Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Habropoda_20laboriosa_20[refseq_20GCF_5F001263275.1_202015-08-13] 27,566 sequences; 296,954,667 total letters Query= NC_005905.1 Length=86462 Score E Sequences producing significant alignments: (Bits) Value seq146 262 2e-65 >seq146 Length=9480515 Score = 262 bits (290), Expect = 2e-65 Identities = 416/595 (70%), Gaps = 11/595 (2%) Strand=Plus/Plus Query 3550 TGCTGTAAAAATGGCAAACATTGATCATGCAACGAATTTCGTATTTACA---CGATTGAA 3606 |||||| ||||||||||| || ||| | ||| |||||| | ||||| | | ||| Sbjct 8679931 TGCTGTTAAAATGGCAAATATAGATAAAGCATGTAATTTCATGTTTACTAATCCAAAGAA 8679990 Query 3607 TGATGGATCAAATGAATTGATATATTTTGCTGACGTATGCGCTGGTCCAGGTGGTTTCAG 3666 | | ||||| | ||||||| || || ||||| ||||| |||||||||||||| Sbjct 8679991 CTTAGCAAACAATGAGCTATTATATTTCGCAGATGTATGTGCTGGACCAGGTGGTTTCAG 8680050 Query 3667 TGAATATATGTTATGGAGAAAGAAATGGAATATCAAAGGTTATGGTATGACGTTACGCGa 3726 ||||||| | ||||||| ||| || ||| || |||||| | ||| | || ||| | Sbjct 8680051 TGAATATGTTTTATGGAAAAAAAAGTGGCATGCCAAAGGATTTGGCCTTACTTTA----A 8680106 Query 3727 aaaa----aaTGATTTTCAACTGAACAGATTTTACGATAACTTTTCGGAAACTTTACACC 3782 |||| || || ||| |||| | ||||| | | || ||||| || || | Sbjct 8680107 AAAATGATAAGGACTTTAAACTAGATGATTTTTATGCAGGCCCTTGTGAAACATTTCATC 8680166 Query 3783 CGTATTATGGTCCGCTTAACGATGGTAATATCTACAATTCACAAAATCAGAAAGGTTTTT 3842 |||||||||| || | ||||| || | || || | ||||| ||| ||| Sbjct 8680167 CGTATTATGGACCAAAAGAAAATGGTGATGTTTATGATCCCAGTAATCAAGAAGCTTTCA 8680226 Query 3843 GTGAAATGATTATGAAAGATACCGAAGGAAAAGGTGTACATTTTATGATGGCTGACGGTG 3902 || || || |||| | | || | || ||||| |||||||||||||||||||| || | Sbjct 8680227 AAGATATCATAATGACACACACTCATGGTAAAGGAGTACATTTTATGATGGCTGATGGAG 8680286 Query 3903 GGTTCTCGGTTGAGGGTCAAGAAAATATGCAAGAAATGTTATCGAAAAAGATGTATTTGT 3962 | || || || || | |||||||| |||| || || | || ||| | ||||| | | Sbjct 8680287 GATTTTCAGTAGAAGATCAAGAAATGCTGCAGGAGATTCTTTCAAAACAATTGTATCTTT 8680346 Query 3963 GTCAATGTTTAATTGCATTGATGATCATACGAATTGGTGGTCATTGTGTTATCAAATTTT 4022 |||||||| || | ||||| ||||| || |||| | ||||||| ||||| || | | Sbjct 8680347 GTCAATGTATAGTAGCATTAATGATTGTAAGAATAAGAGGTCATTTTGTTACAAAGCTAT 8680406 Query 4023 TCGATATATTTACACCTTTTAGTGCTGGTTTAGTGTATTTGATGTATAGATCTTTTAATC 4082 | || | |||||||| |||||||| |||||||| || || |||||| | | |||| | Sbjct 8680407 TTGACCTGTTTACACCGTTTAGTGCGGGTTTAGTTTACTTAATGTATCGTTGTTTTGAAG 8680466 Query 4083 GTATTTGTATTTTCAAACCACATTCATCGCGACCGGCCAATTCTGAAAGATATTT 4137 |||||||||| |||||| | || || ||||| || ||||| ||| | ||||| Sbjct 8680467 AAGTTTGTATTTTTAAACCAAACTCTTCTCGACCAGCAAATTCAGAACGTTATTT 8680521 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 276460688879698