Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Habropoda_20laboriosa_20[refseq_20GCF_5F001263275.1_202015-08-13] 27,566 sequences; 296,954,667 total letters Query= NC_008953.1 Length=3935 Score E Sequences producing significant alignments: (Bits) Value seq139 82.4 2e-12 seq69 80.6 7e-12 >seq139 Length=5215023 Score = 82.4 bits (90), Expect = 2e-12 Identities = 113/158 (72%), Gaps = 0/158 (0%) Strand=Plus/Plus Query 3323 ACATGACGAACCCCATGAAGCGAGTCTTTCCAACAATCACTCGATGTACTTTTCACAAAT 3382 ||| || | |||| ||| || || || || | | ||| ||| || |||||||||| Sbjct 2769290 ACAGGATGGACCCTATGTCACGGGTGTTCCCGAAGGTTACTAAATGCACCTTTCACAAAT 2769349 Query 3383 ACGGTCCTTCGGGCTCCCTGGAAAACTACGAGGGACTCTGCATCCTCCCGGAGAACGTGG 3442 | ||| | || || | || | || | || || |||||| | || ||| |||| | | Sbjct 2769350 ATGGTGCGTCCGGTACGGTGCAGAAATTTGATGGGCTCTGCGTGCTGCCGTTGAACATCG 2769409 Query 3443 TCAACGAGAAGATCTACATTTTCCTCTGGTTCTGGTTC 3480 |||||||||||||||| | ||||| |||||||||||| Sbjct 2769410 TCAACGAGAAGATCTATGTGTTCCTATGGTTCTGGTTC 2769447 >seq69 Length=1116570 Score = 80.6 bits (88), Expect = 7e-12 Identities = 106/147 (72%), Gaps = 0/147 (0%) Strand=Plus/Minus Query 3345 AGTCTTTCCAACAATCACTCGATGTACTTTTCACAAATACGGTCCTTCGGGCTCCCTGGA 3404 ||| || ||| | |||| |||||| || ||||||| |||| |||| || ||| | | Sbjct 554169 AGTGTTCCCACGAGTCACCAAATGTACCTTCCACAAATTCGGTGCTTCTGGGTCCATTCA 554110 Query 3405 AAACTACGAGGGACTCTGCATCCTCCCGGAGAACGTGGTCAACGAGAAGATCTACATTTT 3464 ||| | ||| | || || ||||| | ||| | ||||||| ||||||||||| || Sbjct 554109 AAAGTTCGACGCCCTGTGTGTCCTCGCTCTCAACATCCTCAACGAAAAGATCTACATCTT 554050 Query 3465 CCTCTGGTTCTGGTTCTACGTGCTAGC 3491 | | |||||||||||| ||| || || Sbjct 554049 CTTATGGTTCTGGTTCATCGTTCTGGC 554023 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 12476237241000