Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Habropoda_20laboriosa_20[refseq_20GCF_5F001263275.1_202015-08-13]
27,566 sequences; 296,954,667 total letters
Query= NC_006966.1
Length=166259
Score E
Sequences producing significant alignments: (Bits) Value
seq284 114 1e-20
>seq284
Length=1419496
Score = 114 bits (126), Expect = 1e-20
Identities = 114/148 (77%), Gaps = 0/148 (0%)
Strand=Plus/Minus
Query 21127 TTAAAAATCAGCATCTAATGAGAAAACATTATCTTCtttttttGACATAATTCCCATTTT 21186
|||||| ||||||| | || ||| | ||| ||| |||| ||| | |||| |||
Sbjct 891104 TTAAAAGTCAGCATTAACTGTAAAATTGCTCTCTATTTTGTTTGCCATCACTCCCCATTT 891045
Query 21187 TTGATAATCACTAACTCTTTTTTCGAAAAAATTTGTCTTTCCTTCCAATGATATAGATTC 21246
|||||| || | |||| |||| |||||||| || ||||| |||||||| || ||| |||
Sbjct 891044 TTGATATTCTCCAACTTTTTTCTCGAAAAAGTTCGTCTTACCTTCCAAAGAAATATGTTC 890985
Query 21247 CATAAAATCAAATGGATTTTCAGATTTA 21274
||| ||||| ||||||||||| ||||||
Sbjct 890984 CATGAAATCGAATGGATTTTCTGATTTA 890957
Score = 93.3 bits (102), Expect = 4e-14
Identities = 137/194 (71%), Gaps = 0/194 (0%)
Strand=Plus/Minus
Query 21770 TACATTTCAGAATGTATATTTTCTATCGCTATCTGAAATCCGTAAAAACATCTTGCCTCT 21829
|||||||| || || | |||||| || || | ||||| || ||||| || | |||||||
Sbjct 890211 TACATTTCTGAGTGCACATTTTCCATTGCAACTTGAAAGCCATAAAAGCAACGTGCCTCT 890152
Query 21830 GAACATTGAACCTCGGAATAAAATCGTTGAGCCAAGTTTTCATTTACTATTCCATCACTG 21889
| ||| ||||| |||||||| | | | |||||||| || |||||||||
Sbjct 890151 GTTATTTGCACCTCCTGGCTAAATCGTTCAACAAGATTTTCATTGACAATTCCATCAGAA 890092
Query 21890 GCGGCAAAAAATGCCAATATATTTTTTATAAAATATCGTTCGTTATCTGTTAATTTTTTC 21949
|| ||||||||||| |||| || | |||||| | | || | ||||| | |||
Sbjct 890091 GCAGCAAAAAATGCTAATACATGTGATATAAATTTTTTCTCACTGATAGTTAAACTGTTC 890032
Query 21950 CAATCTAATAAATC 21963
|| || ||||||||
Sbjct 890031 CAGTCAAATAAATC 890018
Score = 86.0 bits (94), Expect = 7e-12
Identities = 139/195 (71%), Gaps = 10/195 (5%)
Strand=Plus/Minus
Query 21495 AACCTTCATCCCTACTTATTAATTCATTAGAAAATGTTAAACCGGGCATTAATCCTCTCT 21554
||||| |||| ||| || | ||||||| ||||| | || ||||| | ||||||||
Sbjct 890560 AACCT-CATCTCTAGAAATGAGTTCATTACTGAATGTAAGGCCTGGCATAAGTCCTCTCT 890502
Query 21555 TTTTTAACCAAAATATTGACGCAAATGCTCCTGAAAAGAAAATGCCCTCAACGGCAGCAA 21614
| ||||||||||| || | ||||| || ||||||||| || || || |||||||
Sbjct 890501 TCTTTAACCAAAAAATGGCAGCAAAACTACCACTAAAGAAAATACCTTCCACTGCAGCAA 890442
Query 21615 ATGCAACTAATCGTTC----ACCGTATGTAGATTCTTTATCCAATATCCATTTTTCTGCC 21670
|||||| || ||||| | ||| | || ||| | || |||||| ||| ||||
Sbjct 890441 ATGCAATTACACGTTCGGGAAAGGTA-GCAGTTTCATGAT---TTATCCAATTTAATGCC 890386
Query 21671 CATTTTGCCTTTTCT 21685
|| || | |||||||
Sbjct 890385 CAATTAG-CTTTTCT 890372
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 531717520281840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |