Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Habropoda_20laboriosa_20[refseq_20GCF_5F001263275.1_202015-08-13] 27,566 sequences; 296,954,667 total letters Query= NC_009503.1 Length=124121 Score E Sequences producing significant alignments: (Bits) Value seq65 95.1 1e-14 seq49 86.0 5e-12 >seq65 Length=771584 Score = 95.1 bits (104), Expect = 1e-14 Identities = 160/229 (70%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 33901 CCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCC 33960 ||||||| || |||| ||||| || || ||| ||| || || ||||||||||||| Sbjct 538492 CCTCCTCGGAGTCGCAACACCAAGTGCAGTGTGGACTCTTTTTGGATGTTGTAATCTGAA 538433 Query 33961 A-ATTGTCGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGG 34019 | | || ||| | || ||||| || ||||| |||||||||| |||||||| || || Sbjct 538432 AGAGTG-CGCCCATCTTCCAACTGTTTGCCAGCAAATATCAAACGCTGCTGGTCGGGAGG 538374 Query 34020 CACGCTCTCTTTGTCCATAATTTTTTGCTTAATGGAACTCACACTATCAGTAGATTCGCA 34079 | | ||||||||| ||| || ||||| | | | | || | || || Sbjct 538373 GATTCCCTCTTTGTCTTGAATCTTAGCCTTAACGTTATCTATTGTGTCTGAAGCCTCAAC 538314 Query 34080 TTCGACCGTTATTGTTTTTCCGGTTAGTGTTTTCACAAAGATTTGCATT 34128 ||| | || || ||||| || || |||||||| |||||||| |||||| Sbjct 538313 TTCCAGGGTGATGGTTTTCCCCGTGAGTGTTTTGACAAAGATCTGCATT 538265 >seq49 Length=1886280 Score = 86.0 bits (94), Expect = 5e-12 Identities = 161/233 (69%), Gaps = 8/233 (3%) Strand=Plus/Plus Query 33900 ACCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGC 33959 ||| |||| || ||||| || |||||||| || ||||||||||| || || |||| Sbjct 1162002 ACCACCTCGAAGTCGCAGAACAAGATGAAGAGTTGATTCCTTCTGAATATTATAGTCTG- 1162060 Query 33960 CAATTGT-CGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCG 34018 ||| ||| || |||| || | ||||| || || || |||| | ||| ||||| | Sbjct 1162061 CAAGTGTGCGTCCGTCTTCAAGCTGCTTACCAGCGAAAATCAATCTCTGTTGATCAGGTG 1162120 Query 34019 GCACGCTCTCTTTGTCCATAATTTTTTGCTTAATGGAACTCACA---CTATCAGTAGATT 34075 | | | || |||||| ||||||| ||| | | || || |||||| || || Sbjct 1162121 GAATACCTTCCTTGTCCTGAATTTTTGCCTTCA---CATTCTCAATTGTATCAGAAGCTT 1162177 Query 34076 CGCATTCGACCGTTATTGTTTTTCCGGTTAGTGTTTTCACAAAGATTTGCATT 34128 | ||| | || ||||| ||||| || || ||||| || || ||||||||| Sbjct 1162178 CAACTTCTAAAGTGATTGTCTTTCCCGTGAGAGTTTTAACGAAAATTTGCATT 1162230 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 396929002667932