Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Habropoda_20laboriosa_20[refseq_20GCF_5F001263275.1_202015-08-13]
27,566 sequences; 296,954,667 total letters
Query= NC_003391.1
Length=205719
Score E
Sequences producing significant alignments: (Bits) Value
seq59 161 1e-34
seq284 104 3e-17
>seq59
Length=4191719
Score = 161 bits (178), Expect = 1e-34
Identities = 202/275 (73%), Gaps = 4/275 (1%)
Strand=Plus/Minus
Query 65087 CTGAATGGATCCACCATCTGCCATAATCCTATTCTTGATCTCATCATTCCATAATTTTCT 65146
|||||| || || || ||| ||||| ||| || || || | || ||| | | |||
Sbjct 764808 CTGAATAGAACCGTTATTTGCTATAATTTCATTTTTCATGTCCTGATCCCAAAGATCTCT 764749
Query 65147 CTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAAATTCTCCAGACAATACTCT 65206
|| || | | | | | | ||| |||||||| |||||||| ||||||||||| |||||
Sbjct 764748 TTCAGTAAGATCCCGTAACAAATGAGGATTAACAACTTGAAACTCTCCAGACAAAACTCT 764689
Query 65207 CCGAGTGTAAATATTACTGGTATACGGTTCCACAGACTCATTATTTCCCAAAATTTGAGC 65266
| || ||||||||| | ||||| ||||| | |||||||||||||| |||||||| ||
Sbjct 764688 TCTTGTATAAATATTATTAGTATAGGGTTCTATGGACTCATTATTTCCTAAAATTTGCGC 764629
Query 65267 AGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTAAGACCGTATGTTCTG-- 65324
||| ||||| || ||||||||||| | || ||| |||||||| || ||||| |
Sbjct 764628 AGTAGATGCTGTTGGCATAGGTGCAATTAACAAAGAATTTCTAACTCC--ATGTTTAGCA 764571
Query 65325 ATTTTATCTTTTAGAGGTTCCCAATTCCAAAGATC 65359
||||| || |||| || |||||| ||| | |||
Sbjct 764570 ATTTTTTCCTTTAAAGCAGCCCAATCCCATAAATC 764536
Score = 105 bits (116), Expect = 9e-18
Identities = 243/362 (67%), Gaps = 18/362 (5%)
Strand=Plus/Minus
Query 65616 GCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTTC---TGACAATT 65672
|||||||||| ||||||||||| | ||| |||||||||| | ||| ||||||||
Sbjct 764153 GCTTCTGGAACTGGATAATAATTGACATCAATAATTTTATCCAAATTATAGGTGACAATT 764094
Query 65673 ACTTTGACCACATCCTTC--AGTTTGAGAAAATCAAATCGCTCATCTA-------TTACA 65723
|| ||| | ||| ||||| ||||||||| | || || |||||
Sbjct 764093 ---TTCGTCACCT--TTCGAAGTTTTTCAAAATCAAAAGTTTTAT-TAGCAGGATTTACA 764040
Query 65724 AACATGTTCAATGCAACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATAT 65783
||||| |||| |||| || |||| ||| || || || | |||| | | | ||
Sbjct 764039 AACATATTCACAGCAATTGAAGCCAAATTGCATACAGCAATTTCATCTGGACTGGAGTAC 763980
Query 65784 TGTATTATCTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTC 65843
|||| || || ||||| | ||| ||||||||||| ||||||| |||||| |||||
Sbjct 763979 TGTACAATTTCTGTGCATAAATTGCTACACTTGATTGTTCCTATATTTTGATGATTTGAT 763920
Query 65844 TTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCT 65903
|| || || ||| |||||||| ||| | ||||| || ||||||| || |
Sbjct 763919 TTACGATTGCAGTGATCTTTATAAAGCATGTAAGGAGTTCCTGTTTCAACTTGGGCCATA 763860
Query 65904 ATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAGATTTGTATCTCTTTTCTCTTTCG 65963
| ||| ||| |||| | | ||| || | | | | ||| ||||| ||||| ||||
Sbjct 763859 AGAATAGCTGTCCACAAGTCTCTGGCTTGAACTTGACGTTTATATCTTTTTTCGTTTTCA 763800
Query 65964 TA 65965
||
Sbjct 763799 TA 763798
Score = 100 bits (110), Expect = 4e-16
Identities = 120/159 (75%), Gaps = 3/159 (2%)
Strand=Plus/Minus
Query 65981 TTCGAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACATCAACGA 66040
||| || || || |||||||||| || || |||||| |||| | || ||||| || |
Sbjct 763504 TTCAAATTCATCACCCCAAACATCATCTAAACCAGGAGATTCGTGTGGGCACATTAAAGT 763445
Query 66041 CCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATA-A 66099
||| || | ||| |||||||||||||| |||||||||||||| | ||| ||| |
Sbjct 763444 CCAAATACCATTTTCCAAAACTCGTTTCATAAAAAGATCAGGAATCCATAAAGC-ATAGA 763386
Query 66100 ATAAATCTCTGGTTCTATGTTCCTCGTTTCCTG-TATTC 66137
|||| ||||| | ||||| ||| || || |||| |||||
Sbjct 763385 ATAATTCTCTTGCTCTATTTTCTTCTTTACCTGTTATTC 763347
Score = 95.1 bits (104), Expect = 2e-14
Identities = 172/250 (69%), Gaps = 4/250 (2%)
Strand=Plus/Minus
Query 66435 CTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAAC 66494
||||||||||| || | |||| | ||| ||| | || || ||||| || |||||
Sbjct 762895 CTAGACATTTGCTGTTGCTTAGTACATGCAGCAAAAAGAGTTGGTGAAGCATGTGTAAAA 762836
Query 66495 CATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATATCCCATTGATGAATT 66554
| ||| || | | ||| || || || |||||| ||| ||||| ||| ||
Sbjct 762835 TAACGTTCTGATAAGAAATTATATGTTTCTATAGCTCTGTCAATATCATCACCATGGATA 762776
Query 66555 CCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTC 66614
| ||||| || | ||||||||||||||| || || ||||| | || | ||| ||
Sbjct 762775 GCAACTGCAACTCTCATTAACATGTGCTGTGGCCTCTCAACAACTTTTCCATATATCTTT 762716
Query 66615 AACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA--TGAAAAGTCTCGTT 66672
|| || ||| | |||| | ||||| ||||||||||| ||||| ||||| |||| |
Sbjct 762715 AATAAATAGCTTCTTTCAAGTGTTTTGAAACCAAAATAATTGTAACTGAAA--TCTCTAT 762658
Query 66673 CGTAAATAAT 66682
| ||||| ||
Sbjct 762657 CATAAATTAT 762648
>seq284
Length=1419496
Score = 104 bits (114), Expect = 3e-17
Identities = 163/232 (70%), Gaps = 6/232 (3%)
Strand=Plus/Minus
Query 35954 TTATAAAtttttttAAATCCCAATTCAGAAATCAATCTATCTGCGACAAATTCTATATAT 36013
||| ||| |||| | || ||||| || |||||| || || |||||||| ||||||
Sbjct 890887 TTACAAACCTTTTGGCAACCTAATTCTACAAGCAATCTGTCCGCAACAAATTCAATATAT 890828
Query 36014 GTTTTCATCATTTCACAATTCATTCCTATAAGTTTAACTGGAAGAGCCACAGTAAGAAAT 36073
||| | || ||| ||||| ||||| | || ||| || | ||| |||| | ||||
Sbjct 890827 TGGCACATGAGTTTACAGTTCATGCCTATCATTTCAACGGGTAAAGCGTCAGTTAAAAAT 890768
Query 36074 TCTTGTTCAATAGAGACCGCGTCTGTTATAATAGATATTACTGTTTCTTCACTCGGTGGA 36133
||||||||||| |||||||||| | ||||| ||| | || |||| ||| ||
Sbjct 890767 TCTTGTTCAATTTGGACCGCGTCTTTAATAATTGATGTGAC---GCGTTCATTCGAAGGT 890711
Query 36134 TAC---AATAAATGTTTAAACATCAAACATGCGAAATCGCAGTGTAGACCCT 36182
| | | | ||||||||||| || ||||| |||||||| || | ||||
Sbjct 890710 TTCTGTATGATGTGTTTAAACATTAAGCATGCAAAATCGCAATGCAATCCCT 890659
Score = 100 bits (110), Expect = 4e-16
Identities = 97/125 (78%), Gaps = 0/125 (0%)
Strand=Plus/Minus
Query 36644 TTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATATTC 36703
||||| | || ||||| |||||||||||||| || || ||||| ||||| ||||| | |
Sbjct 889928 TTAGAAAGGTCTACTTCCTCCACTGTCCAAAAGGAGGCTTCTGCTTTTTTGTACATTTGC 889869
Query 36704 CAGATGTCATGATATTGAATTGGAAAAATAACAAATCTATTTTGATTTTTTGCAAGGATT 36763
|| |||||| | |||| || ||||||| |||||||||| | |||||| | || | |
Sbjct 889868 CAAATGTCAGGCCATTGGATAGGAAAAACAACAAATCTACGTGGATTTTCTTTTAGCAGT 889809
Query 36764 GGTTC 36768
|||||
Sbjct 889808 GGTTC 889804
Score = 91.5 bits (100), Expect = 2e-13
Identities = 76/93 (82%), Gaps = 0/93 (0%)
Strand=Plus/Minus
Query 35854 CATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTACCTTC 35913
||| |||||| |||||| ||||| || || ||| |||||||| || || ||||||||
Sbjct 891059 CATCACTCCCCATTTTTGATATTCTCCAACTTTTTTCTCGAAAAAGTTCGTCTTACCTTC 891000
Query 35914 TAATGATATATTTTCCATGAAATCGAATGGATT 35946
|| || |||| |||||||||||||||||||||
Sbjct 890999 CAAAGAAATATGTTCCATGAAATCGAATGGATT 890967
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 657946010107440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |