Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Habropoda_20laboriosa_20[refseq_20GCF_5F001263275.1_202015-08-13]
27,566 sequences; 296,954,667 total letters
Query= NC_006998.1
Length=194711
Score E
Sequences producing significant alignments: (Bits) Value
seq59 161 1e-34
seq284 107 2e-18
>seq59
Length=4191719
Score = 161 bits (178), Expect = 1e-34
Identities = 202/275 (73%), Gaps = 4/275 (1%)
Strand=Plus/Minus
Query 62243 CTGAATGGATCCACCATCTGCCATAATCCTATTCTTGATCTCATCATTCCATAATTTTCT 62302
|||||| || || || ||| ||||| ||| || || || | || ||| | | |||
Sbjct 764808 CTGAATAGAACCGTTATTTGCTATAATTTCATTTTTCATGTCCTGATCCCAAAGATCTCT 764749
Query 62303 CTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAAATTCTCCAGACAATACTCT 62362
|| || | | | | | | ||| |||||||| |||||||| ||||||||||| |||||
Sbjct 764748 TTCAGTAAGATCCCGTAACAAATGAGGATTAACAACTTGAAACTCTCCAGACAAAACTCT 764689
Query 62363 CCGAGTGTAAATATTACTGGTATACGGTTCCACCGACTCATTATTTCCCAAAATTTGAGC 62422
| || ||||||||| | ||||| ||||| | |||||||||||||| |||||||| ||
Sbjct 764688 TCTTGTATAAATATTATTAGTATAGGGTTCTATGGACTCATTATTTCCTAAAATTTGCGC 764629
Query 62423 AGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTAAGACCGTATGTTCTG-- 62480
||| ||||| || ||||||||||| | || ||| |||||||| || ||||| |
Sbjct 764628 AGTAGATGCTGTTGGCATAGGTGCAATTAACAAAGAATTTCTAACTCC--ATGTTTAGCA 764571
Query 62481 ATTTTATCTTTTAGAGGTTCCCAATTCCAAAGATC 62515
||||| || |||| || |||||| ||| | |||
Sbjct 764570 ATTTTTTCCTTTAAAGCAGCCCAATCCCATAAATC 764536
Score = 100 bits (110), Expect = 4e-16
Identities = 198/289 (69%), Gaps = 18/289 (6%)
Strand=Plus/Minus
Query 62772 GCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTTC---TGACAATT 62828
|||||||||| ||||||||||| | ||| |||||||||| | ||| ||||||||
Sbjct 764153 GCTTCTGGAACTGGATAATAATTGACATCAATAATTTTATCCAAATTATAGGTGACAATT 764094
Query 62829 ACTTTGACCACATCCTTC--AGTTTGAGAAAATCAAATCGCCCATCTA-------TTACA 62879
|| ||| | ||| ||||| ||||||||| || || |||||
Sbjct 764093 ---TTCGTCACCT--TTCGAAGTTTTTCAAAATCAAAAGTTTTAT-TAGCAGGATTTACA 764040
Query 62880 AACATGTTCAAGGCAACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATAT 62939
||||| |||| |||| || |||| ||| || || || | |||| | | | ||
Sbjct 764039 AACATATTCACAGCAATTGAAGCCAAATTGCATACAGCAATTTCATCTGGACTGGAGTAC 763980
Query 62940 TGTATTATCTCAGTGCAAAGATTACTACACTTGATAGTTCCTAAATTTTGTTGATTACTC 62999
|||| || || ||||| | ||| ||||||||||| ||||||| |||||| |||||
Sbjct 763979 TGTACAATTTCTGTGCATAAATTGCTACACTTGATTGTTCCTATATTTTGATGATTTGAT 763920
Query 63000 TTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAA 63048
|| || || ||| |||||||| ||| | ||||| || |||||||
Sbjct 763919 TTACGATTGCAGTGATCTTTATAAAGCATGTAAGGAGTTCCTGTTTCAA 763871
Score = 96.9 bits (106), Expect = 4e-15
Identities = 119/159 (75%), Gaps = 3/159 (2%)
Strand=Plus/Minus
Query 63137 TTCGAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACATCAACGA 63196
||| || || || |||||||||| || || |||||| |||| | || ||||| || |
Sbjct 763504 TTCAAATTCATCACCCCAAACATCATCTAAACCAGGAGATTCGTGTGGGCACATTAAAGT 763445
Query 63197 CCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATA-A 63255
||| || | ||| |||||||||||||| |||||||||||||| | ||| ||| |
Sbjct 763444 CCAAATACCATTTTCCAAAACTCGTTTCATAAAAAGATCAGGAATCCATAAAGC-ATAGA 763386
Query 63256 ATAGATCTCTGGTTCTATGTTCCTCGTTTCCTG-TATTC 63293
||| ||||| | ||||| ||| || || |||| |||||
Sbjct 763385 ATAATTCTCTTGCTCTATTTTCTTCTTTACCTGTTATTC 763347
Score = 95.1 bits (104), Expect = 2e-14
Identities = 172/250 (69%), Gaps = 4/250 (2%)
Strand=Plus/Minus
Query 63591 CTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAAC 63650
||||||||||| || | |||| | ||| ||| | || || ||||| || |||||
Sbjct 762895 CTAGACATTTGCTGTTGCTTAGTACATGCAGCAAAAAGAGTTGGTGAAGCATGTGTAAAA 762836
Query 63651 CATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATATCCCATTGATGAATT 63710
| ||| || | | ||| || || || |||||| ||| ||||| ||| ||
Sbjct 762835 TAACGTTCTGATAAGAAATTATATGTTTCTATAGCTCTGTCAATATCATCACCATGGATA 762776
Query 63711 CCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTC 63770
| ||||| || | ||||||||||||||| || || ||||| | || | ||| ||
Sbjct 762775 GCAACTGCAACTCTCATTAACATGTGCTGTGGCCTCTCAACAACTTTTCCATATATCTTT 762716
Query 63771 AACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA--TGAAAAGTCTCGTT 63828
|| || ||| | |||| | ||||| ||||||||||| ||||| ||||| |||| |
Sbjct 762715 AATAAATAGCTTCTTTCAAGTGTTTTGAAACCAAAATAATTGTAACTGAAA--TCTCTAT 762658
Query 63829 CGTAAATAAT 63838
| ||||| ||
Sbjct 762657 CATAAATTAT 762648
>seq284
Length=1419496
Score = 107 bits (118), Expect = 2e-18
Identities = 161/229 (70%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 33100 TTATAAAtttttttAAATCCCAATTCAGAAATCAATCTATCCGCGACGAATTCTATATAT 33159
||| ||| |||| | || ||||| || |||||| ||||| || ||||| ||||||
Sbjct 890887 TTACAAACCTTTTGGCAACCTAATTCTACAAGCAATCTGTCCGCAACAAATTCAATATAT 890828
Query 33160 GTTTTCATCATTTCACAATTCATTCCTATAAGTTTAACTGGAAGAGCCGCAGTAAGAAAT 33219
||| | || ||| ||||| ||||| | || ||| || | ||| |||| | ||||
Sbjct 890827 TGGCACATGAGTTTACAGTTCATGCCTATCATTTCAACGGGTAAAGCGTCAGTTAAAAAT 890768
Query 33220 TCTTGTTCAATGGATACCGCATCTGTTATAATAGATCTAACGGTTTCTTCACTCGGTGGA 33279
||||||||||| ||||| ||| | ||||| ||| | ||| ||| | |||
Sbjct 890767 TCTTGTTCAATTTGGACCGCGTCTTTAATAATTGATGTGACGCGTTCATTCGAAGGTTTC 890708
Query 33280 TGCAATAAATGTTTAAACATCAAACATGCGAAATCGCAGTGCAGACCCT 33328
|| | | ||||||||||| || ||||| |||||||| |||| ||||
Sbjct 890707 TGTATGATGTGTTTAAACATTAAGCATGCAAAATCGCAATGCAATCCCT 890659
Score = 100 bits (110), Expect = 4e-16
Identities = 87/108 (81%), Gaps = 0/108 (0%)
Strand=Plus/Minus
Query 33790 TTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATGTTC 33849
||||| | |||||||| |||||||||||||| || || ||||| ||||| ||||| | |
Sbjct 889928 TTAGAAAGGTCTACTTCCTCCACTGTCCAAAAGGAGGCTTCTGCTTTTTTGTACATTTGC 889869
Query 33850 CAGATGTCATAATATTGGATTGGGAAAATAACAAATCTATTTGGATTT 33897
|| |||||| ||||||| || |||| |||||||||| |||||||
Sbjct 889868 CAAATGTCAGGCCATTGGATAGGAAAAACAACAAATCTACGTGGATTT 889821
Score = 86.0 bits (94), Expect = 8e-12
Identities = 103/138 (75%), Gaps = 3/138 (2%)
Strand=Plus/Minus
Query 32958 TTAAAAGTCAACATCTAAAGAAAAATGATTATCT-TCTTGA--GACATAACTCCCATTTT 33014
|||||||||| ||| | | ||||| | ||| | ||| | ||| |||||| |||
Sbjct 891104 TTAAAAGTCAGCATTAACTGTAAAATTGCTCTCTATTTTGTTTGCCATCACTCCCCATTT 891045
Query 33015 TTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATGATATATTTTC 33074
||| ||||| || || ||| |||||||| || || || |||||||| || |||| |||
Sbjct 891044 TTGATATTCTCCAACTTTTTTCTCGAAAAAGTTCGTCTTACCTTCCAAAGAAATATGTTC 890985
Query 33075 CATGAAATCAAACGGATT 33092
||||||||| || |||||
Sbjct 890984 CATGAAATCGAATGGATT 890967
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 622732547968560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |