Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Habropoda_20laboriosa_20[refseq_20GCF_5F001263275.1_202015-08-13] 27,566 sequences; 296,954,667 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq59 161 1e-34 seq284 104 3e-17 >seq59 Length=4191719 Score = 161 bits (178), Expect = 1e-34 Identities = 202/275 (73%), Gaps = 4/275 (1%) Strand=Plus/Minus Query 62098 CTGAATGGATCCACCATCTGCCATAATCCTATTCTTGATCTCATCATTCCATAATTTTCT 62157 |||||| || || || ||| ||||| ||| || || || | || ||| | | ||| Sbjct 764808 CTGAATAGAACCGTTATTTGCTATAATTTCATTTTTCATGTCCTGATCCCAAAGATCTCT 764749 Query 62158 CTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAAATTCTCCAGACAATACTCT 62217 || || | | | | | | ||| |||||||| |||||||| ||||||||||| ||||| Sbjct 764748 TTCAGTAAGATCCCGTAACAAATGAGGATTAACAACTTGAAACTCTCCAGACAAAACTCT 764689 Query 62218 CCGAGTGTAAATATTACTGGTATACGGTTCCACAGACTCATTATTTCCCAAAATTTGAGC 62277 | || ||||||||| | ||||| ||||| | |||||||||||||| |||||||| || Sbjct 764688 TCTTGTATAAATATTATTAGTATAGGGTTCTATGGACTCATTATTTCCTAAAATTTGCGC 764629 Query 62278 AGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTAAGACCGTATGTTCTG-- 62335 ||| ||||| || ||||||||||| | || ||| |||||||| || ||||| | Sbjct 764628 AGTAGATGCTGTTGGCATAGGTGCAATTAACAAAGAATTTCTAACTCC--ATGTTTAGCA 764571 Query 62336 ATTTTATCTTTTAGAGGTTCCCAATTCCAAAGATC 62370 ||||| || |||| || |||||| ||| | ||| Sbjct 764570 ATTTTTTCCTTTAAAGCAGCCCAATCCCATAAATC 764536 Score = 102 bits (112), Expect = 1e-16 Identities = 242/362 (67%), Gaps = 18/362 (5%) Strand=Plus/Minus Query 62627 GCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTTC---TGACAATT 62683 |||||||||| ||||||||||| | ||| |||||||||| | ||| |||||||| Sbjct 764153 GCTTCTGGAACTGGATAATAATTGACATCAATAATTTTATCCAAATTATAGGTGACAATT 764094 Query 62684 ACTTTGACCACATCCTTC--AGTTTGAGAAAATCAAATCGCCCATCTA-------TTACA 62734 || ||| | ||| ||||| ||||||||| || || ||||| Sbjct 764093 ---TTCGTCACCT--TTCGAAGTTTTTCAAAATCAAAAGTTTTAT-TAGCAGGATTTACA 764040 Query 62735 AACATGTTCAATGCAACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATAT 62794 ||||| |||| |||| || |||| ||| || || || | |||| | | | || Sbjct 764039 AACATATTCACAGCAATTGAAGCCAAATTGCATACAGCAATTTCATCTGGACTGGAGTAC 763980 Query 62795 TGTATTATCTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTC 62854 |||| || || ||||| | ||| ||||||||||| ||||||| |||||| ||||| Sbjct 763979 TGTACAATTTCTGTGCATAAATTGCTACACTTGATTGTTCCTATATTTTGATGATTTGAT 763920 Query 62855 TTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCT 62914 || || || ||| |||||||| ||| | ||||| || ||||||| || | Sbjct 763919 TTACGATTGCAGTGATCTTTATAAAGCATGTAAGGAGTTCCTGTTTCAACTTGGGCCATA 763860 Query 62915 ATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAGATTTGTATCTCTTTTCTCTTTCG 62974 | ||| ||| |||| | | ||| || | | | | ||| ||||| ||||| |||| Sbjct 763859 AGAATAGCTGTCCACAAGTCTCTGGCTTGAACTTGACGTTTATATCTTTTTTCGTTTTCA 763800 Query 62975 TA 62976 || Sbjct 763799 TA 763798 Score = 95.1 bits (104), Expect = 2e-14 Identities = 172/250 (69%), Gaps = 4/250 (2%) Strand=Plus/Minus Query 63446 CTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGAGTAAAC 63505 ||||||||||| || | |||| | ||| ||| | || || ||||| || ||||| Sbjct 762895 CTAGACATTTGCTGTTGCTTAGTACATGCAGCAAAAAGAGTTGGTGAAGCATGTGTAAAA 762836 Query 63506 CATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATATCCCATTGATGAATT 63565 | ||| || | | ||| || || || |||||| ||| ||||| ||| || Sbjct 762835 TAACGTTCTGATAAGAAATTATATGTTTCTATAGCTCTGTCAATATCATCACCATGGATA 762776 Query 63566 CCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTC 63625 | ||||| || | ||||||||||||||| || || ||||| | || | ||| || Sbjct 762775 GCAACTGCAACTCTCATTAACATGTGCTGTGGCCTCTCAACAACTTTTCCATATATCTTT 762716 Query 63626 AACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA--TGAAAAGTCTCGTT 63683 || || ||| | |||| | ||||| ||||||||||| ||||| ||||| |||| | Sbjct 762715 AATAAATAGCTTCTTTCAAGTGTTTTGAAACCAAAATAATTGTAACTGAAA--TCTCTAT 762658 Query 63684 CGTAAATAAT 63693 | ||||| || Sbjct 762657 CATAAATTAT 762648 Score = 91.5 bits (100), Expect = 2e-13 Identities = 118/159 (74%), Gaps = 3/159 (2%) Strand=Plus/Minus Query 62992 TTCGAACTCGTCTCCCCAAACATTGTCCAGTCCAGGACATTCATCCGGACACATCAACGA 63051 ||| || || || |||||||||| || | |||||| |||| | || ||||| || | Sbjct 763504 TTCAAATTCATCACCCCAAACATCATCTAAACCAGGAGATTCGTGTGGGCACATTAAAGT 763445 Query 63052 CCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATA-A 63110 ||| || | ||| |||||||||||||| |||||||||||||| | ||| ||| | Sbjct 763444 CCAAATACCATTTTCCAAAACTCGTTTCATAAAAAGATCAGGAATCCATAAAGC-ATAGA 763386 Query 63111 ATAGATCTCTGGTTCTATGTTCCTCGTTTCCTG-TATTC 63148 ||| ||||| | ||||| ||| || || |||| ||||| Sbjct 763385 ATAATTCTCTTGCTCTATTTTCTTCTTTACCTGTTATTC 763347 Score = 86.0 bits (94), Expect = 8e-12 Identities = 109/149 (73%), Gaps = 2/149 (1%) Strand=Plus/Minus Query 63810 CACTAAATAGtttttttGTTTCTTTGTGTAGATTTGATACGGCTATTCTAGCGGCTAGAA 63869 ||||||| ||| || ||||||||||| ||||| || | || ||||| || |||| | Sbjct 762440 CACTAAAGGTTTTCTTCGTTTCTTTGTGAAGATTGGAGATTGCAATTCTTGCTGCTAATA 762381 Query 63870 TGGCATAATCCGGATGTTGTGTAGTACAAGTGGCTGCTATTTCGGCTGCCAGAGTGTCCA 63929 |||||||| ||||||| ||||| | | ||||| |||| ||||| ||| | || | Sbjct 762380 CAGCATAATCTGGATGTTTGGTAGTCATACTTGCTGCAGTTTCAGCTGCAAGATTATCTA 762321 Query 63930 ATTCTACCGTTGTTACACC--ATTATATA 63956 | || || || || ||||| | |||||| Sbjct 762320 ACTCAACTGTGGTAACACCTGAGTATATA 762292 >seq284 Length=1419496 Score = 104 bits (114), Expect = 3e-17 Identities = 98/125 (78%), Gaps = 0/125 (0%) Strand=Plus/Minus Query 33147 TTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATATTC 33206 ||||| | || ||||| |||||||||||||| || || ||||| ||||| ||||| | | Sbjct 889928 TTAGAAAGGTCTACTTCCTCCACTGTCCAAAAGGAGGCTTCTGCTTTTTTGTACATTTGC 889869 Query 33207 CAGATGTCATGATATTGAATTGGAAAAATAACAAATCTATTTGGATTTTTTGCAAGGATT 33266 || |||||| | |||| || ||||||| |||||||||| |||||||| | || | | Sbjct 889868 CAAATGTCAGGCCATTGGATAGGAAAAACAACAAATCTACGTGGATTTTCTTTTAGCAGT 889809 Query 33267 GGTTC 33271 ||||| Sbjct 889808 GGTTC 889804 Score = 104 bits (114), Expect = 3e-17 Identities = 163/232 (70%), Gaps = 6/232 (3%) Strand=Plus/Minus Query 32457 TTATAAAtttttttAAATCCCAATTCAGAAATCAATCTATCTGCGACAAATTCTATATAT 32516 ||| ||| |||| | || ||||| || |||||| || || |||||||| |||||| Sbjct 890887 TTACAAACCTTTTGGCAACCTAATTCTACAAGCAATCTGTCCGCAACAAATTCAATATAT 890828 Query 32517 GTTTTCATCATTTCACAATTCATTCCTATAAGTTTAACTGGAAGAGCCACAGTAAGAAAT 32576 ||| | || ||| ||||| ||||| | || ||| || | ||| |||| | |||| Sbjct 890827 TGGCACATGAGTTTACAGTTCATGCCTATCATTTCAACGGGTAAAGCGTCAGTTAAAAAT 890768 Query 32577 TCTTGTTCAATAGAGACCGCGTCTGTTATAATAGATCTTACTGTTTCTTCACTCGGTGGA 32636 ||||||||||| |||||||||| | ||||| ||| | || |||| ||| || Sbjct 890767 TCTTGTTCAATTTGGACCGCGTCTTTAATAATTGATGTGAC---GCGTTCATTCGAAGGT 890711 Query 32637 TAC---AATAAATGTTTAAACATCAAACATGCGAAATCGCAGTGTAGACCCT 32685 | | | | ||||||||||| || ||||| |||||||| || | |||| Sbjct 890710 TTCTGTATGATGTGTTTAAACATTAAGCATGCAAAATCGCAATGCAATCCCT 890659 Score = 95.1 bits (104), Expect = 2e-14 Identities = 105/138 (76%), Gaps = 3/138 (2%) Strand=Plus/Minus Query 32315 TTAAAAGTCAACATCTAGAGAAAAATGATTGTCT-TCTTGA--GACATAACTCCCATTTT 32371 |||||||||| ||| | | ||||| | ||| | ||| | ||| |||||| ||| Sbjct 891104 TTAAAAGTCAGCATTAACTGTAAAATTGCTCTCTATTTTGTTTGCCATCACTCCCCATTT 891045 Query 32372 TTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTACCTTCTAATGATATATTTTC 32431 ||| ||||| || || ||| |||||||| || || |||||||| || || |||| ||| Sbjct 891044 TTGATATTCTCCAACTTTTTTCTCGAAAAAGTTCGTCTTACCTTCCAAAGAAATATGTTC 890985 Query 32432 CATGAAATCGAATGGATT 32449 |||||||||||||||||| Sbjct 890984 CATGAAATCGAATGGATT 890967 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633413666253600