Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Habropoda_20laboriosa_20[refseq_20GCF_5F001263275.1_202015-08-13]
27,566 sequences; 296,954,667 total letters
Query= NC_005839.2
Length=131680
Score E
Sequences producing significant alignments: (Bits) Value
seq65 89.7 4e-13
seq49 84.2 2e-11
>seq65
Length=771584
Score = 89.7 bits (98), Expect = 4e-13
Identities = 149/213 (70%), Gaps = 2/213 (1%)
Strand=Plus/Minus
Query 48515 AACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGT-CGCTCGTC 48573
|||||||| || |||||| ||||||||| ||||| ||||| | || ||| ||| | ||
Sbjct 538021 AACACTAAGTGCAGTGTGGACTCCTTTTGGATGTTATAATCTGA-AAGTGTGCGCCCATC 537963
Query 48574 CTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTC 48633
|||| ||| || || | | || ||||||||||| || || | | ||| |||||
Sbjct 537962 TTCCAACTGTTTGCCAGCAAAGATCAAACGCTGCTGGTCGGGAGGGATTCCTTCTTTGTC 537903
Query 48634 CATAATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGT 48693
||| || ||| | | |||| || || | || ||| || | || |||||
Sbjct 537902 TTGAATCTTGGCCTTAACGTTCTCTATTGTGTCTGAAGCCTCAACGTCCAGGGTGATGGT 537843
Query 48694 TTTACCGGTGAGAGTTTTCACAAAAATCTGCAT 48726
||| || ||||| ||||| ||||| ||||||||
Sbjct 537842 TTTCCCCGTGAGCGTTTTGACAAAGATCTGCAT 537810
Score = 84.2 bits (92), Expect = 2e-11
Identities = 148/213 (69%), Gaps = 2/213 (1%)
Strand=Plus/Minus
Query 48515 AACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGT-CGCTCGTC 48573
||||| || || || ||| ||||||||| || |||||||| | || ||| ||| | ||
Sbjct 537109 AACACCAAGTGCAGGGTGGACTCCTTTTGGATATTGTAATCTGA-AAGTGTGCGCCCATC 537051
Query 48574 CTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTC 48633
|||| ||| ||||| | | || ||||||||||| || || | | ||| |||||
Sbjct 537050 TTCCAACTGTTTACCAGCAAAGATCAAACGCTGCTGGTCGGGAGGGATTCCTTCTTTGTC 536991
Query 48634 CATAATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGT 48693
||| || ||| | | |||| || || | || ||| |||| ||| |||||
Sbjct 536990 TTGAATCTTGGCCTTAACGTTCTCTATTGTGTCTGAAGCCTCAACTTCGAGTGTGATGGT 536931
Query 48694 TTTACCGGTGAGAGTTTTCACAAAAATCTGCAT 48726
||| || ||||| || || || || ||||||||
Sbjct 536930 TTTCCCTGTGAGCGTCTTGACGAAGATCTGCAT 536898
>seq49
Length=1886280
Score = 84.2 bits (92), Expect = 2e-11
Identities = 143/205 (70%), Gaps = 2/205 (1%)
Strand=Plus/Plus
Query 48523 ATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGT-CGCTCGTCCTCCAGCT 48581
|||||| || ||||| ||||| || || || || || ||| || |||| || ||||
Sbjct 1162026 ATGAAGAGTTGATTCCTTCTGAATATTATAGTCTGC-AAGTGTGCGTCCGTCTTCAAGCT 1162084
Query 48582 GCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTT 48641
||||||| || |||| || | ||| ||||| || | || |||||||||| |||||
Sbjct 1162085 GCTTACCAGCGAAAATCAATCTCTGTTGATCAGGTGGAATACCTTCCTTGTCCTGAATTT 1162144
Query 48642 TCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCGG 48701
| ||| | | | | || ||||| | || || || | || || || || || |
Sbjct 1162145 TTGCCTTCACATTCTCAATTGTATCAGAAGCTTCAACTTCTAAAGTGATTGTCTTTCCCG 1162204
Query 48702 TGAGAGTTTTCACAAAAATCTGCAT 48726
|||||||||| || ||||| |||||
Sbjct 1162205 TGAGAGTTTTAACGAAAATTTGCAT 1162229
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 421109676183566
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |