Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Habropoda_20laboriosa_20[refseq_20GCF_5F001263275.1_202015-08-13]
27,566 sequences; 296,954,667 total letters
Query= NC_008518.1
Length=174059
Score E
Sequences producing significant alignments: (Bits) Value
seq284 147 2e-30
seq213 118 1e-21
seq366 113 5e-20
>seq284
Length=1419496
Score = 147 bits (162), Expect = 2e-30
Identities = 144/186 (77%), Gaps = 0/186 (0%)
Strand=Plus/Minus
Query 93362 ATGTATGTATCGATTAACAGAGAATACATTTCAGAATGGACATTCTCCATTGCAATTTGG 93421
|| |||||||||||||||| ||| |||||||| || || ||||| |||||||||| |||
Sbjct 890235 ATATATGTATCGATTAACAAAGAGTACATTTCTGAGTGCACATTTTCCATTGCAACTTGA 890176
Query 93422 AATCCGTAGAAACATCTAGCTTCCGTGATCTGCACTTCTTGAGAAAATCTCTCTACGAGA 93481
|| || || || || | || || || || ||||| || || ||||| || || |||
Sbjct 890175 AAGCCATAAAAGCAACGTGCCTCTGTTATTTGCACCTCCTGGCTAAATCGTTCAACAAGA 890116
Query 93482 TTTTCATTGACTATACCATCGGATGCTGCaaaaaaaGCCAATATATGCTTTATAAAATGT 93541
||||||||||| || ||||| || || |||||||| || |||| ||| |||||| | |
Sbjct 890115 TTTTCATTGACAATTCCATCAGAAGCAGCAAAAAATGCTAATACATGTGATATAAATTTT 890056
Query 93542 TTCTCA 93547
||||||
Sbjct 890055 TTCTCA 890050
Score = 127 bits (140), Expect = 2e-24
Identities = 164/225 (73%), Gaps = 1/225 (0%)
Strand=Plus/Minus
Query 93111 AACCTTCGTCTCGTGATATCAACTCATTGCTGAATGTTAAACCTGGTAACAGTCCTCGTT 93170
||||| | |||| || || | ||||| |||||||| | ||||| | ||||||| |
Sbjct 890560 AACCT-CATCTCTAGAAATGAGTTCATTACTGAATGTAAGGCCTGGCATAAGTCCTCTCT 890502
Query 93171 TCTTGAGCCAAAATATTGAAGCAAAACTACCAGaaaaaaaTATACCTTCCACGGCTGCAA 93230
|||| | |||||| || | ||||||||||||| ||| || ||||||||||| || ||||
Sbjct 890501 TCTTTAACCAAAAAATGGCAGCAAAACTACCACTAAAGAAAATACCTTCCACTGCAGCAA 890442
Query 93231 ATGCCACAATACGTTCGGCAAAATTTGCGGAATTACTGCTGATCCATTTTAAAGCCCAAT 93290
|||| | | |||||||| ||| | || | | | | ||||| ||||| |||||||
Sbjct 890441 ATGCAATTACACGTTCGGGAAAGGTAGCAGTTTCATGATTTATCCAATTTAATGCCCAAT 890382
Query 93291 CGGCTTTTTTCTTAATACAAGGTAGTGTTTCGATAGCGTTAAATA 93335
|||||| || || ||| || | |||| || || |||||||
Sbjct 890381 TAGCTTTTCTCGCAACACACGGCAAATTTTCAATCGCATTAAATA 890337
Score = 93.3 bits (102), Expect = 5e-14
Identities = 101/134 (75%), Gaps = 0/134 (0%)
Strand=Plus/Minus
Query 93581 TTTGAAAGATCGACTTCTTCGACAGTCCAAAACGATGCTTCTGCTTTTTTGTACATATCC 93640
|| ||||| || ||||| || || |||||||| || |||||||||||||||||||| | |
Sbjct 889928 TTAGAAAGGTCTACTTCCTCCACTGTCCAAAAGGAGGCTTCTGCTTTTTTGTACATTTGC 889869
Query 93641 CATATGTCTTGATATTGAATTGGAAATATGACAAAACGATTAGGGTTATCTTTTAGTAAC 93700
|| ||||| | |||| || ||||| | ||||| | | || || |||||||| |
Sbjct 889868 CAAATGTCAGGCCATTGGATAGGAAAAACAACAAATCTACGTGGATTTTCTTTTAGCAGT 889809
Query 93701 GGCTCTAGTTGTGG 93714
|| |||| || |||
Sbjct 889808 GGTTCTAATTCTGG 889795
>seq213
Length=741248
Score = 118 bits (130), Expect = 1e-21
Identities = 79/87 (91%), Gaps = 2/87 (2%)
Strand=Plus/Plus
Query 126265 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCC--TCGGGAGC 126322
|| ||||||||||||| |||||||||||||||| ||||| |||||||||| | ||||||
Sbjct 531804 AGCCAGGTTGGCCGAGCGGTCTAAGGCGCCAGACTTAAGTTCTGGTTCCCAATTGGGAGC 531863
Query 126323 GTGGGTTCGAACCCCACACCTGACAAA 126349
|||||||||||||||||||||| ||||
Sbjct 531864 GTGGGTTCGAACCCCACACCTGGCAAA 531890
>seq366
Length=1648964
Score = 113 bits (124), Expect = 5e-20
Identities = 77/84 (92%), Gaps = 2/84 (2%)
Strand=Plus/Plus
Query 126269 AGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCC-TC-GGGAGCGTGG 126326
|||||||||||| |||||||||||||||||||||| |||||||||| || ||||||||||
Sbjct 1392562 AGGTTGGCCGAGCGGTCTAAGGCGCCAGATTTAAGCTCTGGTTCCCGTCTGGGAGCGTGG 1392621
Query 126327 GTTCGAACCCCACACCTGACAAAT 126350
||||||||||||||| | |||||
Sbjct 1392622 GTTCGAACCCCACACTTAGCAAAT 1392645
Score = 113 bits (124), Expect = 5e-20
Identities = 77/84 (92%), Gaps = 2/84 (2%)
Strand=Plus/Plus
Query 126269 AGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCC-TC-GGGAGCGTGG 126326
|||||||||||| |||||||||||||||||||||| |||||||||| || ||||||||||
Sbjct 1392755 AGGTTGGCCGAGCGGTCTAAGGCGCCAGATTTAAGCTCTGGTTCCCGTCTGGGAGCGTGG 1392814
Query 126327 GTTCGAACCCCACACCTGACAAAT 126350
||||||||||||||| | |||||
Sbjct 1392815 GTTCGAACCCCACACTTAGCAAAT 1392838
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 556668919689840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |