Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Habropoda_20laboriosa_20[refseq_20GCF_5F001263275.1_202015-08-13] 27,566 sequences; 296,954,667 total letters Query= NC_007383.1 Length=134394 Score E Sequences producing significant alignments: (Bits) Value seq49 114 1e-20 seq65 89.7 4e-13 seq394 84.2 2e-11 seq68 82.4 7e-11 >seq49 Length=1886280 Score = 114 bits (126), Expect = 1e-20 Identities = 174/245 (71%), Gaps = 2/245 (1%) Strand=Plus/Minus Query 23975 TTTTTAGCCAAACAAA-ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCA 24033 |||||| ||| | || ||||| | ||||| || ||||| ||||| ||| | || ||| Sbjct 1163157 TTTTTA-CCAGATAATCATGCAGATCTTTGTCAAGACATTGACTGGCAAAACAATAACCC 1163099 Query 24034 TCGAAGTCGAGGCCAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAG 24093 |||| || || || ||| || || || | || || ||| ||| ||||| || | Sbjct 1163098 TCGAGGTTGAAGCATCCGATACAATTGAAAATGTGAAGGCAAAAATTCAGGACAAGGAGG 1163039 Query 24094 GCATACCTCCCGATCAACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAA 24153 | || || || ||||| || ||| |||||| | ||||| ||||| ||||||| |||| Sbjct 1163038 GAATTCCCCCAGATCAGCAAAGATTGATTTTTGCTGGCAAACAACTTGAAGATGGAAGAA 1162979 Query 24154 ACGTCAGCGATTATAACATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAG 24213 || ||||| |||||||||||||| || ||| |||| | || | ||||||||| Sbjct 1162978 CACTCTCTGATTACAACATTCAAAAAGAGTCAACACTTCACCTTGTACTTCGATTGAGAG 1162919 Query 24214 GAGGA 24218 | ||| Sbjct 1162918 GTGGA 1162914 Score = 105 bits (116), Expect = 6e-18 Identities = 163/230 (71%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 23990 AATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAA 24049 ||||||| | || || ||||| | ||||||||| | ||||| | ||||| || || Sbjct 1161556 AATGCAAATTTTCGTCAAAACCCTTACTGGAAAAACTATTACTTTAGAAGTTGAAGCTTC 1161497 Query 24050 CGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCA 24109 || || || ||| | || || ||| ||| ||||| || ||||| || || || || Sbjct 1161496 TGATACGATTGAGAATGTGAAGGCAAAAATTCAGGACAAGGAGGGCATTCCACCAGACCA 1161437 Query 24110 ACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATG-ACAGAAACGTCAGCGATTATA 24168 ||| ||| |||||| || || |||||||| ||||||| || | || | | || |||| Sbjct 1161436 ACAAAGATTGATTTTCGCTGGTAAGCAACTTGAAGATGGACGCACACTTTCG-GACTATA 1161378 Query 24169 ACATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGGA 24218 |||||||||| || || || ||||| | || | || | |||||||| Sbjct 1161377 ACATTCAAAAGGAGTCAACTCTTCATCTCGTTCTGCGACTCCGAGGAGGA 1161328 Score = 95.1 bits (104), Expect = 1e-14 Identities = 142/199 (71%), Gaps = 2/199 (1%) Strand=Plus/Minus Query 23990 AATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAA 24049 ||||||| | || || || || | || ||||| |||| || | ||||| || || Sbjct 1162914 AATGCAAATTTTCGTCAAGACCCTTACGGGAAAGACGATCACTTTAGAAGTTGAAGCTTC 1162855 Query 24050 CGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCA 24109 || |||||||| | || ||| ||| ||| || || || || || || || || || Sbjct 1162854 AGATACCATCGAAAATGTTAAAGCAAAAATTCAAGATAAGGAGGGTATTCCACCAGACCA 1162795 Query 24110 ACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATG-ACAGAAACGTCAGCGATTATA 24168 ||||||| |||||| || || |||||||| ||||||| || | || || ||||| | Sbjct 1162794 ACAGAGATTGATTTTCGCTGGTAAGCAACTTGAAGATGGACGCACAC-TCTCTGATTACA 1162736 Query 24169 ACATTCAAAAAGAATCTAC 24187 | |||||||||||||| || Sbjct 1162735 ATATTCAAAAAGAATCAAC 1162717 Score = 89.7 bits (98), Expect = 4e-13 Identities = 142/200 (71%), Gaps = 4/200 (2%) Strand=Plus/Minus Query 23990 AATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAA 24049 ||||||| | || || ||||| | || |||||| | ||||| | ||||| || || Sbjct 1162458 AATGCAAATTTTCGTCAAAACCCTTACGGGAAAAACTATTACTTTAGAAGTTGAAGCTTC 1162399 Query 24050 CGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCA 24109 || || || ||| | || || ||| ||| ||||| ||||| || || || ||||| Sbjct 1162398 TGATACGATTGAGAATGTGAAGGCAAAAATTCAGGACAAGGAAGGTATTCCACCTGATCA 1162339 Query 24110 ACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGA-TGACAGAAACGT-CAGCGATTAT 24167 ||||||| |||||| || || ||||| || ||||| ||| | || | || || ||| Sbjct 1162338 ACAGAGATTGATTTTCGCTGGAAAGCAGCTTGAAGACGGACGCACACTTGCA--GACTAT 1162281 Query 24168 AACATTCAAAAAGAATCTAC 24187 || ||||| || ||||| || Sbjct 1162280 AATATTCAGAAGGAATCAAC 1162261 Score = 89.7 bits (98), Expect = 4e-13 Identities = 145/206 (70%), Gaps = 2/206 (1%) Strand=Plus/Minus Query 23990 AATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAA 24049 ||||||| | || || ||||| | || ||||| |||| || | ||||| || || Sbjct 1162686 AATGCAAATTTTCGTTAAAACTCTCACGGGAAAGACGATCACTTTAGAAGTTGAAGCTTC 1162627 Query 24050 CGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCA 24109 || || || ||| | || ||| ||| || || || || || || || || || || Sbjct 1162626 TGATACAATTGAGAATGTTAAAGCAAAAATCCAAGATAAGGAGGGTATTCCACCAGACCA 1162567 Query 24110 ACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATG-ACAGAAACGTCAGCGATTATA 24168 ||||||| |||| | || || |||||||| ||||||| || | || || || |||| Sbjct 1162566 ACAGAGATTGATCTTCGCTGGTAAGCAACTTGAAGATGGACGCACAC-TCTCTGACTATA 1162508 Query 24169 ACATTCAAAAAGAATCTACAATTCAT 24194 ||||||| |||||||| || ||||| Sbjct 1162507 ACATTCAGAAAGAATCAACCCTTCAT 1162482 Score = 84.2 bits (92), Expect = 2e-11 Identities = 145/207 (70%), Gaps = 4/207 (2%) Strand=Plus/Minus Query 23990 AATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAA 24049 ||||||| | || || ||||| | || ||||| | || || | ||||| || || Sbjct 1162230 AATGCAAATTTTCGTTAAAACTCTCACGGGAAAGACAATCACTTTAGAAGTTGAAGCTTC 1162171 Query 24050 CGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCA 24109 || || || ||| | || || ||| ||| ||||| ||||| || || || ||||| Sbjct 1162170 TGATACAATTGAGAATGTGAAGGCAAAAATTCAGGACAAGGAAGGTATTCCACCTGATCA 1162111 Query 24110 ACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGA-TGACAGAAACGT-CAGCGATTAT 24167 ||||||| |||||| || || ||||| || ||||| ||| | || | || || ||| Sbjct 1162110 ACAGAGATTGATTTTCGCTGGTAAGCAGCTTGAAGACGGACGCACACTTGCA--GACTAT 1162053 Query 24168 AACATTCAAAAAGAATCTACAATTCAT 24194 || ||||| || ||||| || ||||| Sbjct 1162052 AATATTCAGAAGGAATCAACTCTTCAT 1162026 >seq65 Length=771584 Score = 89.7 bits (98), Expect = 4e-13 Identities = 157/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 23990 AATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAA 24049 |||||| | ||||| || || | || || ||| | || ||| | || || || ||| Sbjct 537581 AATGCAGATCTTTGTCAAGACGCTCACAGGGAAAACCATCACCTTGGAGGTAGAAGCCTC 537640 Query 24050 CGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCA 24109 ||||| || ||| | || || |||||| ||||||||||| || |||||||| || Sbjct 537641 AGACACAATAGAGAACGTTAAGGCCAAGATTCAAGACAAAGAAGGAATCCCTCCCGACCA 537700 Query 24110 ACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAA 24169 ||| | |||| | | ||||| || | ||||||| | | | |||||||| Sbjct 537701 GCAGCGTTTGATCTTTGCTGGCAAACAGTTAGAAGATGGGCGCACTCTTTCAGATTATAA 537760 Query 24170 CATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGGA 24218 ||| ||||| ||||| || | ||||| ||||| || | |||||||| Sbjct 537761 CATCCAAAAGGAATCCACCCTGCATTTGGTGTTGCGACTCCGAGGAGGA 537809 Score = 89.7 bits (98), Expect = 4e-13 Identities = 151/215 (70%), Gaps = 4/215 (2%) Strand=Plus/Plus Query 23990 AATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAA 24049 |||||| | ||||| ||||| | || || ||| | || ||| | || || ||||| Sbjct 537809 AATGCAGATCTTTGTCAAAACGCTCACGGGGAAAACCATCACCCTGGACGTTGAGGCTTC 537868 Query 24050 CGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCA 24109 ||||| || ||| | || || |||||| ||||||||||| || |||||||| || Sbjct 537869 AGACACAATAGAGAACGTTAAGGCCAAGATTCAAGACAAAGAAGGAATCCCTCCCGACCA 537928 Query 24110 ACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGAT-GACAGAAAC-GTCAGCGATTAT 24167 ||| | |||| | | ||||| || | |||||| | | | || ||| |||||| Sbjct 537929 GCAGCGTTTGATCTTTGCTGGCAAACAGTTGGAAGATGGGCGCACACTTTCA--GATTAT 537986 Query 24168 AACATTCAAAAAGAATCTACAATTCATTTAGTGTT 24202 ||||| ||||| || || ||| | || |||||||| Sbjct 537987 AACATCCAAAAGGAGTCCACACTGCACTTAGTGTT 538021 Score = 84.2 bits (92), Expect = 2e-11 Identities = 156/229 (68%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 23990 AATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAA 24049 |||||| | || || || || | || || ||| | || || ||||||| ||||| Sbjct 537125 AATGCAGATCTTCGTTAAGACGCTGACGGGGAAAACCATCACACTCGAAGTTGAGGCTTC 537184 Query 24050 CGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCA 24109 ||||| || || | || || |||||| ||||||||||| || |||||||| || Sbjct 537185 AGACACAATAGAAAACGTTAAGGCCAAGATTCAAGACAAAGAAGGTATCCCTCCCGACCA 537244 Query 24110 ACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAA 24169 ||| | |||| | | ||||| ||| | ||||||| | | | | ||||| || Sbjct 537245 GCAGCGTTTGATCTTTGCTGGCAAACAATTGGAAGATGGGCGCACCCTTTCAGATTACAA 537304 Query 24170 CATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGGA 24218 || |||||||| || ||| | || || ||||| || | |||||||| Sbjct 537305 TATCCAAAAAGAGTCCACACTGCACTTGGTGTTGCGACTCCGAGGAGGA 537353 Score = 84.2 bits (92), Expect = 2e-11 Identities = 156/229 (68%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 23990 AATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAA 24049 |||||| | ||||| || || | || || ||| | || ||| | ||||| ||||| Sbjct 538721 AATGCAGATCTTTGTCAAGACGCTGACGGGGAAAACCATCACCCTGGAAGTTGAGGCTTC 538780 Query 24050 CGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCA 24109 ||||| || ||| | || ||| |||||| ||||||||||| || ||||| || || Sbjct 538781 AGACACAATAGAGAACGTTAAAGCCAAGATTCAAGACAAAGAAGGAATCCCTCCTGACCA 538840 Query 24110 ACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAA 24169 ||| | |||| | | || || || || ||||||| | | | ||||| || Sbjct 538841 GCAGCGTTTGATCTTTGCTGGTAAACAGCTGGAAGATGGTCGCACTCTTTCAGATTACAA 538900 Query 24170 CATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGGA 24218 ||| || ||||| || ||| | || || ||||| || | |||||||| Sbjct 538901 CATCCAGAAAGAGTCGACACTGCACTTGGTGTTGCGACTCCGAGGAGGA 538949 Score = 82.4 bits (90), Expect = 7e-11 Identities = 159/231 (69%), Gaps = 4/231 (2%) Strand=Plus/Plus Query 23990 AATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAA 24049 |||||| | || || || || | || || ||| | || || ||||||| ||||| Sbjct 536669 AATGCAGATCTTCGTCAAGACGCTCACAGGGAAAACCATCACACTCGAAGTTGAGGCTTC 536728 Query 24050 CGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCA 24109 ||||| || || | || || |||||| ||||||||||| || |||||||| || Sbjct 536729 AGACACAATAGAAAACGTTAAGGCCAAGATTCAAGACAAAGAAGGAATCCCTCCCGACCA 536788 Query 24110 ACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGAT-GACAGAAAC-GTCAGCGATTAT 24167 ||| | |||| | | ||||| ||| | |||||| | | | || ||| ||||| Sbjct 536789 GCAGCGTTTGATCTTTGCTGGCAAACAATTGGAAGATGGGCGCACACTTTCA--GATTAC 536846 Query 24168 AACATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGGA 24218 || || |||||||| || ||| | || || ||||| || | |||||||| Sbjct 536847 AATATCCAAAAAGAGTCCACACTGCACTTGGTGTTGCGACTCCGAGGAGGA 536897 >seq394 Length=4544675 Score = 84.2 bits (92), Expect = 2e-11 Identities = 97/128 (76%), Gaps = 2/128 (2%) Strand=Plus/Plus Query 24092 AGGCATACCTCCCGATCAACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAG 24151 |||||| || || ||||| |||||| | || | | ||||| ||| | ||||||| || Sbjct 4399682 AGGCATTCCACCTGATCAGCAGAGATTAATCTTTGCTGGCAAACAATTAGAAGATGGTAG 4399741 Query 24152 AAACGTCAGC-GATTATAACATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGA 24210 || | | | | |||||||||||||| || ||||||||| | ||||| || ||| | || | Sbjct 4399742 AA-CTTTATCAGATTATAACATTCAGAAGGAATCTACATTACATTTGGTATTACGTTTAA 4399800 Query 24211 GAGGAGGA 24218 |||| ||| Sbjct 4399801 GAGGTGGA 4399808 >seq68 Length=1848670 Score = 82.4 bits (90), Expect = 7e-11 Identities = 138/196 (70%), Gaps = 4/196 (2%) Strand=Plus/Minus Query 23987 CAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGC 24046 ||||||||| | || || ||||| || || || ||| | |||||| | ||||| || || Sbjct 813115 CAAAATGCAGATATTCGTGAAAACTTTGACGGGTAAAACCATTACCCTTGAAGTGGAAGC 813056 Query 24047 CAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGA 24106 || || || || | || ||| ||| ||| || |||||||| || || ||||| Sbjct 813055 ATCGGATACTATTGAAAATGTGAAAGCAAAAATTCAGGATAAAGAAGGAATTCCACCCGA 812996 Query 24107 TCAACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATG-ACAGAAAC-GTCAGCGAT 24164 ||| || | || |||| | || || || | ||||||| || | | ||||| || Sbjct 812995 TCAGCAACGTCTCATTTTTGCTGGAAAACAGTTAGAAGATGGACGTACTCTGTCAG--AT 812938 Query 24165 TATAACATTCAAAAAG 24180 |||||||||||||||| Sbjct 812937 TATAACATTCAAAAAG 812922 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429791558432730