Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Habropoda_20laboriosa_20[refseq_20GCF_5F001263275.1_202015-08-13]
27,566 sequences; 296,954,667 total letters
Query= NC_003389.1
Length=146454
Score E
Sequences producing significant alignments: (Bits) Value
seq59 194 2e-44
seq284 131 2e-25
>seq59
Length=4191719
Score = 194 bits (214), Expect = 2e-44
Identities = 231/310 (75%), Gaps = 4/310 (1%)
Strand=Plus/Minus
Query 37045 TGAATAGAACCATTATGTAACACAATTGTATTCTTTATGTCATTATTCCACATATTTCTA 37104
||||||||||| |||| | | |||| ||| || ||||| | || ||| | || |||
Sbjct 764807 TGAATAGAACCGTTATTTGCTATAATTTCATTTTTCATGTCCTGATCCCAAAGATCTCTT 764748
Query 37105 CTTATTAGTTCTCTCAATAGGTGTGGATTTACAACCTGAAAATCTCCAGATAATACTCTT 37164
| || || | || | || ||||| ||||| ||||| |||||||| || ||||||
Sbjct 764747 TCAGTAAGATCCCGTAACAAATGAGGATTAACAACTTGAAACTCTCCAGACAAAACTCTT 764688
Query 37165 CTTGTATATATATTGCTAGTATATGGTTCAATGGACTCATTATTACTTAATATTTGAGAT 37224
|||||||| ||||| ||||||| ||||| |||||||||||||| | ||| ||||| |
Sbjct 764687 CTTGTATAAATATTATTAGTATAGGGTTCTATGGACTCATTATTTCCTAAAATTTGCGCA 764628
Query 37225 GTAGATGCAGTAGGCATTGGTGCTATTAGAAGGCTATTTCTCAATCCATGTGTATTAATT 37284
|||||||| || ||||| ||||| |||| | |||||| | ||||||| || ||||
Sbjct 764627 GTAGATGCTGTTGGCATAGGTGCAATTAACAAAGAATTTCTAACTCCATGTTTAGCAATT 764568
Query 37285 CTCTTTTTTAGTTCATTCCAATCCCATAAATCTGTTGG-GT-TCTTTAACCACATATCAT 37342
| | |||| || ||||||||||||||| ||||| || | || ||||||||| |
Sbjct 764567 TTTTCCTTTAAAGCAGCCCAATCCCATAAATCAGTTGGTGTAACATT--CCACATATCGT 764510
Query 37343 ATTGTAGAAT 37352
|||||| |||
Sbjct 764509 ATTGTAAAAT 764500
Score = 140 bits (154), Expect = 3e-28
Identities = 214/301 (71%), Gaps = 3/301 (1%)
Strand=Plus/Minus
Query 38095 TTTCTTAAGCTTAGAAAAT-CGAATATATCAGCGTGCCATGGTTCTATATAAATCGACAT 38153
||| ||||| | ||||| | || || || || ||||||||||||| ||| | | |
Sbjct 763277 TTTTTTAAGGTCCAAAAATTCAAAAATGTCTGCATGCCATGGTTCTAAATATAGGGCAAA 763218
Query 38154 TGCTCCTGGTCTTTTATCACCTCCCTGATTAATATATCTAACTGTGTTATTATATATTCT 38213
||||||||||||||||| ||||| |||| || ||||| | | || |||||||||| |||
Sbjct 763217 TGCTCCTGGTCTTTTATTCCCTCCTTGATCAACATATCGAGCAGTATTATTATATACTCT 763158
Query 38214 TAACATAGGTACTATACCATTAGATTTGCCGTTTATACCGGATATATAAGTACCCTTAGC 38273
| ||| || |||| |||||||||| || | |||| ||| ||||| || ||
Sbjct 763157 AATCATTGGAACTAAACCATTAGATACACCAAATGTACCACCTATTGGTGTACCTTTTGC 763098
Query 38274 TCGTATATTACTTATCGACAATCCTATTCCACCTGCATGTTTTGAT-ATTAAAGCGCATT 38332
||| ||| | ||| | ||| || ||||| ||| | |||| | |||| || |||
Sbjct 763097 TCGAATACAATGTATGTTAAGTCCAATACCACCAGCA-GATTTGCTAATTAGTGCACATC 763039
Query 38333 GTTTTAACGTATCAAATATACCTTCTATACTGTCATCCTTTATTGGTAGTATAAAACAAC 38392
||||| |||||| | || ||||| || || || | |||| ||||| ||||||||
Sbjct 763038 TCTTTAATGTATCATAAATTCCTTCAATGCTATCTGAACTCATTGTTAGTAGAAAACAAC 762979
Query 38393 T 38393
|
Sbjct 762978 T 762978
Score = 100 bits (110), Expect = 3e-16
Identities = 127/174 (73%), Gaps = 8/174 (5%)
Strand=Plus/Minus
Query 36864 CCATCCGTAAAAATGCATACTGGTCAGTTTTGCGTATGTAGGATTATCTATATATATTGT 36923
|||||||||||||||||| || |||||| | ||| || ||| | |||| |
Sbjct 765083 CCATCCGTAAAAATGCATTGAAGTTAGTTTTTCTGTTGTTGGTTTAGCCATATGAA---- 765028
Query 36924 CATTGATTGACT----TTGATCTATAAACGCACCTCTGTCGGCTGCCATTTCTAAAATAC 36979
|||| | ||||| |||||||||||| ||||| | ||||||||||| | ||| ||
Sbjct 765027 CATTTAATGACTGCGATTGATCTATAAAGGCACCACGATCGGCTGCCATCTTTAAGATTA 764968
Query 36980 ATTTTTGAGATATCTCCCAAACCGTTTTATATATTTGTTTTATATTATCTGGTA 37033
|||||| ||||| |||||||| |||||||| | ||||| || || ||||
Sbjct 764967 TTTTTTGTGATATTTCCCAAACTGTTTTATAAAGCATTTTTAAATCATTCGGTA 764914
Score = 86.0 bits (94), Expect = 6e-12
Identities = 209/317 (66%), Gaps = 6/317 (2%)
Strand=Plus/Minus
Query 37582 ACTGGATAATAATTGATATCTATTATTTTATTTAGATTTTTAACTAGTATTTTCGTAATT 37641
|||||||||||||||| ||| || ||||||| | ||| | | |||||||| |
Sbjct 764144 ACTGGATAATAATTGACATCAATAATTTTATCCAAATTATAGGTGACAATTTTCGTCACC 764085
Query 37642 ATTCTCAACTTGTCGAACATAAATACGTTATT------ATTAACAAATTTACTCAACGAA 37695
||| | || || || ||| ||||| ||| ||||| || ||| | |
Sbjct 764084 TTTCGAAGTTTTTCAAAATCAAAAGTTTTATTAGCAGGATTTACAAACATATTCACAGCA 764025
Query 37696 ATAGATCCTAGATTACATACAGCAACTTCATCTTCGTTACTAAATTGTATAATCTCTGTA 37755
|| || | | ||| |||||||||| ||||||| | | |||| ||| |||||
Sbjct 764024 ATTGAAGCCAAATTGCATACAGCAATTTCATCTGGACTGGAGTACTGTACAATTTCTGTG 763965
Query 37756 CAGAGATTACTCGATCTAATTGTTCCCAAATTGCTTTGATTGGATTTTTTATTACAAGAA 37815
|| | ||| || | | |||||||| | ||| ||||| ||||| ||| || |
Sbjct 763964 CATAAATTGCTACACTTGATTGTTCCTATATTTTGATGATTTGATTTACGATTGCAGTGA 763905
Query 37816 TCTTTATATAGTATATACGGCGTTCCTTGTTCTATTTGAGCCTCGATAATAGATTTCCAT 37875
|||||||| || || || || |||||| ||| | ||| ||| | ||||| | ||||
Sbjct 763904 TCTTTATAAAGCATGTAAGGAGTTCCTGTTTCAACTTGGGCCATAAGAATAGCTGTCCAC 763845
Query 37876 AAACTTCTTGCTTTAAC 37892
|| ||| |||| |||
Sbjct 763844 AAGTCTCTGGCTTGAAC 763828
>seq284
Length=1419496
Score = 131 bits (144), Expect = 2e-25
Identities = 170/235 (72%), Gaps = 0/235 (0%)
Strand=Plus/Minus
Query 11880 TTTCTATATTATCTCTTACATATGTATCTATTAATAAACTATACATTTCTGAATGAATAT 11939
||||| || |||| | ||||||||| ||||| ||| ||||||||||| || | ||
Sbjct 890252 TTTCTTTAGCATCTGCAATATATGTATCGATTAACAAAGAGTACATTTCTGAGTGCACAT 890193
Query 11940 TTTCCATAGCTATTTGAAATCCATAGAAACATCGTGCCTCTGAACACTGTACATCCACAT 11999
||||||| || | |||||| ||||| || || |||||||||| || || |||
Sbjct 890192 TTTCCATTGCAACTTGAAAGCCATAAAAGCAACGTGCCTCTGTTATTTGCACCTCCTGGC 890133
Query 12000 AAAATCTTTCCGCTAAATTCTCATTTACAATACCATCACTAGATGCAAAAAATGCTAGTA 12059
||||| ||| | | ||| ||||| ||||| |||||| || ||||||||||||| ||
Sbjct 890132 TAAATCGTTCAACAAGATTTTCATTGACAATTCCATCAGAAGCAGCAAAAAATGCTAATA 890073
Query 12060 TATGTTTTATAAAGTATTTTTCGTCTTTAGTTAATTTATCCCAATCATCTAAATC 12114
|||| |||||| | ||| || ||||||| | | ||| ||| ||||||
Sbjct 890072 CATGTGATATAAATTTTTTCTCACTGATAGTTAAACTGTTCCAGTCAAATAAATC 890018
Score = 87.8 bits (96), Expect = 2e-12
Identities = 152/221 (69%), Gaps = 0/221 (0%)
Strand=Plus/Minus
Query 11432 ACTTTTTCACAACCTAACTCTGTTAATAATCTATCTGCGACGAATTCTATATACTGAGAC 11491
|| |||| |||||||| ||| | ||||| || || || ||||| ||||| || ||
Sbjct 890881 ACCTTTTGGCAACCTAATTCTACAAGCAATCTGTCCGCAACAAATTCAATATATTGGCAC 890822
Query 11492 ATTAAACAACAATTCATACCTATAAGATCCACCGGAATAGCAACTGTCAAAAACTCCTTT 11551
|| | ||| ||||| ||||| | || || || | ||| | || ||||| || | |
Sbjct 890821 ATGAGTTTACAGTTCATGCCTATCATTTCAACGGGTAAAGCGTCAGTTAAAAATTCTTGT 890762
Query 11552 TCTATATTAACCGCATCAATGATTATCGACGTTATAACTTCCTTAGATGGTGGATGTAAT 11611
|| || | ||||| || | || || || || | ||| || || ||| ||||
Sbjct 890761 TCAATTTGGACCGCGTCTTTAATAATTGATGTGACGCGTTCATTCGAAGGTTTCTGTATG 890702
Query 11612 AAATGTTTAAACATTAAACACGCAAAATCACAATGTAAACC 11652
| |||||||||||||| || |||||||| ||||| || ||
Sbjct 890701 ATGTGTTTAAACATTAAGCATGCAAAATCGCAATGCAATCC 890661
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 468363358067040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |