Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Habropoda_20laboriosa_20[refseq_20GCF_5F001263275.1_202015-08-13] 27,566 sequences; 296,954,667 total letters Query= NC_004003.1 Length=149599 Score E Sequences producing significant alignments: (Bits) Value seq284 102 8e-17 >seq284 Length=1419496 Score = 102 bits (112), Expect = 8e-17 Identities = 133/183 (73%), Gaps = 1/183 (1%) Strand=Plus/Minus Query 13910 CCTTCTCTTTAGTACTTGAAATGTATGTATCAATAAGTAAGCTATACATTTCAGAGTGTA 13969 |||| ||||||| | || ||| |||||||| || | || |||||||| ||||| | Sbjct 890254 CCTT-TCTTTAGCATCTGCAATATATGTATCGATTAACAAAGAGTACATTTCTGAGTGCA 890196 Query 13970 TGTTTTCTATAGCTATCTGAAAACCATAAAAACATCTAGCTTCTGACCATTGTACCTCCG 14029 ||||| || || | ||||| |||||||| || | || |||| ||| |||||| Sbjct 890195 CATTTTCCATTGCAACTTGAAAGCCATAAAAGCAACGTGCCTCTGTTATTTGCACCTCCT 890136 Query 14030 AGTAAAATCTTTCTGCCAAGTTTTCATTAACAATACCATCACTAGCTGCAAAAAATGCCA 14089 | ||||| ||| | | |||||||| ||||| |||||| ||| ||||||||||| | Sbjct 890135 GGCTAAATCGTTCAACAAGATTTTCATTGACAATTCCATCAGAAGCAGCAAAAAATGCTA 890076 Query 14090 ATA 14092 ||| Sbjct 890075 ATA 890073 Score = 100 bits (110), Expect = 3e-16 Identities = 84/103 (82%), Gaps = 0/103 (0%) Strand=Plus/Minus Query 13347 TTTGTTAGAAATAACGCCCATTTTTTGATATTCACTAACTCTTTTTTCAAAAAAGTTAGT 13406 |||||| | || || ||| |||||||||||| | |||| |||| || |||||||| || Sbjct 891068 TTTGTTTGCCATCACTCCCCATTTTTGATATTCTCCAACTTTTTTCTCGAAAAAGTTCGT 891009 Query 13407 TTTACCTTCCAGTGATATATTTTCCATAAAATCGAATGGATTT 13449 |||||||||| || |||| |||||| ||||||||||||||| Sbjct 891008 CTTACCTTCCAAAGAAATATGTTCCATGAAATCGAATGGATTT 890966 Score = 91.5 bits (100), Expect = 1e-13 Identities = 157/226 (69%), Gaps = 4/226 (2%) Strand=Plus/Minus Query 13682 CCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGCATCAATCCTCGttttt 13741 ||||||||||| ||| ||||| || ||||| | |||||||| | ||||| || | Sbjct 890558 CCTCATCTCTAGAAATGAGTTCATTACTGAATGTAAGGCCTGGCATAAGTCCTCTCTTCT 890499 Query 13742 ttAACCAAAATATTGCAGCGAATGATCCGGAAAAGAATATTCCCTCAACTGCAGCAAACG 13801 |||||||||| || ||||| || || |||||| || || || ||||||||||| | Sbjct 890498 TTAACCAAAAAATGGCAGCAAAACTACCACTAAAGAAAATACCTTCCACTGCAGCAAATG 890439 Query 13802 CTATTAGTCGTTCTCCAAACGATGC--TTTTTTGTTTGATATCCATTTTCTAGCCCATTC 13859 | |||| ||||| ||| | || ||| || || |||||| ||| ||||| | Sbjct 890438 CAATTACACGTTCGGGAAAGGTAGCAGTTTCATGATT--TATCCAATTTAATGCCCAATT 890381 Query 13860 AGAtttttttttAATAAAATCCATTGTTTCGATTGCATTGAATAAA 13905 || |||| | || | | || |||| || ||||| |||||| Sbjct 890380 AGCTTTTCTCGCAACACACGGCAAATTTTCAATCGCATTAAATAAA 890335 Score = 87.8 bits (96), Expect = 2e-12 Identities = 150/215 (70%), Gaps = 2/215 (1%) Strand=Plus/Minus Query 13471 CAACCTAGTTCTAATAATAATCTATCAGCAATAAACTCAATATATTGAGACATTAAATCA 13530 ||||||| ||||| | ||||| || |||| ||| ||||||||||| |||| | | | Sbjct 890872 CAACCTAATTCTACAAGCAATCTGTCCGCAACAAATTCAATATATTGGCACATGAGTTTA 890813 Query 13531 CAATTCATACCTATTAGTTTTACAGGAATTATATTAGTTAAAAATTCTTTTTCTATAGAC 13590 || ||||| ||||| | || || || | | |||||||||||||| ||| || Sbjct 890812 CAGTTCATGCCTATCATTTCAACGGGTAAAGCGTCAGTTAAAAATTCTTGTTCAATTTGG 890753 Query 13591 ACAGCCTCGTTTATAA-TAATCTTAATAATGTCATTAGAAGGAGGATATTTTAGATGTTT 13649 || || || || |||| | || | | | ||||| ||||| | | | | ||||| Sbjct 890752 ACCGCGTCTTTAATAATTGATGTGACGCGT-TCATTCGAAGGTTTCTGTATGATGTGTTT 890694 Query 13650 AAAAATTAAACACGCAAAATCACAATGAAGGCCCT 13684 ||| ||||| || |||||||| ||||| | |||| Sbjct 890693 AAACATTAAGCATGCAAAATCGCAATGCAATCCCT 890659 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478423890264240