Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Habropoda_20laboriosa_20[refseq_20GCF_5F001263275.1_202015-08-13]
27,566 sequences; 296,954,667 total letters
Query= NC_006639.1
Length=24748
Score E
Sequences producing significant alignments: (Bits) Value
seq75 203 5e-48
>seq75
Length=5967246
Score = 203 bits (224), Expect = 5e-48
Identities = 205/267 (77%), Gaps = 0/267 (0%)
Strand=Plus/Minus
Query 16433 GCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATC 16492
|| ||||||||| | | ||| || ||||||||||| || || || || ||||| ||
Sbjct 3098689 GCGAAGCGTCATAGGAAGGTTCTGCGTGATAACATCCAGGGTATTACAAAACCAGCCATT 3098630
Query 16493 CGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATT 16552
|| ||||| |||||||||||||| ||||||||| | ||||||||| | || ||||||| |
Sbjct 3098629 CGCCGTCTTGCTCGTCGTGGTGGTGTCAAGCGTATTTCTGGATTGATTTACGAAGAGACT 3098570
Query 16553 CGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAG 16612
|||| |||| ||||| | ||||| ||| |||||| | ||||||| || ||| || |||
Sbjct 3098569 CGTGGTGTTCTGAAGGTTTTCCTTGAGAACGTTATTCGTGATGCTGTCACCTACACGGAG 3098510
Query 16613 CACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGC 16672
|||||||| | || || || || | ||||| |||||||||| |||| |||||||||
Sbjct 3098509 CACGCTAAGAGGAAAACCGTTACTGCTATGGACGTCGTCTATGCTCTGAAGCGTCAAGGC 3098450
Query 16673 CGTAAGATTTATGGTTTTGGAAGTTAA 16699
| | | || || |||||| |||||
Sbjct 3098449 AGAACTCTGTACGGATTTGGAGGTTAA 3098423
Score = 197 bits (218), Expect = 2e-46
Identities = 204/267 (76%), Gaps = 0/267 (0%)
Strand=Plus/Plus
Query 16433 GCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATC 16492
|| ||||||||| | | | ||||| ||||||||||| |||||||| ||||||||||||
Sbjct 1367277 GCAAAGCGTCATAGAAAAGTACTTCGTGATAACATCCAGGGAATCACGAAGCCAGCTATC 1367336
Query 16493 CGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATT 16552
||||| |||||||||||||||| ||||| || | ||||| ||| | || ||||| | |
Sbjct 1367337 CGTCGATTGGCTCGTCGTGGTGGTGTCAAACGAATATCTGGCTTGATTTACGAAGAAACT 1367396
Query 16553 CGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAG 16612
|||| ||||||||| | || || | | ||| || | ||| || || || ||||||
Sbjct 1367397 CGTGGTGTTTTGAAAGTTTTTCTGGAAAACGTCATTCGTGACGCAGTCACATACACCGAG 1367456
Query 16613 CACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGC 16672
||||||||||| ||||| || || | |||||| | || ||||| |||| | |||||
Sbjct 1367457 CACGCTAAACGAAAGACCGTAACAGCTATGGATGTAGTATATGCTCTGAAGAGGCAAGGA 1367516
Query 16673 CGTAAGATTTATGGTTTTGGAAGTTAA 16699
|| | | | || ||||||||| |||||
Sbjct 1367517 CGCACGCTCTACGGTTTTGGAGGTTAA 1367543
Score = 104 bits (114), Expect = 4e-18
Identities = 119/158 (75%), Gaps = 3/158 (2%)
Strand=Plus/Minus
Query 16433 GCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATC 16492
|| ||||||||| | | ||| || ||||| || ||||| ||||| || |||||||||
Sbjct 3101086 GCCAAGCGTCATAGGAAGGTTCTGCGTGATAATATTCAAGGTATCACGAAACCAGCTATC 3101027
Query 16493 CGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGA--AGAGA 16550
|||| | ||||||| || ||||| ||||| ||| | ||||| || |||| || |||||
Sbjct 3101026 CGTCATTTGGCTCGCCGAGGTGGTGTCAAACGTATTTCTGGTTTAATCTACGAAGAGAGA 3100967
Query 16551 TTCGT-GATGTTTTGAAGATCTTCCTCAAGACCGTTAT 16587
||| | |||| | ||| | ||||| ||| ||||||
Sbjct 3100966 CCCGTGGGTGTTCTAAAGGTTTTCCTTGAGAACGTTAT 3100929
Score = 102 bits (112), Expect = 1e-17
Identities = 170/246 (69%), Gaps = 0/246 (0%)
Strand=Plus/Plus
Query 16454 CTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGT 16513
|| || ||||| || ||||||||||||||||| ||||| || || ||||| | | |||
Sbjct 1362502 CTGCGTGATAATATTCAAGGAATCACCAAGCCGGCTATTCGACGACTGGCAAGAAGAGGT 1362561
Query 16514 GGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTC 16573
|| || || | | ||| ||| | || ||||| | |||| |||||||| | ||
Sbjct 1362562 GGCGTTAAAAGAATTAGTGGCTTGATTTACGAAGAAACACGTGGAGTTTTGAAAGTATTT 1362621
Query 16574 CTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTC 16633
|| | | ||||| | |||||| | ||||| || || || || | || || ||
Sbjct 1362622 CTTGAAAATGTTATTCGAGATGCTGTTACGTATACAGAACATGCAAAGAGGAAAACCGTG 1362681
Query 16634 ACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGGA 16693
|| | ||||| | || ||||||||||| || |||||| | | | || ||||||||
Sbjct 1362682 ACAGCGATGGACGTAGTTTATGCATTGAAGCGCCAAGGCAGAACACTCTACGGTTTTGGT 1362741
Query 16694 AGTTAA 16699
|||||
Sbjct 1362742 GGTTAA 1362747
Score = 80.6 bits (88), Expect = 4e-11
Identities = 83/109 (76%), Gaps = 0/109 (0%)
Strand=Plus/Minus
Query 16591 TGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGT 16650
||| ||| || ||||||||| |||||||| | |||||||| | | | |||||| | ||
Sbjct 3100824 TGACGCTGTCACCTATACCGAACACGCTAAGAGGAAGACTGTTATCGCTATGGATGTTGT 3100765
Query 16651 CTATGCATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGGAAGTTAA 16699
||| || |||||||||||||| | | | || |||||||| |||||
Sbjct 3100764 CTACGCTCTGAAACGTCAAGGCAGAACCCTCTACGGTTTTGGCGGTTAA 3100716
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 79049996213238
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |