Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Habropoda_20laboriosa_20[refseq_20GCF_5F001263275.1_202015-08-13] 27,566 sequences; 296,954,667 total letters Query= NC_008035.3 Length=126629 Score E Sequences producing significant alignments: (Bits) Value seq65 109 4e-19 >seq65 Length=771584 Score = 109 bits (120), Expect = 4e-19 Identities = 161/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 |||||||| || | || |||| ||||| |||||||| ||||| |||||||| || | Sbjct 538492 CCTCCTCGGAGTCGCAACACCAAGTGCAGTGTGGACTCTTTTTGGATGTTGTAATCTGAA 538433 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | || | || ||||| |||||||| ||| | || | ||||| ||||| ||| Sbjct 538432 AGAGTGCGCCCATCTTCCAACTGTTTGCCAGCAAATATCAAACGCTGCTGGTCGGGAGGG 538373 Query 16829 ACGCCCTCTTTGTCGGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTT 16888 | ||||||||||| ||| | ||| || | | | ||||| | ||| | Sbjct 538372 ATTCCCTCTTTGTCTTGAATCTTAGCCTTAACGTTATCTATTGTGTCTGAAGCCTCAACT 538313 Query 16889 TCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCATT 16936 |||| |||||||||||| || || || ||||||||||| ||||||||| Sbjct 538312 TCCAGGGTGATGGTTTTCCCCGTGAGTGTTTTGACAAAGATCTGCATT 538265 Score = 104 bits (114), Expect = 2e-17 Identities = 165/234 (71%), Gaps = 12/234 (5%) Strand=Plus/Minus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 |||||||| || | || |||| ||||| |||||||||||||| |||||||| || | Sbjct 538720 CCTCCTCGGAGTCGCAACACCAAGTGCAGTGTGGACTCCTTTTGGATGTTGTAATCTGAA 538661 Query 16769 ATGGTTTTGGCGTCC----TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCAC 16824 | || |||||| ||||| || || || ||| | || || ||||| ||||| Sbjct 538660 AGAGT----GCGTCCATCTTCCAACTGCTTCCCAGCAAAGATCAGACGCTGCTGGTCAGA 538605 Query 16825 AGGCACGCCCTCTTTGTCGGCAATTT--GCTGCTTCACCTGGCCCACAGTGTCGCCGGGC 16882 ||| | || |||||||| | |||| ||| || || | | | ||||| | | Sbjct 538604 AGGGATTCCTTCTTTGTCTACGATTTTGGCT--TTAACGTTCTCTATTGTGTCTGAAGCC 538547 Query 16883 TCCGTTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCATT 16936 || ||||| |||||||||||| || || ||||| ||||| || ||||||||| Sbjct 538546 TCAACTTCCAGGGTGATGGTTTTCCCCGTGAGCGTCTTGACGAAGATCTGCATT 538493 Score = 100 bits (110), Expect = 2e-16 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 |||||||| || | || |||| ||||| |||||||| ||||| |||||||| || | Sbjct 537580 CCTCCTCGGAGTCGCAACACCAAGTGCAGTGTGGACTCTTTTTGGATGTTGTAATCTGAA 537521 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | || | || ||||| |||||||| ||| | || | ||||| ||||| ||| Sbjct 537520 AGAGTGCGCCCATCTTCCAACTGTTTGCCAGCAAAGATTAAACGCTGCTGGTCGGGAGGG 537461 Query 16829 ACGCCCTCTTTGTCGGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTT 16888 | || |||||||| ||| | ||| || | | | ||||| || || Sbjct 537460 ATTCCTTCTTTGTCTTGAATCTTGGCCTTAACGTTCTCTATTGTGTCTGAGGCTTCTACC 537401 Query 16889 TCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCATT 16936 |||| |||||||||||| || || ||||| |||||||| ||||||||| Sbjct 537400 TCCAAGGTGATGGTTTTCCCTGTGAGCGTCTTGACAAAGATCTGCATT 537353 Score = 98.7 bits (108), Expect = 8e-16 Identities = 166/237 (70%), Gaps = 5/237 (2%) Strand=Plus/Minus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 |||||||| || | || ||||| ||||| |||||||| ||||| || ||||| || | Sbjct 536440 CCTCCTCGGAGTCGCAATACCAAGTGCAGTGTGGACTCTTTTTGGATATTGTAATCTGAA 536381 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | || | || ||||| ||||| || ||| | || | ||||| ||||| ||| Sbjct 536380 AGAGTGCGACCATCTTCCAACTGTTTCCCAGCAAAGATCAAACGCTGCTGGTCGGGAGGG 536321 Query 16829 ACGCCCTCTTTGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCG 16886 | || |||||||| || || || |||||| | | | ||||| || || Sbjct 536320 ATTCCTTCTTTGTCTTGGATCTTGGC--CTTCACATTCTCTATTGTGTCTGAGGCTTCTA 536263 Query 16887 TTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT-TTTGTAG 16942 |||| |||||||||||| || || || |||||||| || |||||||| ||||||| Sbjct 536262 CCTCCAAGGTGATGGTTTTACCTGTGAGGGTTTTGACGAAGATCTGCATATTTGTAG 536206 Score = 96.9 bits (106), Expect = 3e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 |||||||| || | || |||| ||||| |||||||| ||||| || ||||| || | Sbjct 537352 CCTCCTCGGAGTCGCAACACCAAGTGCAGTGTGGACTCTTTTTGGATATTGTAATCTGAA 537293 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | ||| | || |||||||||||||| ||| | || | ||||| ||||| ||| Sbjct 537292 AGGGTGCGCCCATCTTCCAATTGTTTGCCAGCAAAGATCAAACGCTGCTGGTCGGGAGGG 537233 Query 16829 ACGCCCTCTTTGTCGGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTT 16888 | || |||||||| ||| | ||| || | | | ||||| | ||| | Sbjct 537232 ATACCTTCTTTGTCTTGAATCTTGGCCTTAACGTTTTCTATTGTGTCTGAAGCCTCAACT 537173 Query 16889 TCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCATT 16936 || | ||||||||||| || |||||||| || || || ||||||||| Sbjct 537172 TCGAGTGTGATGGTTTTCCCCGTCAGCGTCTTAACGAAGATCTGCATT 537125 Score = 96.9 bits (106), Expect = 3e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 |||||||| || | || |||| |||||| ||||| |||||||| ||||| || || | Sbjct 537808 CCTCCTCGGAGTCGCAACACCAAATGCAGGGTGGATTCCTTTTGGATGTTATAATCTGAA 537749 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | || | || || || |||||||| ||| | || | ||||| ||||| ||| Sbjct 537748 AGAGTGCGCCCATCTTCTAACTGTTTGCCAGCAAAGATCAAACGCTGCTGGTCGGGAGGG 537689 Query 16829 ACGCCCTCTTTGTCGGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTT 16888 | || |||||||| ||| | ||| || | | | ||||| || || Sbjct 537688 ATTCCTTCTTTGTCTTGAATCTTGGCCTTAACGTTCTCTATTGTGTCTGAGGCTTCTACC 537629 Query 16889 TCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCATT 16936 |||| |||||||||||| || || ||||| |||||||| ||||||||| Sbjct 537628 TCCAAGGTGATGGTTTTCCCTGTGAGCGTCTTGACAAAGATCTGCATT 537581 Score = 93.3 bits (102), Expect = 3e-14 Identities = 143/204 (70%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 16733 TGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGT 16792 ||||| |||||||||||||| ||||| || || | | || | || ||||| ||| Sbjct 538012 TGCAGTGTGGACTCCTTTTGGATGTTATAATCTGAAAGTGTGCGCCCATCTTCCAACTGT 537953 Query 16793 TTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCGGCAATTTGC 16852 ||||| ||| | || | ||||| ||||| ||| | || |||||||| ||| | Sbjct 537952 TTGCCAGCAAAGATCAAACGCTGCTGGTCGGGAGGGATTCCTTCTTTGTCTTGAATCTTG 537893 Query 16853 TGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTTTTTCCGGTC 16912 ||| || | | | ||||| | ||| |||| |||||||||||| || || Sbjct 537892 GCCTTAACGTTCTCTATTGTGTCTGAAGCCTCAACGTCCAGGGTGATGGTTTTCCCCGTG 537833 Query 16913 AGCGTTTTGACAAAAATCTGCATT 16936 |||||||||||||| ||||||||| Sbjct 537832 AGCGTTTTGACAAAGATCTGCATT 537809 Score = 91.5 bits (100), Expect = 1e-13 Identities = 157/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 |||||||| || | || |||| ||||| |||||||| ||||| || ||||| || | Sbjct 536896 CCTCCTCGGAGTCGCAACACCAAGTGCAGTGTGGACTCTTTTTGGATATTGTAATCTGAA 536837 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | || | || |||||||||||||| ||| | || | ||||| ||||| ||| Sbjct 536836 AGTGTGCGCCCATCTTCCAATTGTTTGCCAGCAAAGATCAAACGCTGCTGGTCGGGAGGG 536777 Query 16829 ACGCCCTCTTTGTCGGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTT 16888 | || |||||||| ||| | ||| || | | | ||||| | ||| | Sbjct 536776 ATTCCTTCTTTGTCTTGAATCTTGGCCTTAACGTTTTCTATTGTGTCTGAAGCCTCAACT 536717 Query 16889 TCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCATT 16936 || | ||||||||||| || || ||||| ||||| || ||||||||| Sbjct 536716 TCGAGTGTGATGGTTTTCCCTGTGAGCGTCTTGACGAAGATCTGCATT 536669 Score = 91.5 bits (100), Expect = 1e-13 Identities = 164/237 (69%), Gaps = 6/237 (3%) Strand=Plus/Minus Query 16702 CATTTACCCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTA 16761 ||||| |||||||| || | || |||| ||||| || ||||| || || |||||||| Sbjct 538953 CATTT--CCTCCTCGGAGTCGCAACACCAAGTGCAGTGTCGACTCTTTCTGGATGTTGTA 538896 Query 16762 GTCGGCCATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTC 16821 || | | || | || |||| ||||| || ||| | || | ||||| ||||| Sbjct 538895 ATCTGAAAGAGTGCGACCATCTTCCAGCTGTTTACCAGCAAAGATCAAACGCTGCTGGTC 538836 Query 16822 CACAGGCACGCCCTCTTTGTCGGCAATTT--GCTGCTTCACCTGGCCCACAGTGTCGCCG 16879 ||| | || |||||||| ||| | ||| || || | | | ||||| Sbjct 538835 AGGAGGGATTCCTTCTTTGTCTTGAATCTTGGCT--TTAACGTTCTCTATTGTGTCTGAA 538778 Query 16880 GGCTCCGTTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCATT 16936 | ||| ||||| |||||||||||| || |||||||| |||||||| ||||||||| Sbjct 538777 GCCTCAACTTCCAGGGTGATGGTTTTCCCCGTCAGCGTCTTGACAAAGATCTGCATT 538721 Score = 87.8 bits (96), Expect = 1e-12 Identities = 156/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 |||||||| || | || |||| ||||| |||||||||||||| || ||||| || | Sbjct 537124 CCTCCTCGGAGTCGCAACACCAAGTGCAGGGTGGACTCCTTTTGGATATTGTAATCTGAA 537065 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | || | || ||||| ||||| || ||| | || | ||||| ||||| ||| Sbjct 537064 AGTGTGCGCCCATCTTCCAACTGTTTACCAGCAAAGATCAAACGCTGCTGGTCGGGAGGG 537005 Query 16829 ACGCCCTCTTTGTCGGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTT 16888 | || |||||||| ||| | ||| || | | | ||||| | ||| | Sbjct 537004 ATTCCTTCTTTGTCTTGAATCTTGGCCTTAACGTTCTCTATTGTGTCTGAAGCCTCAACT 536945 Query 16889 TCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCATT 16936 || | ||||||||||| || || ||||| ||||| || ||||||||| Sbjct 536944 TCGAGTGTGATGGTTTTCCCTGTGAGCGTCTTGACGAAGATCTGCATT 536897 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 404951906382340