Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Habropoda_20laboriosa_20[refseq_20GCF_5F001263275.1_202015-08-13]
27,566 sequences; 296,954,667 total letters
Query= NC_005038.1
Length=99657
Score E
Sequences producing significant alignments: (Bits) Value
seq65 111 1e-19
seq49 82.4 5e-11
>seq65
Length=771584
Score = 111 bits (122), Expect = 1e-19
Identities = 156/218 (72%), Gaps = 6/218 (3%)
Strand=Plus/Minus
Query 33155 CGCAACACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGACAAATTGAGTTGG 33214
||||||||||| |||| ||| ||||||||||| ||||||||||| || | || |
Sbjct 537340 CGCAACACCAAGTGCAGTGTGGACTCTTTTTGGATATTGTAATCTGAAAGGGTGCGCCCA 537281
Query 33215 TCATCCAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGGTATGCCTTCTTTT 33274
|| |||||||| || ||| ||| || ||||| |||||||| | || || ||||||||
Sbjct 537280 TCTTCCAATTGTTTGCCAGCAAAGATCAAACGCTGCTGGTCGGGAGGGATACCTTCTTTG 537221
Query 33275 TCGCTAATC---GCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTGAACGTCCAGAGTT 33331
|| |||| ||| || || ||| || ||||| | | ||| || || ||
Sbjct 537220 TCTTGAATCTTGGCC---TTAACGTTTTCTATTGTGTCTGAAGCCTCAACTTCGAGTGTG 537164
Query 33332 ATCGTTTTTCCCGTAAGAGTTTTTACGAAAATTTGCAT 33369
|| ||||| ||||| || || || ||||| || |||||
Sbjct 537163 ATGGTTTTCCCCGTCAGCGTCTTAACGAAGATCTGCAT 537126
Score = 105 bits (116), Expect = 4e-18
Identities = 155/218 (71%), Gaps = 6/218 (3%)
Strand=Plus/Minus
Query 33155 CGCAACACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGACAAATTGAGTTGG 33214
||||| ||||| |||||||| ||||||||||| ||||||||||| || | | || |
Sbjct 536656 CGCAATACCAAGTGCAATGTGGACTCTTTTTGGATATTGTAATCTGAAAGAGTGCGCCCA 536597
Query 33215 TCATCCAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGGTATGCCTTCTTTT 33274
|| ||||| || || ||| ||| || ||||| |||||||| | || || ||||||||
Sbjct 536596 TCTTCCAACTGTTTACCAGCAAAGATCAAACGCTGCTGGTCGGGAGGGATTCCTTCTTTG 536537
Query 33275 TCGCTAATC---GCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTGAACGTCCAGAGTT 33331
|| |||| ||| || || ||| || ||||| | | ||| || || ||
Sbjct 536536 TCTTGAATCTTGGCC---TTAACGTTTTCTATTGTGTCTGAAGCCTCAACTTCGAGTGTG 536480
Query 33332 ATCGTTTTTCCCGTAAGAGTTTTTACGAAAATTTGCAT 33369
|| ||||| || || || || || ||||| || |||||
Sbjct 536479 ATGGTTTTCCCTGTGAGCGTCTTGACGAAGATCTGCAT 536442
Score = 105 bits (116), Expect = 4e-18
Identities = 155/218 (71%), Gaps = 6/218 (3%)
Strand=Plus/Minus
Query 33155 CGCAACACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGACAAATTGAGTTGG 33214
||||||||||| |||| ||| ||||||||||| ||||||||||| || | || |
Sbjct 536884 CGCAACACCAAGTGCAGTGTGGACTCTTTTTGGATATTGTAATCTGAAAGTGTGCGCCCA 536825
Query 33215 TCATCCAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGGTATGCCTTCTTTT 33274
|| |||||||| || ||| ||| || ||||| |||||||| | || || ||||||||
Sbjct 536824 TCTTCCAATTGTTTGCCAGCAAAGATCAAACGCTGCTGGTCGGGAGGGATTCCTTCTTTG 536765
Query 33275 TCGCTAATC---GCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTGAACGTCCAGAGTT 33331
|| |||| ||| || || ||| || ||||| | | ||| || || ||
Sbjct 536764 TCTTGAATCTTGGCC---TTAACGTTTTCTATTGTGTCTGAAGCCTCAACTTCGAGTGTG 536708
Query 33332 ATCGTTTTTCCCGTAAGAGTTTTTACGAAAATTTGCAT 33369
|| ||||| || || || || || ||||| || |||||
Sbjct 536707 ATGGTTTTCCCTGTGAGCGTCTTGACGAAGATCTGCAT 536670
Score = 105 bits (116), Expect = 4e-18
Identities = 155/218 (71%), Gaps = 6/218 (3%)
Strand=Plus/Minus
Query 33155 CGCAACACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGACAAATTGAGTTGG 33214
||||||||||| |||| ||| ||||||||||| || |||||||| || | | || |
Sbjct 538480 CGCAACACCAAGTGCAGTGTGGACTCTTTTTGGATGTTGTAATCTGAAAGAGTGCGCCCA 538421
Query 33215 TCATCCAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGGTATGCCTTCTTTT 33274
|| ||||| || || ||| |||||| ||||| |||||||| | || || || |||||
Sbjct 538420 TCTTCCAACTGTTTGCCAGCAAATATCAAACGCTGCTGGTCGGGAGGGATTCCCTCTTTG 538361
Query 33275 TCGCTAATC---GCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTGAACGTCCAGAGTT 33331
|| |||| ||| || || | | || ||||| | | ||| ||||| ||
Sbjct 538360 TCTTGAATCTTAGCC---TTAACGTTATCTATTGTGTCTGAAGCCTCAACTTCCAGGGTG 538304
Query 33332 ATCGTTTTTCCCGTAAGAGTTTTTACGAAAATTTGCAT 33369
|| ||||| ||||| || ||||| || || || |||||
Sbjct 538303 ATGGTTTTCCCCGTGAGTGTTTTGACAAAGATCTGCAT 538266
Score = 104 bits (114), Expect = 1e-17
Identities = 157/222 (71%), Gaps = 6/222 (3%)
Strand=Plus/Minus
Query 33155 CGCAACACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGACAAATTGAGTTGG 33214
||||| ||||| |||| ||| ||||||||||| ||||||||||| || | | || |
Sbjct 536428 CGCAATACCAAGTGCAGTGTGGACTCTTTTTGGATATTGTAATCTGAAAGAGTGCGACCA 536369
Query 33215 TCATCCAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGGTATGCCTTCTTT- 33273
|| ||||| || || ||| ||| || ||||| |||||||| | || || ||||||||
Sbjct 536368 TCTTCCAACTGTTTCCCAGCAAAGATCAAACGCTGCTGGTCGGGAGGGATTCCTTCTTTG 536309
Query 33274 --TTCGCTAATCGCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTGAACGTCCAGAGTT 33331
|| | | | ||| || || | | || ||||| || || || |||| ||
Sbjct 536308 TCTTGGATCTTGGCC---TTCACATTCTCTATTGTGTCTGAGGCTTCTACCTCCAAGGTG 536252
Query 33332 ATCGTTTTTCCCGTAAGAGTTTTTACGAAAATTTGCATGTTT 33373
|| ||||| || || || ||||| ||||| || ||||| |||
Sbjct 536251 ATGGTTTTACCTGTGAGGGTTTTGACGAAGATCTGCATATTT 536210
Score = 102 bits (112), Expect = 5e-17
Identities = 154/218 (71%), Gaps = 6/218 (3%)
Strand=Plus/Minus
Query 33155 CGCAACACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGACAAATTGAGTTGG 33214
||||||||||| |||| ||| ||||||||||| || |||||||| || | | || |
Sbjct 537568 CGCAACACCAAGTGCAGTGTGGACTCTTTTTGGATGTTGTAATCTGAAAGAGTGCGCCCA 537509
Query 33215 TCATCCAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGGTATGCCTTCTTTT 33274
|| ||||| || || ||| ||| |||||||| |||||||| | || || ||||||||
Sbjct 537508 TCTTCCAACTGTTTGCCAGCAAAGATTAAACGCTGCTGGTCGGGAGGGATTCCTTCTTTG 537449
Query 33275 TCGCTAATC---GCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTGAACGTCCAGAGTT 33331
|| |||| ||| || || | | || ||||| || || || |||| ||
Sbjct 537448 TCTTGAATCTTGGCC---TTAACGTTCTCTATTGTGTCTGAGGCTTCTACCTCCAAGGTG 537392
Query 33332 ATCGTTTTTCCCGTAAGAGTTTTTACGAAAATTTGCAT 33369
|| ||||| || || || || || || || || |||||
Sbjct 537391 ATGGTTTTCCCTGTGAGCGTCTTGACAAAGATCTGCAT 537354
Score = 102 bits (112), Expect = 5e-17
Identities = 154/218 (71%), Gaps = 6/218 (3%)
Strand=Plus/Minus
Query 33155 CGCAACACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGACAAATTGAGTTGG 33214
||||||||||| |||| ||| ||||| ||||| || |||||||| || | | || ||
Sbjct 538708 CGCAACACCAAGTGCAGTGTGGACTCCTTTTGGATGTTGTAATCTGAAAGAGTGCGTCCA 538649
Query 33215 TCATCCAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGGTATGCCTTCTTT- 33273
|| ||||| ||||| ||| ||| || | ||| |||||||| | || || ||||||||
Sbjct 538648 TCTTCCAACTGCTTCCCAGCAAAGATCAGACGCTGCTGGTCAGAAGGGATTCCTTCTTTG 538589
Query 33274 --TTCGCTAATCGCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTGAACGTCCAGAGTT 33331
| || | | || ||| || | | || ||||| | | ||| ||||| ||
Sbjct 538588 TCTACGATTTTGGC---TTTAACGTTCTCTATTGTGTCTGAAGCCTCAACTTCCAGGGTG 538532
Query 33332 ATCGTTTTTCCCGTAAGAGTTTTTACGAAAATTTGCAT 33369
|| ||||| ||||| || || || ||||| || |||||
Sbjct 538531 ATGGTTTTCCCCGTGAGCGTCTTGACGAAGATCTGCAT 538494
Score = 100 bits (110), Expect = 2e-16
Identities = 151/215 (70%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 33155 CGCAACACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGACAAATTGAGTTGG 33214
||||||||||| |||| |||||||||||| || || |||||||| || | | || |
Sbjct 538936 CGCAACACCAAGTGCAGTGTCGACTCTTTCTGGATGTTGTAATCTGAAAGAGTGCGACCA 538877
Query 33215 TCATCCAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGGTATGCCTTCTTTT 33274
|| |||| || || ||| ||| || ||||| |||||||| | || || ||||||||
Sbjct 538876 TCTTCCAGCTGTTTACCAGCAAAGATCAAACGCTGCTGGTCAGGAGGGATTCCTTCTTTG 538817
Query 33275 TCGCTAATCGCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTGAACGTCCAGAGTTATC 33334
|| |||| ||| || | | || ||||| | | ||| ||||| || ||
Sbjct 538816 TCTTGAATCTTGGCTTTAACGTTCTCTATTGTGTCTGAAGCCTCAACTTCCAGGGTGATG 538757
Query 33335 GTTTTTCCCGTAAGAGTTTTTACGAAAATTTGCAT 33369
||||| ||||| || || || || || || |||||
Sbjct 538756 GTTTTCCCCGTCAGCGTCTTGACAAAGATCTGCAT 538722
Score = 87.8 bits (96), Expect = 1e-12
Identities = 151/218 (69%), Gaps = 6/218 (3%)
Strand=Plus/Minus
Query 33155 CGCAACACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGACAAATTGAGTTGG 33214
||||||||||| |||| || ||||| ||||| ||||||||||| || | || |
Sbjct 537112 CGCAACACCAAGTGCAGGGTGGACTCCTTTTGGATATTGTAATCTGAAAGTGTGCGCCCA 537053
Query 33215 TCATCCAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGGTATGCCTTCTTTT 33274
|| ||||| || || ||| ||| || ||||| |||||||| | || || ||||||||
Sbjct 537052 TCTTCCAACTGTTTACCAGCAAAGATCAAACGCTGCTGGTCGGGAGGGATTCCTTCTTTG 536993
Query 33275 TCGCTAATC---GCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTGAACGTCCAGAGTT 33331
|| |||| ||| || || | | || ||||| | | ||| || || ||
Sbjct 536992 TCTTGAATCTTGGCC---TTAACGTTCTCTATTGTGTCTGAAGCCTCAACTTCGAGTGTG 536936
Query 33332 ATCGTTTTTCCCGTAAGAGTTTTTACGAAAATTTGCAT 33369
|| ||||| || || || || || ||||| || |||||
Sbjct 536935 ATGGTTTTCCCTGTGAGCGTCTTGACGAAGATCTGCAT 536898
>seq49
Length=1886280
Score = 82.4 bits (90), Expect = 5e-11
Identities = 139/200 (70%), Gaps = 6/200 (3%)
Strand=Plus/Plus
Query 33173 GTCGACTCTTTTTGTATATTGTAATCAGACAAATTGAGTTGGTCATCCAATTGCTTTCCA 33232
|| ||||| ||||| ||||| || ||||| | || || || || | |||||| |||
Sbjct 1161131 GTTGACTCCTTTTGAATATTATAGTCAGAAAGTGTGCGTCCATCTTCAAGTTGCTTACCA 1161190
Query 33233 CTAAATATTAAACGTTGCTGGTCCGTGGGTATGCCTTCTTTTTCGCTAATC---GCCTGT 33289
|| || || | |||||| || | ||| ||||| || || || ||| ||||
Sbjct 1161191 GCGAAAATCAATCTTTGCTGATCTGGGGGAATGCCCTCCTTGTCCTGAATTTTTGCCT-- 1161248
Query 33290 TTTACTGTTTGAATCGTGTCGTTGGGTTGAACGTCCAGAGTTATCGTTTTTCCCGTAAGA 33349
| || | | |||||| || | || ||| || | ||| || |||||||| |||||
Sbjct 1161249 -TCACATTCTCAATCGTATCAGAAGCTTCAACTTCTAAAGTAATAGTTTTTCCAGTAAGG 1161307
Query 33350 GTTTTTACGAAAATTTGCAT 33369
||||| ||||||||||||||
Sbjct 1161308 GTTTTGACGAAAATTTGCAT 1161327
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 318670503278268
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |