Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Habropoda_20laboriosa_20[refseq_20GCF_5F001263275.1_202015-08-13] 27,566 sequences; 296,954,667 total letters Query= NC_005038.1 Length=99657 Score E Sequences producing significant alignments: (Bits) Value seq65 111 1e-19 seq49 82.4 5e-11 >seq65 Length=771584 Score = 111 bits (122), Expect = 1e-19 Identities = 156/218 (72%), Gaps = 6/218 (3%) Strand=Plus/Minus Query 33155 CGCAACACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGACAAATTGAGTTGG 33214 ||||||||||| |||| ||| ||||||||||| ||||||||||| || | || | Sbjct 537340 CGCAACACCAAGTGCAGTGTGGACTCTTTTTGGATATTGTAATCTGAAAGGGTGCGCCCA 537281 Query 33215 TCATCCAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGGTATGCCTTCTTTT 33274 || |||||||| || ||| ||| || ||||| |||||||| | || || |||||||| Sbjct 537280 TCTTCCAATTGTTTGCCAGCAAAGATCAAACGCTGCTGGTCGGGAGGGATACCTTCTTTG 537221 Query 33275 TCGCTAATC---GCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTGAACGTCCAGAGTT 33331 || |||| ||| || || ||| || ||||| | | ||| || || || Sbjct 537220 TCTTGAATCTTGGCC---TTAACGTTTTCTATTGTGTCTGAAGCCTCAACTTCGAGTGTG 537164 Query 33332 ATCGTTTTTCCCGTAAGAGTTTTTACGAAAATTTGCAT 33369 || ||||| ||||| || || || ||||| || ||||| Sbjct 537163 ATGGTTTTCCCCGTCAGCGTCTTAACGAAGATCTGCAT 537126 Score = 105 bits (116), Expect = 4e-18 Identities = 155/218 (71%), Gaps = 6/218 (3%) Strand=Plus/Minus Query 33155 CGCAACACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGACAAATTGAGTTGG 33214 ||||| ||||| |||||||| ||||||||||| ||||||||||| || | | || | Sbjct 536656 CGCAATACCAAGTGCAATGTGGACTCTTTTTGGATATTGTAATCTGAAAGAGTGCGCCCA 536597 Query 33215 TCATCCAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGGTATGCCTTCTTTT 33274 || ||||| || || ||| ||| || ||||| |||||||| | || || |||||||| Sbjct 536596 TCTTCCAACTGTTTACCAGCAAAGATCAAACGCTGCTGGTCGGGAGGGATTCCTTCTTTG 536537 Query 33275 TCGCTAATC---GCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTGAACGTCCAGAGTT 33331 || |||| ||| || || ||| || ||||| | | ||| || || || Sbjct 536536 TCTTGAATCTTGGCC---TTAACGTTTTCTATTGTGTCTGAAGCCTCAACTTCGAGTGTG 536480 Query 33332 ATCGTTTTTCCCGTAAGAGTTTTTACGAAAATTTGCAT 33369 || ||||| || || || || || ||||| || ||||| Sbjct 536479 ATGGTTTTCCCTGTGAGCGTCTTGACGAAGATCTGCAT 536442 Score = 105 bits (116), Expect = 4e-18 Identities = 155/218 (71%), Gaps = 6/218 (3%) Strand=Plus/Minus Query 33155 CGCAACACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGACAAATTGAGTTGG 33214 ||||||||||| |||| ||| ||||||||||| ||||||||||| || | || | Sbjct 536884 CGCAACACCAAGTGCAGTGTGGACTCTTTTTGGATATTGTAATCTGAAAGTGTGCGCCCA 536825 Query 33215 TCATCCAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGGTATGCCTTCTTTT 33274 || |||||||| || ||| ||| || ||||| |||||||| | || || |||||||| Sbjct 536824 TCTTCCAATTGTTTGCCAGCAAAGATCAAACGCTGCTGGTCGGGAGGGATTCCTTCTTTG 536765 Query 33275 TCGCTAATC---GCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTGAACGTCCAGAGTT 33331 || |||| ||| || || ||| || ||||| | | ||| || || || Sbjct 536764 TCTTGAATCTTGGCC---TTAACGTTTTCTATTGTGTCTGAAGCCTCAACTTCGAGTGTG 536708 Query 33332 ATCGTTTTTCCCGTAAGAGTTTTTACGAAAATTTGCAT 33369 || ||||| || || || || || ||||| || ||||| Sbjct 536707 ATGGTTTTCCCTGTGAGCGTCTTGACGAAGATCTGCAT 536670 Score = 105 bits (116), Expect = 4e-18 Identities = 155/218 (71%), Gaps = 6/218 (3%) Strand=Plus/Minus Query 33155 CGCAACACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGACAAATTGAGTTGG 33214 ||||||||||| |||| ||| ||||||||||| || |||||||| || | | || | Sbjct 538480 CGCAACACCAAGTGCAGTGTGGACTCTTTTTGGATGTTGTAATCTGAAAGAGTGCGCCCA 538421 Query 33215 TCATCCAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGGTATGCCTTCTTTT 33274 || ||||| || || ||| |||||| ||||| |||||||| | || || || ||||| Sbjct 538420 TCTTCCAACTGTTTGCCAGCAAATATCAAACGCTGCTGGTCGGGAGGGATTCCCTCTTTG 538361 Query 33275 TCGCTAATC---GCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTGAACGTCCAGAGTT 33331 || |||| ||| || || | | || ||||| | | ||| ||||| || Sbjct 538360 TCTTGAATCTTAGCC---TTAACGTTATCTATTGTGTCTGAAGCCTCAACTTCCAGGGTG 538304 Query 33332 ATCGTTTTTCCCGTAAGAGTTTTTACGAAAATTTGCAT 33369 || ||||| ||||| || ||||| || || || ||||| Sbjct 538303 ATGGTTTTCCCCGTGAGTGTTTTGACAAAGATCTGCAT 538266 Score = 104 bits (114), Expect = 1e-17 Identities = 157/222 (71%), Gaps = 6/222 (3%) Strand=Plus/Minus Query 33155 CGCAACACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGACAAATTGAGTTGG 33214 ||||| ||||| |||| ||| ||||||||||| ||||||||||| || | | || | Sbjct 536428 CGCAATACCAAGTGCAGTGTGGACTCTTTTTGGATATTGTAATCTGAAAGAGTGCGACCA 536369 Query 33215 TCATCCAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGGTATGCCTTCTTT- 33273 || ||||| || || ||| ||| || ||||| |||||||| | || || |||||||| Sbjct 536368 TCTTCCAACTGTTTCCCAGCAAAGATCAAACGCTGCTGGTCGGGAGGGATTCCTTCTTTG 536309 Query 33274 --TTCGCTAATCGCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTGAACGTCCAGAGTT 33331 || | | | ||| || || | | || ||||| || || || |||| || Sbjct 536308 TCTTGGATCTTGGCC---TTCACATTCTCTATTGTGTCTGAGGCTTCTACCTCCAAGGTG 536252 Query 33332 ATCGTTTTTCCCGTAAGAGTTTTTACGAAAATTTGCATGTTT 33373 || ||||| || || || ||||| ||||| || ||||| ||| Sbjct 536251 ATGGTTTTACCTGTGAGGGTTTTGACGAAGATCTGCATATTT 536210 Score = 102 bits (112), Expect = 5e-17 Identities = 154/218 (71%), Gaps = 6/218 (3%) Strand=Plus/Minus Query 33155 CGCAACACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGACAAATTGAGTTGG 33214 ||||||||||| |||| ||| ||||||||||| || |||||||| || | | || | Sbjct 537568 CGCAACACCAAGTGCAGTGTGGACTCTTTTTGGATGTTGTAATCTGAAAGAGTGCGCCCA 537509 Query 33215 TCATCCAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGGTATGCCTTCTTTT 33274 || ||||| || || ||| ||| |||||||| |||||||| | || || |||||||| Sbjct 537508 TCTTCCAACTGTTTGCCAGCAAAGATTAAACGCTGCTGGTCGGGAGGGATTCCTTCTTTG 537449 Query 33275 TCGCTAATC---GCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTGAACGTCCAGAGTT 33331 || |||| ||| || || | | || ||||| || || || |||| || Sbjct 537448 TCTTGAATCTTGGCC---TTAACGTTCTCTATTGTGTCTGAGGCTTCTACCTCCAAGGTG 537392 Query 33332 ATCGTTTTTCCCGTAAGAGTTTTTACGAAAATTTGCAT 33369 || ||||| || || || || || || || || ||||| Sbjct 537391 ATGGTTTTCCCTGTGAGCGTCTTGACAAAGATCTGCAT 537354 Score = 102 bits (112), Expect = 5e-17 Identities = 154/218 (71%), Gaps = 6/218 (3%) Strand=Plus/Minus Query 33155 CGCAACACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGACAAATTGAGTTGG 33214 ||||||||||| |||| ||| ||||| ||||| || |||||||| || | | || || Sbjct 538708 CGCAACACCAAGTGCAGTGTGGACTCCTTTTGGATGTTGTAATCTGAAAGAGTGCGTCCA 538649 Query 33215 TCATCCAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGGTATGCCTTCTTT- 33273 || ||||| ||||| ||| ||| || | ||| |||||||| | || || |||||||| Sbjct 538648 TCTTCCAACTGCTTCCCAGCAAAGATCAGACGCTGCTGGTCAGAAGGGATTCCTTCTTTG 538589 Query 33274 --TTCGCTAATCGCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTGAACGTCCAGAGTT 33331 | || | | || ||| || | | || ||||| | | ||| ||||| || Sbjct 538588 TCTACGATTTTGGC---TTTAACGTTCTCTATTGTGTCTGAAGCCTCAACTTCCAGGGTG 538532 Query 33332 ATCGTTTTTCCCGTAAGAGTTTTTACGAAAATTTGCAT 33369 || ||||| ||||| || || || ||||| || ||||| Sbjct 538531 ATGGTTTTCCCCGTGAGCGTCTTGACGAAGATCTGCAT 538494 Score = 100 bits (110), Expect = 2e-16 Identities = 151/215 (70%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 33155 CGCAACACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGACAAATTGAGTTGG 33214 ||||||||||| |||| |||||||||||| || || |||||||| || | | || | Sbjct 538936 CGCAACACCAAGTGCAGTGTCGACTCTTTCTGGATGTTGTAATCTGAAAGAGTGCGACCA 538877 Query 33215 TCATCCAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGGTATGCCTTCTTTT 33274 || |||| || || ||| ||| || ||||| |||||||| | || || |||||||| Sbjct 538876 TCTTCCAGCTGTTTACCAGCAAAGATCAAACGCTGCTGGTCAGGAGGGATTCCTTCTTTG 538817 Query 33275 TCGCTAATCGCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTGAACGTCCAGAGTTATC 33334 || |||| ||| || | | || ||||| | | ||| ||||| || || Sbjct 538816 TCTTGAATCTTGGCTTTAACGTTCTCTATTGTGTCTGAAGCCTCAACTTCCAGGGTGATG 538757 Query 33335 GTTTTTCCCGTAAGAGTTTTTACGAAAATTTGCAT 33369 ||||| ||||| || || || || || || ||||| Sbjct 538756 GTTTTCCCCGTCAGCGTCTTGACAAAGATCTGCAT 538722 Score = 87.8 bits (96), Expect = 1e-12 Identities = 151/218 (69%), Gaps = 6/218 (3%) Strand=Plus/Minus Query 33155 CGCAACACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGACAAATTGAGTTGG 33214 ||||||||||| |||| || ||||| ||||| ||||||||||| || | || | Sbjct 537112 CGCAACACCAAGTGCAGGGTGGACTCCTTTTGGATATTGTAATCTGAAAGTGTGCGCCCA 537053 Query 33215 TCATCCAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGGTATGCCTTCTTTT 33274 || ||||| || || ||| ||| || ||||| |||||||| | || || |||||||| Sbjct 537052 TCTTCCAACTGTTTACCAGCAAAGATCAAACGCTGCTGGTCGGGAGGGATTCCTTCTTTG 536993 Query 33275 TCGCTAATC---GCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTGAACGTCCAGAGTT 33331 || |||| ||| || || | | || ||||| | | ||| || || || Sbjct 536992 TCTTGAATCTTGGCC---TTAACGTTCTCTATTGTGTCTGAAGCCTCAACTTCGAGTGTG 536936 Query 33332 ATCGTTTTTCCCGTAAGAGTTTTTACGAAAATTTGCAT 33369 || ||||| || || || || || ||||| || ||||| Sbjct 536935 ATGGTTTTCCCTGTGAGCGTCTTGACGAAGATCTGCAT 536898 >seq49 Length=1886280 Score = 82.4 bits (90), Expect = 5e-11 Identities = 139/200 (70%), Gaps = 6/200 (3%) Strand=Plus/Plus Query 33173 GTCGACTCTTTTTGTATATTGTAATCAGACAAATTGAGTTGGTCATCCAATTGCTTTCCA 33232 || ||||| ||||| ||||| || ||||| | || || || || | |||||| ||| Sbjct 1161131 GTTGACTCCTTTTGAATATTATAGTCAGAAAGTGTGCGTCCATCTTCAAGTTGCTTACCA 1161190 Query 33233 CTAAATATTAAACGTTGCTGGTCCGTGGGTATGCCTTCTTTTTCGCTAATC---GCCTGT 33289 || || || | |||||| || | ||| ||||| || || || ||| |||| Sbjct 1161191 GCGAAAATCAATCTTTGCTGATCTGGGGGAATGCCCTCCTTGTCCTGAATTTTTGCCT-- 1161248 Query 33290 TTTACTGTTTGAATCGTGTCGTTGGGTTGAACGTCCAGAGTTATCGTTTTTCCCGTAAGA 33349 | || | | |||||| || | || ||| || | ||| || |||||||| ||||| Sbjct 1161249 -TCACATTCTCAATCGTATCAGAAGCTTCAACTTCTAAAGTAATAGTTTTTCCAGTAAGG 1161307 Query 33350 GTTTTTACGAAAATTTGCAT 33369 ||||| |||||||||||||| Sbjct 1161308 GTTTTGACGAAAATTTGCAT 1161327 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 318670503278268