Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Habropoda_20laboriosa_20[refseq_20GCF_5F001263275.1_202015-08-13] 27,566 sequences; 296,954,667 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq151 100 7e-16 seq146 86.0 2e-11 >seq151 Length=1873176 Score = 100 bits (110), Expect = 7e-16 Identities = 169/241 (70%), Gaps = 4/241 (2%) Strand=Plus/Minus Query 111315 TTTCCACTTCTCACAACAAAGCGAACATATTGGAAGGGAATTGTCGAAGAACTTCTGTGG 111374 |||||| | || || ||||| ||| ||| |||||||| | | || ||| | | ||| Sbjct 1666018 TTTCCATTACTAACTACAAAACGAGTATACTGGAAGGGTGTACTGGAGGAATTGTTATGG 1665959 Query 111375 TTTATTCGCGGAAGTACAAATGCAAATGAACTTGCAGCAAAAAATGTAAAAATTTGGGAT 111434 || || ||| |||||||| || | | | |||| ||| | ||||||||| Sbjct 1665958 TTCATCAAAGGATCAACAAATGCTAAGTTATTAAGTGAAAAAGGTGTTCATATTTGGGAT 1665899 Query 111435 GGAAATGGATCACGTGACTTTCTAGATTCAGTTGGT-CTTGTC-GACAACGAAGAAGGTG 111492 | ||| | |||||| ||| |||| || ||| ||| | |||| |||||||| | Sbjct 1665898 GCAAACAGTTCACGTAACTACTTAGACTC--TTGTAACTTTACAGACAGGGAAGAAGGAG 1665841 Query 111493 ATCTCGGACCAGTTTACGGATTTCAATGGCGCCACTTTGGTGCAGACTACAAAACCATGC 111552 || | ||||||||||| || ||||| ||| | || ||||||||||| |||||| ||||| Sbjct 1665840 ATTTGGGACCAGTTTATGGGTTTCAGTGGAGACATTTTGGTGCAGAATACAAAGACATGC 1665781 Query 111553 A 111553 | Sbjct 1665780 A 1665780 >seq146 Length=9480515 Score = 86.0 bits (94), Expect = 2e-11 Identities = 91/120 (76%), Gaps = 0/120 (0%) Strand=Plus/Plus Query 13071 TTCATTTCGTTTATCAAGCTCTTTCTTTTTCAAAACAGGTGGCTTTCCGTCAAAAACATA 13130 |||| ||||||| | | ||| |||||||| ||||| ||||| ||||||||||| Sbjct 6111111 TTCAGCTCGTTTAGCTAACTCACCACTTTTCAAATTTGGTGGTTTTCCATCAAAAACATA 6111170 Query 13131 GACGGGTTTAATTCCTGCTTCAATTAATCGAATGGTTCGGTAAAAAATACCTGTTAAATG 13190 || ||||| |||||| ||| | ||| || || ||||| ||||| ||||| ||||||| Sbjct 6111171 CACAGGTTTTATTCCTTGTTCTACTAAACGTATTGTTCGATAAAATATACCCATTAAATG 6111230 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1302893269356612