Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Habropoda_20laboriosa_20[refseq_20GCF_5F001263275.1_202015-08-13] 27,566 sequences; 296,954,667 total letters Query= NC_007151.1 Length=149622 Score E Sequences producing significant alignments: (Bits) Value seq49 107 2e-18 seq68 82.4 7e-11 seq65 82.4 7e-11 >seq49 Length=1886280 Score = 107 bits (118), Expect = 2e-18 Identities = 164/231 (71%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 26768 AATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAA 26827 ||||||| | || || ||||| | ||||||||| | || || | ||| | ||| | Sbjct 1161556 AATGCAAATTTTCGTCAAAACCCTTACTGGAAAAACTATTACTTTAGAAGTTGAAGCTTC 1161497 Query 26828 CGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCA 26887 || || || ||| | || || ||| ||| ||||| || || || || || || || Sbjct 1161496 TGATACGATTGAGAATGTGAAGGCAAAAATTCAGGACAAGGAGGGCATTCCACCAGACCA 1161437 Query 26888 ACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAA-ACGTCAGCGACTATA 26946 ||||||| | |||| || || || ||||| ||||||| | | || | | ||||||| Sbjct 1161436 ACAAAGATTGATTTTCGCTGGTAAGCAACTTGAAGATGGACGCACACTTTCG-GACTATA 1161378 Query 26947 ACATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGGAA 26997 |||||||||| || || ||| | ||||| || ||| |||| ||||||||| Sbjct 1161377 ACATTCAAAAGGAGTCAACTCTTCATCTCGTTCTGCGACTCCGAGGAGGAA 1161327 Score = 107 bits (118), Expect = 2e-18 Identities = 161/229 (70%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 ||||| | ||||| || ||||| ||||| ||| | || ||| |||| | ||| || | Sbjct 1163141 ATGCAGATCTTTGTCAAGACATTGACTGGCAAAACAATAACCCTCGAGGTTGAAGCATCC 1163082 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 || || || || | || || ||| ||| ||||| || || || || || ||||| Sbjct 1163081 GATACAATTGAAAATGTGAAGGCAAAAATTCAGGACAAGGAGGGAATTCCCCCAGATCAG 1163022 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 |||||| | |||| | ||||||||||| ||||||| |||| || || || ||| Sbjct 1163021 CAAAGATTGATTTTTGCTGGCAAACAACTTGAAGATGGAAGAACACTCTCTGATTACAAC 1162962 Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGGAA 26997 ||||||||||| || || | || || || || || | ||||| |||| Sbjct 1162961 ATTCAAAAAGAGTCAACACTTCACCTTGTACTTCGATTGAGAGGTGGAA 1162913 Score = 95.1 bits (104), Expect = 1e-14 Identities = 159/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 26768 AATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAA 26827 ||||||| | || || || || | || ||||| ||||||| | ||| | ||| | Sbjct 1162914 AATGCAAATTTTCGTCAAGACCCTTACGGGAAAGACGATCACTTTAGAAGTTGAAGCTTC 1162855 Query 26828 CGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCA 26887 || |||||||| | || ||| ||| ||| || || || || || || || || || Sbjct 1162854 AGATACCATCGAAAATGTTAAAGCAAAAATTCAAGATAAGGAGGGTATTCCACCAGACCA 1162795 Query 26888 ACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAA 26947 ||| ||| | |||| || || || ||||| ||||||| | | || || || || Sbjct 1162794 ACAGAGATTGATTTTCGCTGGTAAGCAACTTGAAGATGGACGCACACTCTCTGATTACAA 1162735 Query 26948 CATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGGAA 26997 |||||||||||||| ||| ||||||| || || |||| |||| |||| Sbjct 1162734 TATTCAAAAAGAATCAACTCTCCATCTTGTACTTCGACTCCGAGGTGGAA 1162685 Score = 91.5 bits (100), Expect = 1e-13 Identities = 158/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 26768 AATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAA 26827 ||||||| | || || ||||| | || ||||| ||||||| | ||| | ||| | Sbjct 1162686 AATGCAAATTTTCGTTAAAACTCTCACGGGAAAGACGATCACTTTAGAAGTTGAAGCTTC 1162627 Query 26828 CGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCA 26887 || || || ||| | || ||| ||| || || || || || || || || || || Sbjct 1162626 TGATACAATTGAGAATGTTAAAGCAAAAATCCAAGATAAGGAGGGTATTCCACCAGACCA 1162567 Query 26888 ACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAA 26947 ||| ||| | || | || || || ||||| ||||||| | | || |||||||| Sbjct 1162566 ACAGAGATTGATCTTCGCTGGTAAGCAACTTGAAGATGGACGCACACTCTCTGACTATAA 1162507 Query 26948 CATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGGAA 26997 |||||| |||||||| || | ||||| || || ||||| |||| |||| Sbjct 1162506 CATTCAGAAAGAATCAACCCTTCATCTTGTACTTCGACTTCGAGGTGGAA 1162457 >seq68 Length=1848670 Score = 82.4 bits (90), Expect = 7e-11 Identities = 137/196 (70%), Gaps = 4/196 (2%) Strand=Plus/Minus Query 26765 CAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATC 26824 ||||||||| | || || ||||| || || || ||| | || ||| | ||| | ||| | Sbjct 813115 CAAAATGCAGATATTCGTGAAAACTTTGACGGGTAAAACCATTACCCTTGAAGTGGAAGC 813056 Query 26825 AAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGA 26884 | || || || || | || ||| ||| ||| || |||||||| || || ||||| Sbjct 813055 ATCGGATACTATTGAAAATGTGAAAGCAAAAATTCAGGATAAAGAAGGAATTCCACCCGA 812996 Query 26885 TCAACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAAC--GTCAGCGAC 26942 ||| ||| | ||||||| | || ||||| | ||||||| | | ||||| | Sbjct 812995 TCAGCAACGTCTCATTTTTGCTGGAAAACAGTTAGAAGATGGACGTACTCTGTCAG--AT 812938 Query 26943 TATAACATTCAAAAAG 26958 |||||||||||||||| Sbjct 812937 TATAACATTCAAAAAG 812922 >seq65 Length=771584 Score = 82.4 bits (90), Expect = 7e-11 Identities = 156/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 26768 AATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAA 26827 |||||| | ||||| || || | || || ||| | |||||| | || ||||| | Sbjct 537581 AATGCAGATCTTTGTCAAGACGCTCACAGGGAAAACCATCACCTTGGAGGTAGAAGCCTC 537640 Query 26828 CGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCA 26887 ||||| || ||| | || || |||||| ||||||||||| || |||||||| || Sbjct 537641 AGACACAATAGAGAACGTTAAGGCCAAGATTCAAGACAAAGAAGGAATCCCTCCCGACCA 537700 Query 26888 ACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAA 26947 || | | || | | |||||||| | ||||||| | | | || ||||| Sbjct 537701 GCAGCGTTTGATCTTTGCTGGCAAACAGTTAGAAGATGGGCGCACTCTTTCAGATTATAA 537760 Query 26948 CATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGGAA 26997 ||| ||||| ||||| || | ||| |||| || |||| ||||||||| Sbjct 537761 CATCCAAAAGGAATCCACCCTGCATTTGGTGTTGCGACTCCGAGGAGGAA 537810 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478497464903520