0 bits (94), Expect = 8e-12
Identities = 103/138 (75%), Gaps = 3/138 (2%)
Strand=Plus/Minus
Query 33236 TTAAAAGTCAACATCTAAAGAAAAATGATTGTCT-TCTTGA--GACATAACTCCCATTTT 33292
|||||||||| ||| | | ||||| | ||| | ||| | ||| |||||| |||
Sbjct 891104 TTAAAAGTCAGCATTAACTGTAAAATTGCTCTCTATTTTGTTTGCCATCACTCCCCATTT 891045
Query 33293 TTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATGATATATTTTC 33352
||| ||||| || || ||| |||||||| || || || |||||||| || |||| |||
Sbjct 891044 TTGATATTCTCCAACTTTTTTCTCGAAAAAGTTCGTCTTACCTTCCAAAGAAATATGTTC 890985
Query 33353 CATGAAATCAAACGGATT 33370
||||||||| || |||||
Sbjct 890984 CATGAAATCGAATGGATT 890967
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 629600580600480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |