Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Habropoda_20laboriosa_20[refseq_20GCF_5F001263275.1_202015-08-13]
27,566 sequences; 296,954,667 total letters
Query= NC_009503.1
Length=124121
Score E
Sequences producing significant alignments: (Bits) Value
seq65 95.1 1e-14
seq49 86.0 5e-12
>seq65
Length=771584
Score = 95.1 bits (104), Expect = 1e-14
Identities = 160/229 (70%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 33901 CCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCC 33960
||||||| || |||| ||||| || || ||| ||| || || |||||||||||||
Sbjct 538492 CCTCCTCGGAGTCGCAACACCAAGTGCAGTGTGGACTCTTTTTGGATGTTGTAATCTGAA 538433
Query 33961 A-ATTGTCGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGG 34019
| | || ||| | || ||||| || ||||| |||||||||| |||||||| || ||
Sbjct 538432 AGAGTG-CGCCCATCTTCCAACTGTTTGCCAGCAAATATCAAACGCTGCTGGTCGGGAGG 538374
Query 34020 CACGCTCTCTTTGTCCATAATTTTTTGCTTAATGGAACTCACACTATCAGTAGATTCGCA 34079
| | ||||||||| ||| || ||||| | | | | || | || ||
Sbjct 538373 GATTCCCTCTTTGTCTTGAATCTTAGCCTTAACGTTATCTATTGTGTCTGAAGCCTCAAC 538314
Query 34080 TTCGACCGTTATTGTTTTTCCGGTTAGTGTTTTCACAAAGATTTGCATT 34128
||| | || || ||||| || || |||||||| |||||||| ||||||
Sbjct 538313 TTCCAGGGTGATGGTTTTCCCCGTGAGTGTTTTGACAAAGATCTGCATT 538265
>seq49
Length=1886280
Score = 86.0 bits (94), Expect = 5e-12
Identities = 161/233 (69%), Gaps = 8/233 (3%)
Strand=Plus/Plus
Query 33900 ACCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGC 33959
||| |||| || ||||| || |||||||| || ||||||||||| || || ||||
Sbjct 1162002 ACCACCTCGAAGTCGCAGAACAAGATGAAGAGTTGATTCCTTCTGAATATTATAGTCTG- 1162060
Query 33960 CAATTGT-CGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCG 34018
||| ||| || |||| || | ||||| || || || |||| | ||| ||||| |
Sbjct 1162061 CAAGTGTGCGTCCGTCTTCAAGCTGCTTACCAGCGAAAATCAATCTCTGTTGATCAGGTG 1162120
Query 34019 GCACGCTCTCTTTGTCCATAATTTTTTGCTTAATGGAACTCACA---CTATCAGTAGATT 34075
| | | || |||||| ||||||| ||| | | || || |||||| || ||
Sbjct 1162121 GAATACCTTCCTTGTCCTGAATTTTTGCCTTCA---CATTCTCAATTGTATCAGAAGCTT 1162177
Query 34076 CGCATTCGACCGTTATTGTTTTTCCGGTTAGTGTTTTCACAAAGATTTGCATT 34128
| ||| | || ||||| ||||| || || ||||| || || |||||||||
Sbjct 1162178 CAACTTCTAAAGTGATTGTCTTTCCCGTGAGAGTTTTAACGAAAATTTGCATT 1162230
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 396929002667932
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |