Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Habropoda_20laboriosa_20[refseq_20GCF_5F001263275.1_202015-08-13]
27,566 sequences; 296,954,667 total letters
Query= NC_005068.1
Length=110907
Score E
Sequences producing significant alignments: (Bits) Value
seq65 111 1e-19
seq68 109 4e-19
>seq65
Length=771584
Score = 111 bits (122), Expect = 1e-19
Identities = 163/228 (71%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 43895 CCTCCTCTCAATCTTAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTTT 43954
||||||| | || |||||||| || || ||| ||||||||| ||||| ||||| |
Sbjct 536896 CCTCCTCGGAGTCGCAACACCAAGTGCAGTGTGGACTCTTTTTGGATATTGTAATC-TGA 536838
Query 43955 AATTGA-CGCTCATCGTCCAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGG 44013
|| || ||| |||| ||||||||||| || ||||| ||||| || |||||||| ||||
Sbjct 536837 AAGTGTGCGCCCATCTTCCAATTGTTTGCCAGCAAAGATCAAACGCTGCTGGTCGGGAGG 536778
Query 44014 TACACCTTCTTTATCTGAAATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCAC 44073
| |||||||| ||| ||| || || || | | | || |||| | ||| ||
Sbjct 536777 GATTCCTTCTTTGTCTTGAATCTTGGCCTTAACGTTTTCTATTGTGTCTGAAGCCTCAAC 536718
Query 44074 ATCGACCGTAATTGTTTTACCGGTTAAAGTCTTCACAAATATTTGCAT 44121
|||| || || ||||| || || | ||||| || || || |||||
Sbjct 536717 TTCGAGTGTGATGGTTTTCCCTGTGAGCGTCTTGACGAAGATCTGCAT 536670
Score = 111 bits (122), Expect = 1e-19
Identities = 163/228 (71%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 43895 CCTCCTCTCAATCTTAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTTT 43954
||||||| | || |||||||| || || ||| ||||||||| ||||| ||||| |
Sbjct 537352 CCTCCTCGGAGTCGCAACACCAAGTGCAGTGTGGACTCTTTTTGGATATTGTAATC-TGA 537294
Query 43955 AATTGA-CGCTCATCGTCCAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGG 44013
|| | ||| |||| ||||||||||| || ||||| ||||| || |||||||| ||||
Sbjct 537293 AAGGGTGCGCCCATCTTCCAATTGTTTGCCAGCAAAGATCAAACGCTGCTGGTCGGGAGG 537234
Query 44014 TACACCTTCTTTATCTGAAATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCAC 44073
| ||||||||| ||| ||| || || || | | | || |||| | ||| ||
Sbjct 537233 GATACCTTCTTTGTCTTGAATCTTGGCCTTAACGTTTTCTATTGTGTCTGAAGCCTCAAC 537174
Query 44074 ATCGACCGTAATTGTTTTACCGGTTAAAGTCTTCACAAATATTTGCAT 44121
|||| || || ||||| || || | ||||| || || || |||||
Sbjct 537173 TTCGAGTGTGATGGTTTTCCCCGTCAGCGTCTTAACGAAGATCTGCAT 537126
Score = 98.7 bits (108), Expect = 7e-16
Identities = 160/228 (70%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 43895 CCTCCTCTCAATCTTAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTTT 43954
||||||| | || |||||||| || || ||| ||||||||| || || |||||
Sbjct 538492 CCTCCTCGGAGTCGCAACACCAAGTGCAGTGTGGACTCTTTTTGGATGTTGTAATCTGAA 538433
Query 43955 A-ATTGACGCTCATCGTCCAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGG 44013
| | || ||| |||| ||||| ||||| || ||||||||||| || |||||||| ||||
Sbjct 538432 AGAGTG-CGCCCATCTTCCAACTGTTTGCCAGCAAATATCAAACGCTGCTGGTCGGGAGG 538374
Query 44014 TACACCTTCTTTATCTGAAATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCAC 44073
| || ||||| ||| ||| || || || || | | || |||| | ||| ||
Sbjct 538373 GATTCCCTCTTTGTCTTGAATCTTAGCCTTAACGTTATCTATTGTGTCTGAAGCCTCAAC 538314
Query 44074 ATCGACCGTAATTGTTTTACCGGTTAAAGTCTTCACAAATATTTGCAT 44121
|| | || || ||||| || || | || || ||||| || |||||
Sbjct 538313 TTCCAGGGTGATGGTTTTCCCCGTGAGTGTTTTGACAAAGATCTGCAT 538266
Score = 89.7 bits (98), Expect = 4e-13
Identities = 158/228 (69%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 43895 CCTCCTCTCAATCTTAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTTT 43954
||||||| | || ||||||||||| || ||| || ||||| || |||||||| |
Sbjct 537808 CCTCCTCGGAGTCGCAACACCAAATGCAGGGTGGATTCCTTTTGGATGTTATAATC-TGA 537750
Query 43955 AATTG-ACGCTCATCGTCCAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGG 44013
|| | ||| |||| || || ||||| || ||||| ||||| || |||||||| ||||
Sbjct 537749 AAGAGTGCGCCCATCTTCTAACTGTTTGCCAGCAAAGATCAAACGCTGCTGGTCGGGAGG 537690
Query 44014 TACACCTTCTTTATCTGAAATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCAC 44073
| |||||||| ||| ||| || || || | | | || |||| | || ||
Sbjct 537689 GATTCCTTCTTTGTCTTGAATCTTGGCCTTAACGTTCTCTATTGTGTCTGAGGCTTCTAC 537630
Query 44074 ATCGACCGTAATTGTTTTACCGGTTAAAGTCTTCACAAATATTTGCAT 44121
|| | || || ||||| || || | ||||| ||||| || |||||
Sbjct 537629 CTCCAAGGTGATGGTTTTCCCTGTGAGCGTCTTGACAAAGATCTGCAT 537582
>seq68
Length=1848670
Score = 109 bits (120), Expect = 4e-19
Identities = 138/190 (73%), Gaps = 0/190 (0%)
Strand=Plus/Plus
Query 43932 CTTTTTGAATATTATAATCGTTTAATTGACGCTCATCGTCCAATTGTTTTCCTGCAAATA 43991
|||||||||| |||||||| | ||| |||| || || |||||||| ||||| |
Sbjct 812922 CTTTTTGAATGTTATAATCTGACAGAGTACGTCCATCTTCTAACTGTTTTCCAGCAAAAA 812981
Query 43992 TCAACCGTTGCTGGTCCTGAGGTACACCTTCTTTATCTGAAATTTTTTGTTTGACCATAG 44051
| | |||||||| || | || | ||||||||||| ||||||| ||| || |
Sbjct 812982 TGAGACGTTGCTGATCGGGTGGAATTCCTTCTTTATCCTGAATTTTTGCTTTCACATTTT 813041
Query 44052 CAACAGTATCTGCCGGCTCCACATCGACCGTAATTGTTTTACCGGTTAAAGTCTTCACAA 44111
||| |||||| | | ||||| || | ||||| |||||||| || ||||| ||||| |
Sbjct 813042 CAATAGTATCCGATGCTTCCACTTCAAGGGTAATGGTTTTACCCGTCAAAGTTTTCACGA 813101
Query 44112 ATATTTGCAT 44121
|||| |||||
Sbjct 813102 ATATCTGCAT 813111
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 354658408695768
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |