Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Habropoda_20laboriosa_20[refseq_20GCF_5F001263275.1_202015-08-13] 27,566 sequences; 296,954,667 total letters Query= NC_003391.1 Length=205719 Score E Sequences producing significant alignments: (Bits) Value seq59 161 1e-34 seq284 104 3e-17 >seq59 Length=4191719 Score = 161 bits (178), Expect = 1e-34 Identities = 202/275 (73%), Gaps = 4/275 (1%) Strand=Plus/Minus Query 65087 CTGAATGGATCCACCATCTGCCATAATCCTATTCTTGATCTCATCATTCCATAATTTTCT 65146 |||||| || || || ||| ||||| ||| || || || | || ||| | | ||| Sbjct 764808 CTGAATAGAACCGTTATTTGCTATAATTTCATTTTTCATGTCCTGATCCCAAAGATCTCT 764749 Query 65147 CTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAAATTCTCCAGACAATACTCT 65206 || || | | | | | | ||| |||||||| |||||||| ||||||||||| ||||| Sbjct 764748 TTCAGTAAGATCCCGTAACAAATGAGGATTAACAACTTGAAACTCTCCAGACAAAACTCT 764689 Query 65207 CCGAGTGTAAATATTACTGGTATACGGTTCCACAGACTCATTATTTCCCAAAATTTGAGC 65266 | || ||||||||| | ||||| ||||| | |||||||||||||| |||||||| || Sbjct 764688 TCTTGTATAAATATTATTAGTATAGGGTTCTATGGACTCATTATTTCCTAAAATTTGCGC 764629 Query 65267 AGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTAAGACCGTATGTTCTG-- 65324 ||| ||||| || ||||||||||| | || ||| |||||||| || ||||| | Sbjct 764628 AGTAGATGCTGTTGGCATAGGTGCAATTAACAAAGAATTTCTAACTCC--ATGTTTAGCA 764571 Query 65325 ATTTTATCTTTTAGAGGTTCCCAATTCCAAAGATC 65359 ||||| || |||| || |||||| ||| | ||| Sbjct 764570 ATTTTTTCCTTTAAAGCAGCCCAATCCCATAAATC 764536 Score = 105 bits (116), Expect = 9e-18 Identities = 243/362 (67%), Gaps = 18/362 (5%) Strand=Plus/Minus Query 65616 GCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTTC---TGACAATT 65672 |||||||||| ||||||||||| | ||| |||||||||| | ||| |||||||| Sbjct 764153 GCTTCTGGAACTGGATAATAATTGACATCAATAATTTTATCCAAATTATAGGTGACAATT 764094 Query 65673 ACTTTGACCACATCCTTC--AGTTTGAGAAAATCAAATCGCTCATCTA-------TTACA 65723 || ||| | ||| ||||| ||||||||| | || || ||||| Sbjct 764093 ---TTCGTCACCT--TTCGAAGTTTTTCAAAATCAAAAGTTTTAT-TAGCAGGATTTACA 764040 Query 65724 AACATGTTCAATGCAACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATAT 65783 ||||| |||| |||| || |||| ||| || || || | |||| | | | || Sbjct 764039 AACATATTCACAGCAATTGAAGCCAAATTGCATACAGCAATTTCATCTGGACTGGAGTAC 763980 Query 65784 TGTATTATCTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTC 65843 |||| || || ||||| | ||| ||||||||||| ||||||| |||||| ||||| Sbjct 763979 TGTACAATTTCTGTGCATAAATTGCTACACTTGATTGTTCCTATATTTTGATGATTTGAT 763920 Query 65844 TTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCT 65903 || || || ||| |||||||| ||| | ||||| || ||||||| || | Sbjct 763919 TTACGATTGCAGTGATCTTTATAAAGCATGTAAGGAGTTCCTGTTTCAACTTGGGCCATA 763860 Query 65904 ATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAGATTTGTATCTCTTTTCTCTTTCG 65963 | ||| ||| |||| | | ||| || | | | | ||| ||||| ||||| |||| Sbjct 763859 AGAATAGCTGTCCACAAGTCTCTGGCTTGAACTTGACGTTTATATCTTTTTTCGTTTTCA 763800 Query 65964 TA 65965 || Sbjct 763799 TA 763798 Score = 100 bits (110), Expect = 4e-16 Identities = 120/159 (75%), Gaps = 3/159 (2%) Strand=Plus/Minus Query 65981 TTCGAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACATCAACGA 66040 ||| || || || |||||||||| || || |||||| |||| | || ||||| || | Sbjct 763504 TTCAAATTCATCACCCCAAACATCATCTAAACCAGGAGATTCGTGTGGGCACATTAAAGT 763445 Query 66041 CCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATA-A 66099 ||| || | ||| |||||||||||||| |||||||||||||| | ||| ||| | Sbjct 763444 CCAAATACCATTTTCCAAAACTCGTTTCATAAAAAGATCAGGAATCCATAAAGC-ATAGA 763386 Query 66100 ATAAATCTCTGGTTCTATGTTCCTCGTTTCCTG-TATTC 66137 |||| ||||| | ||||| ||| || || |||| ||||| Sbjct 763385 ATAATTCTCTTGCTCTATTTTCTTCTTTACCTGTTATTC 763347 Score = 95.1 bits (104), Expect = 2e-14 Identities = 172/250 (69%), Gaps = 4/250 (2%) Strand=Plus/Minus Query 66435 CTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAAC 66494 ||||||||||| || | |||| | ||| ||| | || || ||||| || ||||| Sbjct 762895 CTAGACATTTGCTGTTGCTTAGTACATGCAGCAAAAAGAGTTGGTGAAGCATGTGTAAAA 762836 Query 66495 CATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATATCCCATTGATGAATT 66554 | ||| || | | ||| || || || |||||| ||| ||||| ||| || Sbjct 762835 TAACGTTCTGATAAGAAATTATATGTTTCTATAGCTCTGTCAATATCATCACCATGGATA 762776 Query 66555 CCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTC 66614 | ||||| || | ||||||||||||||| || || ||||| | || | ||| || Sbjct 762775 GCAACTGCAACTCTCATTAACATGTGCTGTGGCCTCTCAACAACTTTTCCATATATCTTT 762716 Query 66615 AACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA--TGAAAAGTCTCGTT 66672 || || ||| | |||| | ||||| ||||||||||| ||||| ||||| |||| | Sbjct 762715 AATAAATAGCTTCTTTCAAGTGTTTTGAAACCAAAATAATTGTAACTGAAA--TCTCTAT 762658 Query 66673 CGTAAATAAT 66682 | ||||| || Sbjct 762657 CATAAATTAT 762648 >seq284 Length=1419496 Score = 104 bits (114), Expect = 3e-17 Identities = 163/232 (70%), Gaps = 6/232 (3%) Strand=Plus/Minus Query 35954 TTATAAAtttttttAAATCCCAATTCAGAAATCAATCTATCTGCGACAAATTCTATATAT 36013 ||| ||| |||| | || ||||| || |||||| || || |||||||| |||||| Sbjct 890887 TTACAAACCTTTTGGCAACCTAATTCTACAAGCAATCTGTCCGCAACAAATTCAATATAT 890828 Query 36014 GTTTTCATCATTTCACAATTCATTCCTATAAGTTTAACTGGAAGAGCCACAGTAAGAAAT 36073 ||| | || ||| ||||| ||||| | || ||| || | ||| |||| | |||| Sbjct 890827 TGGCACATGAGTTTACAGTTCATGCCTATCATTTCAACGGGTAAAGCGTCAGTTAAAAAT 890768 Query 36074 TCTTGTTCAATAGAGACCGCGTCTGTTATAATAGATATTACTGTTTCTTCACTCGGTGGA 36133 ||||||||||| |||||||||| | ||||| ||| | || |||| ||| || Sbjct 890767 TCTTGTTCAATTTGGACCGCGTCTTTAATAATTGATGTGAC---GCGTTCATTCGAAGGT 890711 Query 36134 TAC---AATAAATGTTTAAACATCAAACATGCGAAATCGCAGTGTAGACCCT 36182 | | | | ||||||||||| || ||||| |||||||| || | |||| Sbjct 890710 TTCTGTATGATGTGTTTAAACATTAAGCATGCAAAATCGCAATGCAATCCCT 890659 Score = 100 bits (110), Expect = 4e-16 Identities = 97/125 (78%), Gaps = 0/125 (0%) Strand=Plus/Minus Query 36644 TTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATATTC 36703 ||||| | || ||||| |||||||||||||| || || ||||| ||||| ||||| | | Sbjct 889928 TTAGAAAGGTCTACTTCCTCCACTGTCCAAAAGGAGGCTTCTGCTTTTTTGTACATTTGC 889869 Query 36704 CAGATGTCATGATATTGAATTGGAAAAATAACAAATCTATTTTGATTTTTTGCAAGGATT 36763 || |||||| | |||| || ||||||| |||||||||| | |||||| | || | | Sbjct 889868 CAAATGTCAGGCCATTGGATAGGAAAAACAACAAATCTACGTGGATTTTCTTTTAGCAGT 889809 Query 36764 GGTTC 36768 ||||| Sbjct 889808 GGTTC 889804 Score = 91.5 bits (100), Expect = 2e-13 Identities = 76/93 (82%), Gaps = 0/93 (0%) Strand=Plus/Minus Query 35854 CATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTACCTTC 35913 ||| |||||| |||||| ||||| || || ||| |||||||| || || |||||||| Sbjct 891059 CATCACTCCCCATTTTTGATATTCTCCAACTTTTTTCTCGAAAAAGTTCGTCTTACCTTC 891000 Query 35914 TAATGATATATTTTCCATGAAATCGAATGGATT 35946 || || |||| ||||||||||||||||||||| Sbjct 890999 CAAAGAAATATGTTCCATGAAATCGAATGGATT 890967 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 657946010107440