Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Habropoda_20laboriosa_20[refseq_20GCF_5F001263275.1_202015-08-13]
27,566 sequences; 296,954,667 total letters
Query= NC_005905.1
Length=86462
Score E
Sequences producing significant alignments: (Bits) Value
seq146 262 2e-65
>seq146
Length=9480515
Score = 262 bits (290), Expect = 2e-65
Identities = 416/595 (70%), Gaps = 11/595 (2%)
Strand=Plus/Plus
Query 3550 TGCTGTAAAAATGGCAAACATTGATCATGCAACGAATTTCGTATTTACA---CGATTGAA 3606
|||||| ||||||||||| || ||| | ||| |||||| | ||||| | | |||
Sbjct 8679931 TGCTGTTAAAATGGCAAATATAGATAAAGCATGTAATTTCATGTTTACTAATCCAAAGAA 8679990
Query 3607 TGATGGATCAAATGAATTGATATATTTTGCTGACGTATGCGCTGGTCCAGGTGGTTTCAG 3666
| | ||||| | ||||||| || || ||||| ||||| ||||||||||||||
Sbjct 8679991 CTTAGCAAACAATGAGCTATTATATTTCGCAGATGTATGTGCTGGACCAGGTGGTTTCAG 8680050
Query 3667 TGAATATATGTTATGGAGAAAGAAATGGAATATCAAAGGTTATGGTATGACGTTACGCGa 3726
||||||| | ||||||| ||| || ||| || |||||| | ||| | || ||| |
Sbjct 8680051 TGAATATGTTTTATGGAAAAAAAAGTGGCATGCCAAAGGATTTGGCCTTACTTTA----A 8680106
Query 3727 aaaa----aaTGATTTTCAACTGAACAGATTTTACGATAACTTTTCGGAAACTTTACACC 3782
|||| || || ||| |||| | ||||| | | || ||||| || || |
Sbjct 8680107 AAAATGATAAGGACTTTAAACTAGATGATTTTTATGCAGGCCCTTGTGAAACATTTCATC 8680166
Query 3783 CGTATTATGGTCCGCTTAACGATGGTAATATCTACAATTCACAAAATCAGAAAGGTTTTT 3842
|||||||||| || | ||||| || | || || | ||||| ||| |||
Sbjct 8680167 CGTATTATGGACCAAAAGAAAATGGTGATGTTTATGATCCCAGTAATCAAGAAGCTTTCA 8680226
Query 3843 GTGAAATGATTATGAAAGATACCGAAGGAAAAGGTGTACATTTTATGATGGCTGACGGTG 3902
|| || || |||| | | || | || ||||| |||||||||||||||||||| || |
Sbjct 8680227 AAGATATCATAATGACACACACTCATGGTAAAGGAGTACATTTTATGATGGCTGATGGAG 8680286
Query 3903 GGTTCTCGGTTGAGGGTCAAGAAAATATGCAAGAAATGTTATCGAAAAAGATGTATTTGT 3962
| || || || || | |||||||| |||| || || | || ||| | ||||| | |
Sbjct 8680287 GATTTTCAGTAGAAGATCAAGAAATGCTGCAGGAGATTCTTTCAAAACAATTGTATCTTT 8680346
Query 3963 GTCAATGTTTAATTGCATTGATGATCATACGAATTGGTGGTCATTGTGTTATCAAATTTT 4022
|||||||| || | ||||| ||||| || |||| | ||||||| ||||| || | |
Sbjct 8680347 GTCAATGTATAGTAGCATTAATGATTGTAAGAATAAGAGGTCATTTTGTTACAAAGCTAT 8680406
Query 4023 TCGATATATTTACACCTTTTAGTGCTGGTTTAGTGTATTTGATGTATAGATCTTTTAATC 4082
| || | |||||||| |||||||| |||||||| || || |||||| | | |||| |
Sbjct 8680407 TTGACCTGTTTACACCGTTTAGTGCGGGTTTAGTTTACTTAATGTATCGTTGTTTTGAAG 8680466
Query 4083 GTATTTGTATTTTCAAACCACATTCATCGCGACCGGCCAATTCTGAAAGATATTT 4137
|||||||||| |||||| | || || ||||| || ||||| ||| | |||||
Sbjct 8680467 AAGTTTGTATTTTTAAACCAAACTCTTCTCGACCAGCAAATTCAGAACGTTATTT 8680521
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 276460688879698
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |