Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Habropoda_20laboriosa_20[refseq_20GCF_5F001263275.1_202015-08-13] 27,566 sequences; 296,954,667 total letters Query= NC_006966.1 Length=166259 Score E Sequences producing significant alignments: (Bits) Value seq284 114 1e-20 >seq284 Length=1419496 Score = 114 bits (126), Expect = 1e-20 Identities = 114/148 (77%), Gaps = 0/148 (0%) Strand=Plus/Minus Query 21127 TTAAAAATCAGCATCTAATGAGAAAACATTATCTTCtttttttGACATAATTCCCATTTT 21186 |||||| ||||||| | || ||| | ||| ||| |||| ||| | |||| ||| Sbjct 891104 TTAAAAGTCAGCATTAACTGTAAAATTGCTCTCTATTTTGTTTGCCATCACTCCCCATTT 891045 Query 21187 TTGATAATCACTAACTCTTTTTTCGAAAAAATTTGTCTTTCCTTCCAATGATATAGATTC 21246 |||||| || | |||| |||| |||||||| || ||||| |||||||| || ||| ||| Sbjct 891044 TTGATATTCTCCAACTTTTTTCTCGAAAAAGTTCGTCTTACCTTCCAAAGAAATATGTTC 890985 Query 21247 CATAAAATCAAATGGATTTTCAGATTTA 21274 ||| ||||| ||||||||||| |||||| Sbjct 890984 CATGAAATCGAATGGATTTTCTGATTTA 890957 Score = 93.3 bits (102), Expect = 4e-14 Identities = 137/194 (71%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 21770 TACATTTCAGAATGTATATTTTCTATCGCTATCTGAAATCCGTAAAAACATCTTGCCTCT 21829 |||||||| || || | |||||| || || | ||||| || ||||| || | ||||||| Sbjct 890211 TACATTTCTGAGTGCACATTTTCCATTGCAACTTGAAAGCCATAAAAGCAACGTGCCTCT 890152 Query 21830 GAACATTGAACCTCGGAATAAAATCGTTGAGCCAAGTTTTCATTTACTATTCCATCACTG 21889 | ||| ||||| |||||||| | | | |||||||| || ||||||||| Sbjct 890151 GTTATTTGCACCTCCTGGCTAAATCGTTCAACAAGATTTTCATTGACAATTCCATCAGAA 890092 Query 21890 GCGGCAAAAAATGCCAATATATTTTTTATAAAATATCGTTCGTTATCTGTTAATTTTTTC 21949 || ||||||||||| |||| || | |||||| | | || | ||||| | ||| Sbjct 890091 GCAGCAAAAAATGCTAATACATGTGATATAAATTTTTTCTCACTGATAGTTAAACTGTTC 890032 Query 21950 CAATCTAATAAATC 21963 || || |||||||| Sbjct 890031 CAGTCAAATAAATC 890018 Score = 86.0 bits (94), Expect = 7e-12 Identities = 139/195 (71%), Gaps = 10/195 (5%) Strand=Plus/Minus Query 21495 AACCTTCATCCCTACTTATTAATTCATTAGAAAATGTTAAACCGGGCATTAATCCTCTCT 21554 ||||| |||| ||| || | ||||||| ||||| | || ||||| | |||||||| Sbjct 890560 AACCT-CATCTCTAGAAATGAGTTCATTACTGAATGTAAGGCCTGGCATAAGTCCTCTCT 890502 Query 21555 TTTTTAACCAAAATATTGACGCAAATGCTCCTGAAAAGAAAATGCCCTCAACGGCAGCAA 21614 | ||||||||||| || | ||||| || ||||||||| || || || ||||||| Sbjct 890501 TCTTTAACCAAAAAATGGCAGCAAAACTACCACTAAAGAAAATACCTTCCACTGCAGCAA 890442 Query 21615 ATGCAACTAATCGTTC----ACCGTATGTAGATTCTTTATCCAATATCCATTTTTCTGCC 21670 |||||| || ||||| | ||| | || ||| | || |||||| ||| |||| Sbjct 890441 ATGCAATTACACGTTCGGGAAAGGTA-GCAGTTTCATGAT---TTATCCAATTTAATGCC 890386 Query 21671 CATTTTGCCTTTTCT 21685 || || | ||||||| Sbjct 890385 CAATTAG-CTTTTCT 890372 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 531717520281840