Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Habropoda_20laboriosa_20[refseq_20GCF_5F001263275.1_202015-08-13]
27,566 sequences; 296,954,667 total letters
Query= NC_004105.1
Length=209771
Score E
Sequences producing significant alignments: (Bits) Value
seq59 172 7e-38
seq284 107 3e-18
>seq59
Length=4191719
Score = 172 bits (190), Expect = 7e-38
Identities = 206/280 (74%), Gaps = 0/280 (0%)
Strand=Plus/Minus
Query 71049 CTGAATGGATCCACCATCTGCAATAATCCTATTTTTGATCTCTTCATTCCATAATTTTCT 71108
|||||| || || || ||| ||||| |||||| || || | || ||| | | |||
Sbjct 764808 CTGAATAGAACCGTTATTTGCTATAATTTCATTTTTCATGTCCTGATCCCAAAGATCTCT 764749
Query 71109 CTCGGTTAAAACTCTAAGGAGATGAGGATTAACTACTTGAAATTCTCCAGACAATACTCT 71168
|| || | | | | | | |||||||||||| |||||||| ||||||||||| |||||
Sbjct 764748 TTCAGTAAGATCCCGTAACAAATGAGGATTAACAACTTGAAACTCTCCAGACAAAACTCT 764689
Query 71169 ACGAGTGTAAATATTACTGGTATACGGTTCCACTGACTCATTATTTCCCAAAATTTGAGC 71228
| || ||||||||| | ||||| ||||| | |||||||||||||| |||||||| ||
Sbjct 764688 TCTTGTATAAATATTATTAGTATAGGGTTCTATGGACTCATTATTTCCTAAAATTTGCGC 764629
Query 71229 AGTTGATGCAGTCGGCATAGGTGCCACCAATAGACTATTTCTAAGACCATGTGATCGGAT 71288
||| ||||| || ||||||||||| | || | | |||||||| |||||| ||
Sbjct 764628 AGTAGATGCTGTTGGCATAGGTGCAATTAACAAAGAATTTCTAACTCCATGTTTAGCAAT 764569
Query 71289 TTTATCTTTTAGAGATTCCCAATTCCAAAGATCCGATGGT 71328
||| || |||| || |||||| ||| | ||| | ||||
Sbjct 764568 TTTTTCCTTTAAAGCAGCCCAATCCCATAAATCAGTTGGT 764529
Score = 104 bits (114), Expect = 3e-17
Identities = 199/290 (69%), Gaps = 20/290 (7%)
Strand=Plus/Minus
Query 71578 GCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTTC---TGACTATT 71634
|||||||||| ||||||||||| | ||| |||||||||| | ||| |||| |||
Sbjct 764153 GCTTCTGGAACTGGATAATAATTGACATCAATAATTTTATCCAAATTATAGGTGACAATT 764094
Query 71635 ACTTTGACCACATCCTTT---AGTTTGAGAAAATCAAATCTCCCATCTA-------TTAC 71684
|| ||| |||| ||||| ||||||||| | || || ||||
Sbjct 764093 ---TTCGTCAC---CTTTCGAAGTTTTTCAAAATCAAAAGTTTTAT-TAGCAGGATTTAC 764041
Query 71685 AAACACGTTCAAGGCAACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCGGCATA 71744
||||| |||| |||| || |||| ||| || || || | |||| | | || ||
Sbjct 764040 AAACATATTCACAGCAATTGAAGCCAAATTGCATACAGCAATTTCATCTGGACTGGAGTA 763981
Query 71745 TTGTATAATTTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACT 71804
|||| |||||| ||||| | ||| ||||||||||| ||||||| |||||| |||||
Sbjct 763980 CTGTACAATTTCTGTGCATAAATTGCTACACTTGATTGTTCCTATATTTTGATGATTTGA 763921
Query 71805 CTTTTTGTTACACGCATCCTTATAAAGAATAAACGGAGTACCAGTTTCAA 71854
|| || || ||| |||||||| || | ||||| || |||||||
Sbjct 763920 TTTACGATTGCAGTGATCTTTATAAAGCATGTAAGGAGTTCCTGTTTCAA 763871
Score = 91.5 bits (100), Expect = 2e-13
Identities = 118/159 (74%), Gaps = 3/159 (2%)
Strand=Plus/Minus
Query 71943 TTCGAACTCGTCTCCCCAAGCATTGTCTAATCCAGGACATTCATTCGGACACATCAATGA 72002
||| || || || |||||| ||| ||||| |||||| |||| | || ||||| || |
Sbjct 763504 TTCAAATTCATCACCCCAAACATCATCTAAACCAGGAGATTCGTGTGGGCACATTAAAGT 763445
Query 72003 CCACTCTCCATCATCATTTACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATA-A 72061
||| |||| || |||||||||||||| |||||||||||||| | ||| ||| |
Sbjct 763444 CCAAATACCATTTTCCAAAACTCGTTTCATAAAAAGATCAGGAATCCATAAAGC-ATAGA 763386
Query 72062 ATAGATCTCTGGTTCTATGCTCCTCGTTTCCTG-TATTC 72099
||| ||||| | ||||| || || || |||| |||||
Sbjct 763385 ATAATTCTCTTGCTCTATTTTCTTCTTTACCTGTTATTC 763347
Score = 87.8 bits (96), Expect = 2e-12
Identities = 176/259 (68%), Gaps = 4/259 (2%)
Strand=Plus/Minus
Query 72397 CTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAAC 72456
||||||||||| || | |||| | ||| ||| | || || ||||| || |||||
Sbjct 762895 CTAGACATTTGCTGTTGCTTAGTACATGCAGCAAAAAGAGTTGGTGAAGCATGTGTAAAA 762836
Query 72457 CATTTTTCAGACAGTAGATTGTACGTCTCAATAGCTGATTCTATATCCCATTGATGTATT 72516
| ||| || | | ||| || || || |||||| || ||||| ||| ||
Sbjct 762835 TAACGTTCTGATAAGAAATTATATGTTTCTATAGCTCTGTCAATATCATCACCATGGATA 762776
Query 72517 CCTACCGCGACACGCATTAACATATGCTGAGGTCTTTCAACGATCTTGTTATTTATTTTC 72576
| || || || | ||||||||| ||||| || || ||||| | || || ||| ||
Sbjct 762775 GCAACTGCAACTCTCATTAACATGTGCTGTGGCCTCTCAACAACTTTTCCATATATCTTT 762716
Query 72577 AACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA--TGAAAAGTCTCGTT 72634
|| || ||| | |||| | ||||| ||||||||||| ||||| ||||| |||| |
Sbjct 762715 AATAAATAGCTTCTTTCAAGTGTTTTGAAACCAAAATAATTGTAACTGAAA--TCTCTAT 762658
Query 72635 CGTAAATAATAACCGAATT 72653
| ||||| || | |||||
Sbjct 762657 CATAAATTATTGCAGAATT 762639
>seq284
Length=1419496
Score = 107 bits (118), Expect = 3e-18
Identities = 145/202 (72%), Gaps = 0/202 (0%)
Strand=Plus/Minus
Query 42315 TTTCATTACTATCTTTAACATATGTATCGATCAAAAGACTATACATTTCTGAATGAATGT 42374
|||| ||| |||| || |||||||||||| || | | ||||||||||| || | |
Sbjct 890252 TTTCTTTAGCATCTGCAATATATGTATCGATTAACAAAGAGTACATTTCTGAGTGCACAT 890193
Query 42375 TTTCAATGGCCATCTGAAATCCGTAGAAACATCTGGCCTCGGTAACCTGTACTTCTGTAC 42434
|||| || || | ||||| || || || || | ||||| || | || || || |
Sbjct 890192 TTTCCATTGCAACTTGAAAGCCATAAAAGCAACGTGCCTCTGTTATTTGCACCTCCTGGC 890133
Query 42435 AAAATCGTTCAGCTAAATTTTCGTTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATA 42494
|||||||||| | | |||||| || || ||||| ||| || |||||||| || ||||
Sbjct 890132 TAAATCGTTCAACAAGATTTTCATTGACAATTCCATCAGAAGCAGCAAAAAATGCTAATA 890073
Query 42495 CATGTTTTATAAAATATTTTTC 42516
||||| |||||| | ||| ||
Sbjct 890072 CATGTGATATAAATTTTTTCTC 890051
Score = 100 bits (110), Expect = 4e-16
Identities = 162/232 (70%), Gaps = 6/232 (3%)
Strand=Plus/Minus
Query 41861 TTATAAAtttttttAAATCCCAATTCAGAAATCAATCTATCTGCGATGAATTCTATATAT 41920
||| ||| |||| | || ||||| || |||||| || || | ||||| ||||||
Sbjct 890887 TTACAAACCTTTTGGCAACCTAATTCTACAAGCAATCTGTCCGCAACAAATTCAATATAT 890828
Query 41921 GTTTTCATCATTTCACAATTCATTCCTATAAGTTTAACTGGAAGAGCCACAGTAAGAAAT 41980
||| | || ||| ||||| ||||| | || ||| || | ||| |||| | ||||
Sbjct 890827 TGGCACATGAGTTTACAGTTCATGCCTATCATTTCAACGGGTAAAGCGTCAGTTAAAAAT 890768
Query 41981 TCTTGTTCAATAGAGACCGCGTCTGTTATAATAGATCTTACTGTTTCTTCACTCGGTGGA 42040
||||||||||| |||||||||| | ||||| ||| | || |||| ||| ||
Sbjct 890767 TCTTGTTCAATTTGGACCGCGTCTTTAATAATTGATGTGAC---GCGTTCATTCGAAGGT 890711
Query 42041 TAC---AATAAATGTTTAAACATCAAACATGCGAAATCGCAGTGCAGACCCT 42089
| | | | ||||||||||| || ||||| |||||||| |||| ||||
Sbjct 890710 TTCTGTATGATGTGTTTAAACATTAAGCATGCAAAATCGCAATGCAATCCCT 890659
Score = 89.7 bits (98), Expect = 7e-13
Identities = 104/138 (75%), Gaps = 3/138 (2%)
Strand=Plus/Minus
Query 41719 TTAAAAGTCAACATCTAAAGAAAAATGATTGTCT-TCTTGA--GACATAACTCCCATTTT 41775
|||||||||| ||| | | ||||| | ||| | ||| | ||| |||||| |||
Sbjct 891104 TTAAAAGTCAGCATTAACTGTAAAATTGCTCTCTATTTTGTTTGCCATCACTCCCCATTT 891045
Query 41776 TTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTCTTTCCTTCCAATGATATATTTTC 41835
||| ||||| || || ||| |||||||| || ||||| |||||||| || |||| |||
Sbjct 891044 TTGATATTCTCCAACTTTTTTCTCGAAAAAGTTCGTCTTACCTTCCAAAGAAATATGTTC 890985
Query 41836 CATGAAATCAAACGGATT 41853
||||||||| || |||||
Sbjct 890984 CATGAAATCGAATGGATT 890967
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 670907942210160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |