Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Habropoda_20laboriosa_20[refseq_20GCF_5F001263275.1_202015-08-13] 27,566 sequences; 296,954,667 total letters Query= NC_004778.3 Length=129593 Score E Sequences producing significant alignments: (Bits) Value seq65 86.0 5e-12 >seq65 Length=771584 Score = 86.0 bits (94), Expect = 5e-12 Identities = 157/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 18813 TTCCTCCTCGCAACCTTAACACCATGTGCAACGTAGACTCCTTTTGAATATTGTAATCCG 18872 |||||||||| | | ||||||| ||||| || ||||||||||| ||||||||||| | Sbjct 537126 TTCCTCCTCGGAGTCGCAACACCAAGTGCAGGGTGGACTCCTTTTGGATATTGTAATCTG 537067 Query 18873 CCATTGTTTTGGCGTCCTCCAGCTGTTTACCCGCATAAATAAGTCTCTGCTGATCCACGG 18932 | ||| | || |||| ||||||||| ||| | || | | |||||| || | Sbjct 537066 AAAGTGTGCGCCCATCTTCCAACTGTTTACCAGCAAAGATCAAACGCTGCTGGTCGGGAG 537007 Query 18933 GCACGCCCTCTTTGTCGGCAATTTTCTGTTTTACCTGGCCGACAGTATCGCCAGGCTCCG 18992 | | || |||||||| ||| || || || | | | || || || ||| Sbjct 537006 GGATTCCTTCTTTGTCTTGAATCTTGGCCTTAACGTTCTCTATTGTGTCTGAAGCCTCAA 536947 Query 18993 TTTCGACGGTAATGGTTTTACCTGTTAAAGTTTTGACAAAAATTTGCATT 19042 ||||| || |||||||| ||||| | || ||||| || || |||||| Sbjct 536946 CTTCGAGTGTGATGGTTTTCCCTGTGAGCGTCTTGACGAAGATCTGCATT 536897 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 414433519863004