Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Habropoda_20laboriosa_20[refseq_20GCF_5F001263275.1_202015-08-13]
27,566 sequences; 296,954,667 total letters
Query= NC_005902.1
Length=186250
Score E
Sequences producing significant alignments: (Bits) Value
seq400 136 5e-27
seq151 96.9 4e-15
>seq400
Length=2387259
Score = 136 bits (150), Expect = 5e-27
Identities = 213/302 (71%), Gaps = 6/302 (2%)
Strand=Plus/Plus
Query 164395 TGGAATTTTGAAGAAATGGGAGTAGGTGGACTAGATCGAGAATTTTCTCTTATTTTCAGA 164454
||| |||| | |||||||| | |||||||| ||| ||| ||| | |||||| ||
Sbjct 452415 TGGGATTTCCAGAAAATGGGAATTGGTGGACTGGATAAAGAGTTTAGTGCTATTTTTCGA 452474
Query 164455 CGAGCATTTGCTTCTAGATCAGTTCCTATCGAAATAATaaaaaaaTTAGGCTGTAAACAT 164514
|||||||||| || || |||| || || | | | |||| || |||||||||
Sbjct 452475 AGAGCATTTGCATCACGAGTTTTTCCGCCAGAGATTGTTACACAATTGGGATGTAAACAT 452534
Query 164515 ATAAAAGGAATTTTATTACATGGACCTCCTGGTTGCGGTAAAACATTAATGGCTCGATGC 164574
|||||||||||||| | |||| ||||||||| || |||||||||||||| |||
Sbjct 452535 GTAAAAGGAATTTTACTTTATGGTCCTCCTGGTACAGGCAAAACATTAATGGCACGACAA 452594
Query 164575 ATTGCTCAAGCTTTTAAA---TCGCGACCCGTTAAAATTGTTAATGGTCCTGAATTATTG 164631
|| | || | ||||| | | || || |||||| || ||||| ||| || | |||
Sbjct 452595 ATAG-GCACTATGTTAAATGCTAGAGAACC--TAAAATCGTCAATGGCCCTCAAATTTTG 452651
Query 164632 AACAAATATGTAGGTGAGTCAGAAGCTAATGTTAGAAAGTTGTTTCAGGAGGCTGAAGAA 164691
| |||||||| || || ||||||||| |||| | || ||| || ||||||||
Sbjct 452652 GATAAATATGTTGGGGAAAGTGAAGCTAATATTAGGAGATTATTTGCTGATGCTGAAGAC 452711
Query 164692 GA 164693
||
Sbjct 452712 GA 452713
Score = 125 bits (138), Expect = 9e-24
Identities = 259/391 (66%), Gaps = 42/391 (11%)
Strand=Plus/Plus
Query 164715 TAGTAAATTACATGTTATTGTTTTTGATGAGATAGATGCTCTTTGCAAAAAACGTGGT-- 164772
|||| ||| ||| | ||| ||||||| || || |||||| |||| ||| || |||
Sbjct 452818 TAGTGGATTGCATATCATTATTTTTGACGAAATTGATGCTATTTGTAAATCTCGAGGTAG 452877
Query 164773 --------GATA-ATATTA-TTCATGATGCAGTGGTTAATCAGTTGCTTTCTAAAATAGA 164822
|| | | | | |||||||| | || || ||||| || ||| | ||||| ||
Sbjct 452878 CGTTGCTGGAAATACAGGAGTTCATGATACCGTTGTAAATCAATTACTTGCAAAAATTGA 452937
Query 164823 TGGTGTAGAATCCTTAAATAATATTTTAATTGTAGGTATGACCAACCGACCTGATTTAAT 164882
|||||||||| |||||||||||| | || | |||||||| || || ||| | ||
Sbjct 452938 TGGTGTAGAACAATTAAATAATATTCTTGTTATTGGTATGACTAATAGAAGAGATATGAT 452997
Query 164883 TGATGATGCTTTATTACGACCTGGTCGATTAGAATTGAAAATAGAAATAGGATTACCCGA 164942
|||||| || ||||||||||||||| |||| | || ||
Sbjct 452998 TGATGAAGCCTTATTACGACCTGGTAGATTGG----------------AGCAT------- 453034
Query 164943 CAAAGAAGGACGCCTTCAAATTTTAAAAGTTCATGTGGCTAAAATGAAATCCTGTGATAT 165002
||||| ||||||| | || ||||| | ||||| | | | | |
Sbjct 453035 -------GGACGATTTCAAATCCTTAATATTCATACATTCAGAATGAGAGATTATAAGAA 453087
Query 165003 ATTATCTCCCGATGTAGATTTAAATAAAATAGCTGCCGAAACTAAAAATTATAGTGGTGC 165062
| |||| || ||||| ||||| || || ||||| | ||||||||||| |||||||||
Sbjct 453088 AATATCACCTGATGTTGATTTGAAAGAATTAGCTACACTAACTAAAAATTTTAGTGGTGC 453147
Query 165063 TGAATTAGAGGGATTAGTAAGAGCCGCTCAA 165093
|||||| || || ||||| ||||| || |||
Sbjct 453148 TGAATTGGAAGGTTTAGTTAGAGCTGCACAA 453178
>seq151
Length=1873176
Score = 96.9 bits (106), Expect = 4e-15
Identities = 173/247 (70%), Gaps = 17/247 (7%)
Strand=Plus/Plus
Query 6910 TATGTTAATAATGCATAAGAAGCTACATTAAAAGGTACACCTAATCCCATATCTGCTGAT 6969
|| ||||||| | ||| || |||| |||||| |||||||| | |||||||| || |
Sbjct 1665413 TAAGTTAATAGAGAATAGGATGCTATATTAAATGGTACACCAAGACCCATATCGGCGCTT 1665472
Query 6970 CTTTGATAACATTGACAAGATAAAATATTGTCTATAGC----ATAAAATTGACACAATAC 7025
||||||||| ||||| ||||| || || || || |||||| ||| |||| ||
Sbjct 1665473 CTTTGATAAAGCTGACATGATAA----TTCTCCATTGCTCACATAAAACTGA-ACAAAAC 1665527
Query 7026 A-TGACATGGAGGTAAAACAGCCTGATCT---ATATCAGATGGATTCCAAGCAGTCATTA 7081
| || ||||| |||| ||| | | |||||| |||||||| || | |||||
Sbjct 1665528 AATGGCATGGGGGTAGT---GCCATTTTTGGAATATCAACAGGATTCCATGCTGACATTA 1665584
Query 7082 AAATACGTCTATCATTTGGATTTGTTTTTAATTTTGTTATAATTATTTGTAATTGATCTA 7141
||| | ||||||||||||| | ||| || ||| |||| || |||||||| |
Sbjct 1665585 TAATTCTTCTATCATTTGGAGAATGTCGTAACTTATTTACAATTTCTTTCAATTGATCAA 1665644
Query 7142 TACCCTG 7148
| |||||
Sbjct 1665645 T-CCCTG 1665650
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 595666677405600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |