Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Habropoda_20laboriosa_20[refseq_20GCF_5F001263275.1_202015-08-13]
27,566 sequences; 296,954,667 total letters
Query= NC_004002.1
Length=149955
Score E
Sequences producing significant alignments: (Bits) Value
seq284 104 2e-17
>seq284
Length=1419496
Score = 104 bits (114), Expect = 2e-17
Identities = 170/241 (71%), Gaps = 3/241 (1%)
Strand=Plus/Minus
Query 14122 CCTTCTCTTTAGTACTTGAAATGTATGTATCAATAAGTAAGCTATACATTTCAGAGTGTA 14181
|||| ||||||| | || ||| |||||||| || | || |||||||| ||||| |
Sbjct 890254 CCTT-TCTTTAGCATCTGCAATATATGTATCGATTAACAAAGAGTACATTTCTGAGTGCA 890196
Query 14182 TGTTTTCCATAGCTATCTGAAAACCATAAAAGCATCTAGCTTCCGACCATTGTACTTCCG 14241
|||||||| || | ||||| ||||||||||| | || || | ||| || |||
Sbjct 890195 CATTTTCCATTGCAACTTGAAAGCCATAAAAGCAACGTGCCTCTGTTATTTGCACCTCCT 890136
Query 14242 AGTAAAATCTTTCGGCCAAATTTTCATTAACTATACCATCACTAGCTGCAAAAAATGCCA 14301
| ||||| ||| | | ||||||||| || || |||||| ||| ||||||||||| |
Sbjct 890135 GGCTAAATCGTTCAACAAGATTTTCATTGACAATTCCATCAGAAGCAGCAAAAAATGCTA 890076
Query 14302 ATATGTTTTTAATAAAGTATTGCTC-TTCATTGTTGAGTTTTTTCCAATCGGATAAATCC 14360
||| | | ||||| | || ||| | || ||| | | ||||| || ||||||||
Sbjct 890075 ATACATGTGATATAAATTTTTTCTCACTGATAGTT-AAACTGTTCCAGTCAAATAAATCC 890017
Query 14361 T 14361
|
Sbjct 890016 T 890016
Score = 104 bits (114), Expect = 2e-17
Identities = 161/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 13894 CCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGCATCAATCCTCGttttt 13953
||||||||||| ||| ||||| || ||||| | |||||||| | ||||| || |
Sbjct 890558 CCTCATCTCTAGAAATGAGTTCATTACTGAATGTAAGGCCTGGCATAAGTCCTCTCTTCT 890499
Query 13954 ttAACCAAAATATTGCAGCAAATGACCCGGAAAAGAATATTCCCTCAACTGCAGCAAACG 14013
|||||||||| || |||||||| || |||||| || || || ||||||||||| |
Sbjct 890498 TTAACCAAAAAATGGCAGCAAAACTACCACTAAAGAAAATACCTTCCACTGCAGCAAATG 890439
Query 14014 CTATTAATCGTTCTCCAAACGATGCTTTTTTGTTCGATATCCATTTTCTAGCCCATTCAG 14073
| |||| ||||| ||| | || ||| | |||||| ||| ||||| | ||
Sbjct 890438 CAATTACACGTTCGGGAAAGGTAGCAGTTTCATGATTTATCCAATTTAATGCCCAATTAG 890379
Query 14074 AtttttttttAATAAAATCCATTGTTTCAATAGCATTAAATAAATATTCC 14123
|||| | || | | || ||||||| |||||||||||| | |||
Sbjct 890378 CTTTTCTCGCAACACACGGCAAATTTTCAATCGCATTAAATAAAAAGTCC 890329
Score = 98.7 bits (108), Expect = 1e-15
Identities = 150/214 (70%), Gaps = 0/214 (0%)
Strand=Plus/Minus
Query 13683 CAACCTAGTTCTAATAGTAATCTATCAGCAATAAACTCAATATATTGAGACATTAAATCA 13742
||||||| ||||| || ||||| || |||| ||| ||||||||||| |||| | | |
Sbjct 890872 CAACCTAATTCTACAAGCAATCTGTCCGCAACAAATTCAATATATTGGCACATGAGTTTA 890813
Query 13743 CAATTCATACCTATTAGTTTTACAGGAATTATATTGGTTAAAAATTCTTTTTCTATAGAC 13802
|| ||||| ||||| | || || || | | ||||||||||||| ||| ||
Sbjct 890812 CAGTTCATGCCTATCATTTCAACGGGTAAAGCGTCAGTTAAAAATTCTTGTTCAATTTGG 890753
Query 13803 ACAGCCTCTTTTATAATAATTGTAATAATCTCATTAGAAGGAGGATATTTTAGATGTTTA 13862
|| || ||||| ||||| ||| | ||||| ||||| | | | | ||||||
Sbjct 890752 ACCGCGTCTTTAATAATTGATGTGACGCGTTCATTCGAAGGTTTCTGTATGATGTGTTTA 890693
Query 13863 AAAATTAAACACGCAAAATCACAATGAAGGCCCT 13896
|| ||||| || |||||||| ||||| | ||||
Sbjct 890692 AACATTAAGCATGCAAAATCGCAATGCAATCCCT 890659
Score = 91.5 bits (100), Expect = 1e-13
Identities = 82/103 (80%), Gaps = 0/103 (0%)
Strand=Plus/Minus
Query 13559 TTTGTTAGAAATAACGCCCATTTTTTGATATTCACTAACTCTTTTTTCAAAGAAGTTAGT 13618
|||||| | || || ||| |||||||||||| | |||| |||| || || ||||| ||
Sbjct 891068 TTTGTTTGCCATCACTCCCCATTTTTGATATTCTCCAACTTTTTTCTCGAAAAAGTTCGT 891009
Query 13619 TTTACCTTCCAGTGATATATTTTCCATAAAATCAAATGGATTT 13661
|||||||||| || |||| |||||| ||||| |||||||||
Sbjct 891008 CTTACCTTCCAAAGAAATATGTTCCATGAAATCGAATGGATTT 890966
Score = 84.2 bits (92), Expect = 2e-11
Identities = 97/128 (76%), Gaps = 2/128 (2%)
Strand=Plus/Minus
Query 14359 CCTTAGAAAGATCTACTTCATCAACTGTCCAAAAACTAGCGACAGCTTTTTTATACATTA 14418
|||||||||| |||||||| || ||||||||||| || | |||||||| ||||||
Sbjct 889930 CCTTAGAAAGGTCTACTTCCTCCACTGTCCAAAAGGAGGCTTCTGCTTTTTTGTACATTT 889871
Query 14419 CCCATATTTCTTTATATAATATAGGAAAAACTACAAATCT-CGAAGATGTTTCTTTAAGA 14477
||| || || || ||||||||||| |||||||| || ||| ||||||| ||
Sbjct 889870 GCCAAATGTCAGGCCATTGGATAGGAAAAACAACAAATCTACGTGGAT-TTTCTTTTAGC 889812
Query 14478 ATTGGTTC 14485
| ||||||
Sbjct 889811 AGTGGTTC 889804
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 479562697724400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |