Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Habropoda_20laboriosa_20[refseq_20GCF_5F001263275.1_202015-08-13]
27,566 sequences; 296,954,667 total letters
Query= NC_008603.1
Length=321240
Score E
Sequences producing significant alignments: (Bits) Value
seq394 93.3 9e-14
seq227 93.3 9e-14
seq190 91.5 3e-13
seq27 91.5 3e-13
seq46 89.7 1e-12
seq303 87.8 4e-12
>seq394
Length=4544675
Score = 93.3 bits (102), Expect = 9e-14
Identities = 71/83 (86%), Gaps = 1/83 (1%)
Strand=Plus/Minus
Query 142041 CATTAAACGCATGTCTCTGTGGCGCAATGGACAGCGCGTTGGACTTCTAATCCAAAGGTT 142100
||||| || || ||| |||||||||| ||| |||||||||||||||||||||||||||
Sbjct 4443177 CATTACAC-CAAGTCCCTGTGGCGCAGAGGATAGCGCGTTGGACTTCTAATCCAAAGGTC 4443119
Query 142101 GCGGGTTCGACCCCCGCCAGAGA 142123
| |||||||| |||| |||| ||
Sbjct 4443118 GTGGGTTCGATCCCCACCAGGGA 4443096
Score = 89.7 bits (98), Expect = 1e-12
Identities = 64/74 (86%), Gaps = 0/74 (0%)
Strand=Plus/Minus
Query 142050 CATGTCTCTGTGGCGCAATGGACAGCGCGTTGGACTTCTAATCCAAAGGTTGCGGGTTCG 142109
|| ||| |||||||||| ||| ||||||||||||||||||||||||||| | |||||||
Sbjct 4427212 CAAGTCCCTGTGGCGCAGAGGATAGCGCGTTGGACTTCTAATCCAAAGGTCGTGGGTTCG 4427153
Query 142110 ACCCCCGCCAGAGA 142123
| |||| |||| ||
Sbjct 4427152 ATCCCCACCAGGGA 4427139
>seq227
Length=1440398
Score = 93.3 bits (102), Expect = 9e-14
Identities = 68/79 (86%), Gaps = 0/79 (0%)
Strand=Plus/Plus
Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563
|||||| |||||||||||||||||| ||||||||||||| ||||||||||||||||
Sbjct 886284 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 886343
Query 142564 CCCACATCGGGCAGAAGTC 142582
||||| | |||| ||| ||
Sbjct 886344 CCCACGTTGGGCGGAATTC 886362
>seq190
Length=456943
Score = 91.5 bits (100), Expect = 3e-13
Identities = 67/77 (87%), Gaps = 1/77 (1%)
Strand=Plus/Plus
Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563
|||||| |||||||||||||||||| ||||||||||||| ||||||||||||||||
Sbjct 37450 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 37509
Query 142564 CCCACATCGGGCAGAAG 142580
||||| | |||| ||||
Sbjct 37510 CCCACGTTGGGC-GAAG 37525
>seq27
Length=1401505
Score = 91.5 bits (100), Expect = 3e-13
Identities = 64/73 (88%), Gaps = 0/73 (0%)
Strand=Plus/Plus
Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562
||||||| |||||||||||||||||| ||||||||||||| |||||||||||||||
Sbjct 1191810 AGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAG 1191869
Query 142563 CCCCACATCGGGC 142575
|||||| | ||||
Sbjct 1191870 CCCCACGTTGGGC 1191882
>seq46
Length=5050921
Score = 89.7 bits (98), Expect = 1e-12
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563
|||||| |||||||||||||||||| ||||||||||||| ||||||||||||||||
Sbjct 4209975 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 4210034
Query 142564 CCCACATCGGGC 142575
||||| | ||||
Sbjct 4210035 CCCACGTTGGGC 4210046
>seq303
Length=295617
Score = 87.8 bits (96), Expect = 4e-12
Identities = 62/71 (87%), Gaps = 0/71 (0%)
Strand=Plus/Minus
Query 142053 GTCTCTGTGGCGCAATGGACAGCGCGTTGGACTTCTAATCCAAAGGTTGCGGGTTCGACC 142112
||| || ||||||| ||| ||||||||||||||||||||||||||| |||||||||| |
Sbjct 23624 GTCCCTTTGGCGCAGAGGATAGCGCGTTGGACTTCTAATCCAAAGGTCGCGGGTTCGATC 23565
Query 142113 CCCGCCAGAGA 142123
||||| || ||
Sbjct 23564 CCCGCAAGGGA 23554
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1027473778963006
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |