Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Habropoda_20laboriosa_20[refseq_20GCF_5F001263275.1_202015-08-13] 27,566 sequences; 296,954,667 total letters Query= NC_005902.1 Length=186250 Score E Sequences producing significant alignments: (Bits) Value seq400 136 5e-27 seq151 96.9 4e-15 >seq400 Length=2387259 Score = 136 bits (150), Expect = 5e-27 Identities = 213/302 (71%), Gaps = 6/302 (2%) Strand=Plus/Plus Query 164395 TGGAATTTTGAAGAAATGGGAGTAGGTGGACTAGATCGAGAATTTTCTCTTATTTTCAGA 164454 ||| |||| | |||||||| | |||||||| ||| ||| ||| | |||||| || Sbjct 452415 TGGGATTTCCAGAAAATGGGAATTGGTGGACTGGATAAAGAGTTTAGTGCTATTTTTCGA 452474 Query 164455 CGAGCATTTGCTTCTAGATCAGTTCCTATCGAAATAATaaaaaaaTTAGGCTGTAAACAT 164514 |||||||||| || || |||| || || | | | |||| || ||||||||| Sbjct 452475 AGAGCATTTGCATCACGAGTTTTTCCGCCAGAGATTGTTACACAATTGGGATGTAAACAT 452534 Query 164515 ATAAAAGGAATTTTATTACATGGACCTCCTGGTTGCGGTAAAACATTAATGGCTCGATGC 164574 |||||||||||||| | |||| ||||||||| || |||||||||||||| ||| Sbjct 452535 GTAAAAGGAATTTTACTTTATGGTCCTCCTGGTACAGGCAAAACATTAATGGCACGACAA 452594 Query 164575 ATTGCTCAAGCTTTTAAA---TCGCGACCCGTTAAAATTGTTAATGGTCCTGAATTATTG 164631 || | || | ||||| | | || || |||||| || ||||| ||| || | ||| Sbjct 452595 ATAG-GCACTATGTTAAATGCTAGAGAACC--TAAAATCGTCAATGGCCCTCAAATTTTG 452651 Query 164632 AACAAATATGTAGGTGAGTCAGAAGCTAATGTTAGAAAGTTGTTTCAGGAGGCTGAAGAA 164691 | |||||||| || || ||||||||| |||| | || ||| || |||||||| Sbjct 452652 GATAAATATGTTGGGGAAAGTGAAGCTAATATTAGGAGATTATTTGCTGATGCTGAAGAC 452711 Query 164692 GA 164693 || Sbjct 452712 GA 452713 Score = 125 bits (138), Expect = 9e-24 Identities = 259/391 (66%), Gaps = 42/391 (11%) Strand=Plus/Plus Query 164715 TAGTAAATTACATGTTATTGTTTTTGATGAGATAGATGCTCTTTGCAAAAAACGTGGT-- 164772 |||| ||| ||| | ||| ||||||| || || |||||| |||| ||| || ||| Sbjct 452818 TAGTGGATTGCATATCATTATTTTTGACGAAATTGATGCTATTTGTAAATCTCGAGGTAG 452877 Query 164773 --------GATA-ATATTA-TTCATGATGCAGTGGTTAATCAGTTGCTTTCTAAAATAGA 164822 || | | | | |||||||| | || || ||||| || ||| | ||||| || Sbjct 452878 CGTTGCTGGAAATACAGGAGTTCATGATACCGTTGTAAATCAATTACTTGCAAAAATTGA 452937 Query 164823 TGGTGTAGAATCCTTAAATAATATTTTAATTGTAGGTATGACCAACCGACCTGATTTAAT 164882 |||||||||| |||||||||||| | || | |||||||| || || ||| | || Sbjct 452938 TGGTGTAGAACAATTAAATAATATTCTTGTTATTGGTATGACTAATAGAAGAGATATGAT 452997 Query 164883 TGATGATGCTTTATTACGACCTGGTCGATTAGAATTGAAAATAGAAATAGGATTACCCGA 164942 |||||| || ||||||||||||||| |||| | || || Sbjct 452998 TGATGAAGCCTTATTACGACCTGGTAGATTGG----------------AGCAT------- 453034 Query 164943 CAAAGAAGGACGCCTTCAAATTTTAAAAGTTCATGTGGCTAAAATGAAATCCTGTGATAT 165002 ||||| ||||||| | || ||||| | ||||| | | | | | Sbjct 453035 -------GGACGATTTCAAATCCTTAATATTCATACATTCAGAATGAGAGATTATAAGAA 453087 Query 165003 ATTATCTCCCGATGTAGATTTAAATAAAATAGCTGCCGAAACTAAAAATTATAGTGGTGC 165062 | |||| || ||||| ||||| || || ||||| | ||||||||||| ||||||||| Sbjct 453088 AATATCACCTGATGTTGATTTGAAAGAATTAGCTACACTAACTAAAAATTTTAGTGGTGC 453147 Query 165063 TGAATTAGAGGGATTAGTAAGAGCCGCTCAA 165093 |||||| || || ||||| ||||| || ||| Sbjct 453148 TGAATTGGAAGGTTTAGTTAGAGCTGCACAA 453178 >seq151 Length=1873176 Score = 96.9 bits (106), Expect = 4e-15 Identities = 173/247 (70%), Gaps = 17/247 (7%) Strand=Plus/Plus Query 6910 TATGTTAATAATGCATAAGAAGCTACATTAAAAGGTACACCTAATCCCATATCTGCTGAT 6969 || ||||||| | ||| || |||| |||||| |||||||| | |||||||| || | Sbjct 1665413 TAAGTTAATAGAGAATAGGATGCTATATTAAATGGTACACCAAGACCCATATCGGCGCTT 1665472 Query 6970 CTTTGATAACATTGACAAGATAAAATATTGTCTATAGC----ATAAAATTGACACAATAC 7025 ||||||||| ||||| ||||| || || || || |||||| ||| |||| || Sbjct 1665473 CTTTGATAAAGCTGACATGATAA----TTCTCCATTGCTCACATAAAACTGA-ACAAAAC 1665527 Query 7026 A-TGACATGGAGGTAAAACAGCCTGATCT---ATATCAGATGGATTCCAAGCAGTCATTA 7081 | || ||||| |||| ||| | | |||||| |||||||| || | ||||| Sbjct 1665528 AATGGCATGGGGGTAGT---GCCATTTTTGGAATATCAACAGGATTCCATGCTGACATTA 1665584 Query 7082 AAATACGTCTATCATTTGGATTTGTTTTTAATTTTGTTATAATTATTTGTAATTGATCTA 7141 ||| | ||||||||||||| | ||| || ||| |||| || |||||||| | Sbjct 1665585 TAATTCTTCTATCATTTGGAGAATGTCGTAACTTATTTACAATTTCTTTCAATTGATCAA 1665644 Query 7142 TACCCTG 7148 | ||||| Sbjct 1665645 T-CCCTG 1665650 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595666677405600